Gene annotation
Transcriptome id Sobic.003G019200.1
Synonym Sb03g001890
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5XL20
Pfam -
Panther DB PTHR33834 PTHR33834:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31090 : -
RAP-DB (Rice) LOC_Os01g11600.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK03297
Barley -
Wheat TraesCS3A02G140700 , TraesCS3B02G163900 , TraesCS3D02G146400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
3 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
4 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
5 Sobic.007G198100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane protein, putative, expressed -
6 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
7 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
8 Sobic.010G224200 MYB family transcription factor, putative, expressed -
9 Sobic.008G111100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
10 Sobic.001G538866 - -
11 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
12 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.002G356101 - -
15 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
16 Sobic.007G137700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
17 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
18 Sobic.001G290400 no apical meristem protein, putative, expressed -
19 Sobic.002G423300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G206400 fiber protein Fb34, putative, expressed -


Gene co-expression network
sample Sobic003G019200 Sobic003G019200 Sobic010G246000 Sobic010G246000 Sobic003G019200--Sobic010G246000 Sobic001G147200 Sobic001G147200 Sobic003G019200--Sobic001G147200 Sobic009G200700 Sobic009G200700 Sobic003G019200--Sobic009G200700 Sobic001G399100 Sobic001G399100 Sobic003G019200--Sobic001G399100 Sobic007G198100 Sobic007G198100 Sobic003G019200--Sobic007G198100 Sobic002G374100 Sobic002G374100 Sobic003G019200--Sobic002G374100 Sobic003G429300 Sobic003G429300 Sobic003G019200--Sobic003G429300 Sobic010G224200 Sobic010G224200 Sobic003G019200--Sobic010G224200 Sobic008G111100 Sobic008G111100 Sobic003G019200--Sobic008G111100 Sobic002G294700 Sobic002G294700 Sobic010G246000--Sobic002G294700 Sobic010G246000--Sobic002G374100 Sobic010G246000--Sobic003G019200 Sobic010G246000--Sobic001G147200 Sobic010G245800 Sobic010G245800 Sobic010G246000--Sobic010G245800 Sobic008G177800 Sobic008G177800 Sobic010G246000--Sobic008G177800 Sobic002G354900 Sobic002G354900 Sobic010G246000--Sobic002G354900 Sobic010G234600 Sobic010G234600 Sobic010G246000--Sobic010G234600 Sobic004G036600 Sobic004G036600 Sobic010G246000--Sobic004G036600 Sobic001G147200--Sobic003G019200 Sobic001G147200--Sobic010G246000 Sobic002G118600 Sobic002G118600 Sobic001G147200--Sobic002G118600 Sobic010G204300 Sobic010G204300 Sobic001G147200--Sobic010G204300 Sobic006G228300 Sobic006G228300 Sobic001G147200--Sobic006G228300 Sobic001G147200--Sobic001G399100 Sobic001G538866 Sobic001G538866 Sobic001G147200--Sobic001G538866 Sobic001G147200--Sobic002G374100 Sobic006G263100 Sobic006G263100 Sobic001G147200--Sobic006G263100 Sobic002G140300 Sobic002G140300 Sobic009G200700--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic009G200700--Sobic009G036100 Sobic003G324400 Sobic003G324400 Sobic009G200700--Sobic003G324400 Sobic002G356101 Sobic002G356101 Sobic009G200700--Sobic002G356101 Sobic006G165100 Sobic006G165100 Sobic009G200700--Sobic006G165100 Sobic001G040200 Sobic001G040200 Sobic009G200700--Sobic001G040200 Sobic009G129000 Sobic009G129000 Sobic009G200700--Sobic009G129000 Sobic006G230500 Sobic006G230500 Sobic009G200700--Sobic006G230500 Sobic001G258300 Sobic001G258300 Sobic009G200700--Sobic001G258300 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic010G107100 Sobic010G107100 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic001G399100--Sobic003G019200 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic005G229700 Sobic005G229700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic007G198100--Sobic009G033700 Sobic007G198100--Sobic010G086200 Sobic007G198100--Sobic002G356101 Sobic007G198100--Sobic009G200700 Sobic003G037800 Sobic003G037800 Sobic007G198100--Sobic003G037800 Sobic007G198100--Sobic003G019200 Sobic001G281400 Sobic001G281400 Sobic007G198100--Sobic001G281400 Sobic009G143400 Sobic009G143400 Sobic007G198100--Sobic009G143400 Sobic010G213400 Sobic010G213400 Sobic007G198100--Sobic010G213400 Sobic002G374100--Sobic002G294700 Sobic002G374100--Sobic010G246000 Sobic001G516600 Sobic001G516600 Sobic002G374100--Sobic001G516600 Sobic002G374100--Sobic002G354900 Sobic010G228000 Sobic010G228000 Sobic002G374100--Sobic010G228000 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic002G374100--Sobic008G177800 Sobic002G374100--Sobic002G118600 Sobic007G171000 Sobic007G171000 Sobic003G429300--Sobic007G171000 Sobic006G179500 Sobic006G179500 Sobic003G429300--Sobic006G179500 Sobic003G429300--Sobic008G111100 Sobic002G224100 Sobic002G224100 Sobic003G429300--Sobic002G224100 Sobic003G429300--Sobic003G019200 Sobic002G195900 Sobic002G195900 Sobic003G429300--Sobic002G195900 Sobic003G429300--Sobic006G228300 Sobic010G200700 Sobic010G200700 Sobic003G429300--Sobic010G200700 Sobic002G359300 Sobic002G359300 Sobic003G429300--Sobic002G359300 Sobic010G224200--Sobic003G019200 Sobic002G249000 Sobic002G249000 Sobic010G224200--Sobic002G249000 Sobic009G177800 Sobic009G177800 Sobic010G224200--Sobic009G177800 Sobic004G058000 Sobic004G058000 Sobic010G224200--Sobic004G058000 Sobic010G224200--Sobic008G111100 Sobic002G423300 Sobic002G423300 Sobic010G224200--Sobic002G423300 Sobic004G307000 Sobic004G307000 Sobic010G224200--Sobic004G307000 Sobic004G050000 Sobic004G050000 Sobic010G224200--Sobic004G050000 Sobic010G224200--Sobic010G107100 Sobic008G111100--Sobic009G177800 Sobic008G111100--Sobic003G429300 Sobic008G111100--Sobic004G307000 Sobic008G111100--Sobic003G019200 Sobic009G155200 Sobic009G155200 Sobic008G111100--Sobic009G155200 Sobic008G111100--Sobic007G171000 Sobic008G111100--Sobic002G195900 Sobic008G111100--Sobic010G224200 Sobic008G111100--Sobic002G423300
Octagon: transcription factors


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