Gene annotation
Transcriptome id Sobic.003G296700.1
Synonym Sb03g034710
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6Q631
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF106
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G24550 : proline extensin-like receptor kinase 1
RAP-DB (Rice) LOC_Os01g54700.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a003642 , Zm00025a027598 , Zm00025a042394
Brachypodium PNT70918 , KQK18402 , PNT75949 , KQK12952 , KQK12953 , KQK12954 , KQK12955
Barley HORVU3Hr1G071830.21 , HORVU3Hr1G071830.20 , HORVU0Hr1G013830.3 , HORVU0Hr1G013830.2 , HORVU0Hr1G013830.1 , HORVU0Hr1G013830.7 , HORVU0Hr1G013830.6 , HORVU0Hr1G013830.5 , HORVU0Hr1G013830.4 , HORVU0Hr1G013830.8 , HORVU3Hr1G071830.18 , HORVU3Hr1G071830.19 , HORVU3Hr1G071830.16 , HORVU3Hr1G071830.17 , HORVU3Hr1G071830.15 , HORVU3Hr1G071830.12 , HORVU3Hr1G071830.13 , HORVU3Hr1G071830.10 , HORVU3Hr1G071830.11 , HORVU1Hr1G076570.2 , HORVU1Hr1G076570.3 , HORVU1Hr1G076570.4 , HORVU3Hr1G071830.8 , HORVU3Hr1G071830.9 , HORVU3Hr1G071830.4 , HORVU3Hr1G071830.5 , HORVU3Hr1G071830.6 , HORVU3Hr1G071830.7 , HORVU3Hr1G071830.1 , HORVU3Hr1G071830.2 , HORVU3Hr1G071830.3 , HORVU3Hr1G071830.14
Wheat TraesCS1B02G350100 , TraesCS3A02G290300 , TraesCS1D02G339600 , TraesCS3B02G325100 , TraesCS3B02G325100 , TraesCS1B02G001500 , TraesCS5A02G411300 , TraesCS3A02G003900 , TraesCS3D02G290100 , TraesCS3D02G290100 , TraesCS3D02G005400 , TraesCS3D02G005400 , TraesCS5B02G415000 , TraesCS5B02G415000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
2 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
3 Sobic.009G220200 exostosin family domain containing protein, expressed -
4 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
5 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
6 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
8 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
10 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
11 Sobic.003G338900 expressed protein -
12 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
13 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
14 Sobic.010G080400 AP2 domain containing protein, expressed -
15 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
16 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
17 Sobic.007G057100 expressed protein -
18 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
19 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
20 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic003G296700 Sobic003G296700 Sobic001G516600 Sobic001G516600 Sobic003G296700--Sobic001G516600 Sobic009G208800 Sobic009G208800 Sobic003G296700--Sobic009G208800 Sobic009G220200 Sobic009G220200 Sobic003G296700--Sobic009G220200 Sobic001G341600 Sobic001G341600 Sobic003G296700--Sobic001G341600 Sobic009G217600 Sobic009G217600 Sobic003G296700--Sobic009G217600 Sobic010G076600 Sobic010G076600 Sobic003G296700--Sobic010G076600 Sobic006G095600 Sobic006G095600 Sobic003G296700--Sobic006G095600 Sobic002G374100 Sobic002G374100 Sobic003G296700--Sobic002G374100 Sobic002G294700 Sobic002G294700 Sobic003G296700--Sobic002G294700 Sobic001G173300 Sobic001G173300 Sobic001G516600--Sobic001G173300 Sobic007G151100 Sobic007G151100 Sobic001G516600--Sobic007G151100 Sobic003G037800 Sobic003G037800 Sobic001G516600--Sobic003G037800 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G532200 Sobic001G532200 Sobic001G516600--Sobic001G532200 Sobic006G131400 Sobic006G131400 Sobic001G516600--Sobic006G131400 Sobic008G177800 Sobic008G177800 Sobic001G516600--Sobic008G177800 Sobic002G245100 Sobic002G245100 Sobic001G516600--Sobic002G245100 Sobic009G208800--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G208800--Sobic004G257300 Sobic009G208800--Sobic009G220200 Sobic009G208800--Sobic003G296700 Sobic009G208800--Sobic001G516600 Sobic007G057100 Sobic007G057100 Sobic009G208800--Sobic007G057100 Sobic009G208800--Sobic002G294700 Sobic005G231700 Sobic005G231700 Sobic009G208800--Sobic005G231700 Sobic009G208800--Sobic008G177800 Sobic009G220200--Sobic009G208800 Sobic009G220200--Sobic003G296700 Sobic001G051800 Sobic001G051800 Sobic009G220200--Sobic001G051800 Sobic009G220200--Sobic001G516600 Sobic009G220200--Sobic001G173300 Sobic009G220200--Sobic004G257300 Sobic009G220200--Sobic002G374100 Sobic002G362900 Sobic002G362900 Sobic009G220200--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic009G220200--Sobic007G188100 Sobic001G341600--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G341600--Sobic001G441100 Sobic001G035000 Sobic001G035000 Sobic001G341600--Sobic001G035000 Sobic001G077400 Sobic001G077400 Sobic001G341600--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G341600--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic001G209800 Sobic001G209800 Sobic009G217600--Sobic001G209800 Sobic005G037000 Sobic005G037000 Sobic009G217600--Sobic005G037000 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500 Sobic006G184400 Sobic006G184400 Sobic010G076600--Sobic006G184400 Sobic010G076600--Sobic001G209800 Sobic001G476400 Sobic001G476400 Sobic010G076600--Sobic001G476400 Sobic001G473900 Sobic001G473900 Sobic010G076600--Sobic001G473900 Sobic010G076600--Sobic009G217600 Sobic003G338900 Sobic003G338900 Sobic010G076600--Sobic003G338900 Sobic008G036000 Sobic008G036000 Sobic010G076600--Sobic008G036000 Sobic010G076600--Sobic006G095600 Sobic010G076600--Sobic003G296700 Sobic001G489600 Sobic001G489600 Sobic006G095600--Sobic001G489600 Sobic002G203000 Sobic002G203000 Sobic006G095600--Sobic002G203000 Sobic001G051600 Sobic001G051600 Sobic006G095600--Sobic001G051600 Sobic001G077700 Sobic001G077700 Sobic006G095600--Sobic001G077700 Sobic009G071800 Sobic009G071800 Sobic006G095600--Sobic009G071800 Sobic006G095600--Sobic007G057100 Sobic004G084100 Sobic004G084100 Sobic006G095600--Sobic004G084100 Sobic006G095600--Sobic001G473900 Sobic006G095600--Sobic001G476400 Sobic002G374100--Sobic002G294700 Sobic010G246000 Sobic010G246000 Sobic002G374100--Sobic010G246000 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic010G228000 Sobic010G228000 Sobic002G374100--Sobic010G228000 Sobic004G036600 Sobic004G036600 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic002G374100--Sobic008G177800 Sobic002G118600 Sobic002G118600 Sobic002G374100--Sobic002G118600 Sobic002G294700--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G294700--Sobic010G234600 Sobic006G231100 Sobic006G231100 Sobic002G294700--Sobic006G231100 Sobic002G294700--Sobic002G374100 Sobic004G286600 Sobic004G286600 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic002G294700--Sobic010G246000 Sobic002G294700--Sobic004G036600 Sobic002G294700--Sobic002G278500
Octagon: transcription factors


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