Gene annotation
Transcriptome id Sobic.010G228000.1
Synonym Sb10g027140
Functional annotation Protein kinase domain containing protein, expressed
UniProt C5Z7T6
Pfam PF00069
Panther DB PTHR27006 PTHR27006:SF22
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G16670 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g46330.1 : Protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041914
Brachypodium KQK17128
Barley HORVU0Hr1G015530.4 , HORVU0Hr1G015530.5 , HORVU0Hr1G015530.6 , HORVU0Hr1G015530.7 , HORVU0Hr1G015530.1 , HORVU0Hr1G015530.2 , HORVU0Hr1G015530.3
Wheat TraesCS6B02G167900 , TraesCS6A02G139400 , TraesCS6A02G139400 , TraesCS6D02G129900
Populus PNS96453 , PNS96452 , PNS96451


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
2 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
3 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
4 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
5 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
6 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
7 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
9 Sobic.001G290400 no apical meristem protein, putative, expressed -
10 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
11 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
12 Sobic.001G206400 fiber protein Fb34, putative, expressed -
13 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.006G263100 expressed protein -
15 Sobic.001G403600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
16 Sobic.006G131400 expressed protein -
17 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
18 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
20 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -


Gene co-expression network
sample Sobic010G228000 Sobic010G228000 Sobic002G374100 Sobic002G374100 Sobic010G228000--Sobic002G374100 Sobic002G118600 Sobic002G118600 Sobic010G228000--Sobic002G118600 Sobic007G188100 Sobic007G188100 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic002G330300 Sobic002G330300 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic002G374100--Sobic002G294700 Sobic002G374100--Sobic010G246000 Sobic001G516600 Sobic001G516600 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic002G374100--Sobic010G228000 Sobic004G036600 Sobic004G036600 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic008G177800 Sobic008G177800 Sobic002G374100--Sobic008G177800 Sobic002G374100--Sobic002G118600 Sobic001G147200 Sobic001G147200 Sobic002G118600--Sobic001G147200 Sobic001G341600 Sobic001G341600 Sobic002G118600--Sobic001G341600 Sobic003G341100 Sobic003G341100 Sobic002G118600--Sobic003G341100 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic002G118600--Sobic001G290400 Sobic007G011000 Sobic007G011000 Sobic002G118600--Sobic007G011000 Sobic001G538866 Sobic001G538866 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300 Sobic007G188100--Sobic010G228000 Sobic002G362900 Sobic002G362900 Sobic007G188100--Sobic002G362900 Sobic007G188100--Sobic002G353400 Sobic007G188100--Sobic002G374100 Sobic004G259500 Sobic004G259500 Sobic007G188100--Sobic004G259500 Sobic008G016900 Sobic008G016900 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic010G062800 Sobic010G062800 Sobic007G188100--Sobic010G062800 Sobic007G188100--Sobic002G118600 Sobic002G294700--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G294700--Sobic010G234600 Sobic006G231100 Sobic006G231100 Sobic002G294700--Sobic006G231100 Sobic002G294700--Sobic002G374100 Sobic004G286600 Sobic004G286600 Sobic002G294700--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic002G294700--Sobic001G077700 Sobic002G294700--Sobic010G246000 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic002G330300--Sobic008G016900 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic002G330300--Sobic010G228000 Sobic002G330300--Sobic007G011000 Sobic004G025000 Sobic004G025000 Sobic002G330300--Sobic004G025000 Sobic002G330300--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G330300--Sobic006G263100 Sobic002G330300--Sobic007G188100 Sobic004G280800--Sobic010G228000 Sobic004G280800--Sobic006G263100 Sobic004G280800--Sobic002G118600 Sobic004G280800--Sobic001G290400 Sobic003G338900 Sobic003G338900 Sobic004G280800--Sobic003G338900 Sobic004G280800--Sobic004G025000 Sobic004G280800--Sobic007G011000 Sobic004G053200 Sobic004G053200 Sobic004G280800--Sobic004G053200 Sobic001G189700 Sobic001G189700 Sobic004G280800--Sobic001G189700 Sobic010G246000--Sobic002G294700 Sobic010G246000--Sobic002G374100 Sobic003G019200 Sobic003G019200 Sobic010G246000--Sobic003G019200 Sobic010G246000--Sobic001G147200 Sobic010G245800 Sobic010G245800 Sobic010G246000--Sobic010G245800 Sobic010G246000--Sobic008G177800 Sobic010G246000--Sobic002G354900 Sobic010G246000--Sobic010G234600 Sobic010G246000--Sobic004G036600 Sobic002G379400--Sobic004G025000 Sobic002G379400--Sobic002G330300 Sobic002G379400--Sobic003G338900 Sobic002G379400--Sobic008G016900 Sobic002G379400--Sobic010G228000 Sobic002G379400--Sobic002G118600 Sobic002G379400--Sobic006G263100 Sobic001G436000 Sobic001G436000 Sobic002G379400--Sobic001G436000 Sobic002G379400--Sobic002G294700 Sobic001G290400--Sobic002G118600 Sobic001G290400--Sobic002G294700 Sobic001G051800 Sobic001G051800 Sobic001G290400--Sobic001G051800 Sobic001G290400--Sobic004G053200 Sobic001G290400--Sobic003G338900 Sobic001G473900 Sobic001G473900 Sobic001G290400--Sobic001G473900 Sobic001G290400--Sobic010G228000 Sobic005G139700 Sobic005G139700 Sobic001G290400--Sobic005G139700 Sobic001G290400--Sobic001G538866
Octagon: transcription factors


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