Gene annotation
Transcriptome id Sobic.003G338900.1
Synonym Sb03g038300
Functional annotation expressed protein
UniProt A0A1W0W059
Pfam -
Panther DB PTHR34945 PTHR34945:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38500 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os01g60800.1 : expressed protein
MaizeGDB (Corn) Zm00025a039763
Brachypodium KQK10367
Barley HORVU3Hr1G081250.1
Wheat TraesCS3B02G377100 , TraesCS3D02G339000 , TraesCS3A02G345000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G189700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
2 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
4 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
5 Sobic.001G476400 - -
6 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.001G290400 no apical meristem protein, putative, expressed -
8 Sobic.003G296700 protein kinase domain containing protein, expressed -
9 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
12 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
13 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
14 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
15 Sobic.003G012800 AP2 domain containing protein, expressed -
16 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
17 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.004G053200 Cupin domain containing protein, expressed -
19 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
20 Sobic.002G335200 expressed protein -


Gene co-expression network
sample Sobic003G338900 Sobic003G338900 Sobic001G189700 Sobic001G189700 Sobic003G338900--Sobic001G189700 Sobic010G076600 Sobic010G076600 Sobic003G338900--Sobic010G076600 Sobic009G217600 Sobic009G217600 Sobic003G338900--Sobic009G217600 Sobic002G379400 Sobic002G379400 Sobic003G338900--Sobic002G379400 Sobic001G476400 Sobic001G476400 Sobic003G338900--Sobic001G476400 Sobic001G341600 Sobic001G341600 Sobic003G338900--Sobic001G341600 Sobic001G290400 Sobic001G290400 Sobic003G338900--Sobic001G290400 Sobic003G296700 Sobic003G296700 Sobic003G338900--Sobic003G296700 Sobic001G473900 Sobic001G473900 Sobic003G338900--Sobic001G473900 Sobic004G053200 Sobic004G053200 Sobic001G189700--Sobic004G053200 Sobic001G189700--Sobic003G338900 Sobic002G080000 Sobic002G080000 Sobic001G189700--Sobic002G080000 Sobic004G280800 Sobic004G280800 Sobic001G189700--Sobic004G280800 Sobic001G189700--Sobic001G290400 Sobic001G403600 Sobic001G403600 Sobic001G189700--Sobic001G403600 Sobic003G012800 Sobic003G012800 Sobic001G189700--Sobic003G012800 Sobic009G044400 Sobic009G044400 Sobic001G189700--Sobic009G044400 Sobic005G139700 Sobic005G139700 Sobic001G189700--Sobic005G139700 Sobic006G184400 Sobic006G184400 Sobic010G076600--Sobic006G184400 Sobic001G209800 Sobic001G209800 Sobic010G076600--Sobic001G209800 Sobic010G076600--Sobic001G476400 Sobic010G076600--Sobic001G473900 Sobic010G076600--Sobic009G217600 Sobic010G076600--Sobic003G338900 Sobic008G036000 Sobic008G036000 Sobic010G076600--Sobic008G036000 Sobic006G095600 Sobic006G095600 Sobic010G076600--Sobic006G095600 Sobic010G076600--Sobic003G296700 Sobic001G441100 Sobic001G441100 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic001G077400 Sobic001G077400 Sobic009G217600--Sobic001G077400 Sobic001G035000 Sobic001G035000 Sobic009G217600--Sobic001G035000 Sobic004G280900 Sobic004G280900 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic005G037000 Sobic005G037000 Sobic009G217600--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic009G217600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic009G217600--Sobic002G278500 Sobic004G025000 Sobic004G025000 Sobic002G379400--Sobic004G025000 Sobic002G330300 Sobic002G330300 Sobic002G379400--Sobic002G330300 Sobic002G379400--Sobic003G338900 Sobic008G016900 Sobic008G016900 Sobic002G379400--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G379400--Sobic010G228000 Sobic002G118600 Sobic002G118600 Sobic002G379400--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G379400--Sobic006G263100 Sobic001G436000 Sobic001G436000 Sobic002G379400--Sobic001G436000 Sobic002G294700 Sobic002G294700 Sobic002G379400--Sobic002G294700 Sobic001G063600 Sobic001G063600 Sobic001G476400--Sobic001G063600 Sobic001G051600 Sobic001G051600 Sobic001G476400--Sobic001G051600 Sobic001G476400--Sobic001G473900 Sobic001G476400--Sobic010G076600 Sobic001G081600 Sobic001G081600 Sobic001G476400--Sobic001G081600 Sobic010G080400 Sobic010G080400 Sobic001G476400--Sobic010G080400 Sobic001G476400--Sobic006G095600 Sobic004G283300 Sobic004G283300 Sobic001G476400--Sobic004G283300 Sobic001G489600 Sobic001G489600 Sobic001G476400--Sobic001G489600 Sobic001G341600--Sobic009G217600 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G341600--Sobic001G077400 Sobic001G341600--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic001G341600--Sobic002G140300 Sobic001G341600--Sobic003G353800 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic001G290400--Sobic002G118600 Sobic001G290400--Sobic002G294700 Sobic001G051800 Sobic001G051800 Sobic001G290400--Sobic001G051800 Sobic001G290400--Sobic004G053200 Sobic001G290400--Sobic003G338900 Sobic001G290400--Sobic001G473900 Sobic001G290400--Sobic010G228000 Sobic001G290400--Sobic005G139700 Sobic001G290400--Sobic001G538866 Sobic001G516600 Sobic001G516600 Sobic003G296700--Sobic001G516600 Sobic009G208800 Sobic009G208800 Sobic003G296700--Sobic009G208800 Sobic009G220200 Sobic009G220200 Sobic003G296700--Sobic009G220200 Sobic003G296700--Sobic001G341600 Sobic003G296700--Sobic009G217600 Sobic003G296700--Sobic010G076600 Sobic003G296700--Sobic006G095600 Sobic002G374100 Sobic002G374100 Sobic003G296700--Sobic002G374100 Sobic003G296700--Sobic002G294700 Sobic001G473900--Sobic001G476400 Sobic001G473900--Sobic010G076600 Sobic002G203000 Sobic002G203000 Sobic001G473900--Sobic002G203000 Sobic009G071800 Sobic009G071800 Sobic001G473900--Sobic009G071800 Sobic001G077700 Sobic001G077700 Sobic001G473900--Sobic001G077700 Sobic001G473900--Sobic006G095600 Sobic001G473900--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic001G473900--Sobic003G268700 Sobic002G248100 Sobic002G248100 Sobic001G473900--Sobic002G248100
Octagon: transcription factors


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