Gene annotation
Transcriptome id Sobic.002G423300.1
Synonym BOS1, MYB108, AtMYB108, Sb02g043420
Functional annotation MYB family transcription factor, putative, expressed
UniProt Q8S3Y6 , A0A1B6QGD9
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF460
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49620 : myb domain protein 78
RAP-DB (Rice) LOC_Os07g48870.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023641 , Zm00025a017623 , Zm00025a028009 , Zm00025a054415 , Zm00025a038844 , Zm00025a047090 , Zm00025a035541 , Zm00025a036037 , Zm00025a006594 , Zm00025a025444 , Zm00025a029124 , Zm00025a055298 , Zm00025a055299 , Zm00025a041179 , Zm00025a015471 , Zm00025a013941 , Zm00025a040887 , Zm00025a052506 , Zm00025a044484 , Zm00025a004179 , Zm00025a011116 , Zm00025a002214
Brachypodium KQK07738 , KQK04064 , KQK02514 , KQJ86560 , KQK11803 , KQK11802 , KQK21947 , KQK11806 , KQK11805 , KQK11804 , PNT73697 , PNT73696 , KQK09222 , KQJ90325
Barley HORVU0Hr1G006810.2 , HORVU0Hr1G006810.1 , HORVU4Hr1G082610.1 , HORVU4Hr1G082610.4 , HORVU4Hr1G049630.2 , HORVU4Hr1G049630.1 , HORVU2Hr1G120340.21 , HORVU2Hr1G120340.20 , HORVU2Hr1G120340.23 , HORVU2Hr1G120340.22 , HORVU2Hr1G120340.25 , HORVU2Hr1G120340.24 , HORVU2Hr1G120340.26 , HORVU2Hr1G120340.29 , HORVU2Hr1G120340.28 , HORVU5Hr1G027750.1 , HORVU5Hr1G027750.2 , HORVU1Hr1G008810.5 , HORVU3Hr1G004050.2 , HORVU3Hr1G004050.3 , HORVU3Hr1G004050.1 , HORVU2Hr1G120340.36 , HORVU2Hr1G120340.37 , HORVU2Hr1G120340.34 , HORVU2Hr1G120340.35 , HORVU2Hr1G120340.32 , HORVU2Hr1G120340.33 , HORVU2Hr1G120340.30 , HORVU2Hr1G120340.38 , HORVU2Hr1G120340.39 , HORVU2Hr1G120340.43 , HORVU2Hr1G120340.42 , HORVU2Hr1G120340.41 , HORVU2Hr1G120340.40 , HORVU2Hr1G120340.47 , HORVU2Hr1G120340.46 , HORVU2Hr1G120340.45 , HORVU2Hr1G120340.48 , HORVU3Hr1G100500.2 , HORVU3Hr1G100500.1 , HORVU4Hr1G052490.11 , HORVU5Hr1G063410.3 , HORVU5Hr1G063410.2 , HORVU5Hr1G063410.1 , HORVU4Hr1G052490.6 , HORVU4Hr1G052490.7 , HORVU4Hr1G052490.4 , HORVU4Hr1G052490.5 , HORVU4Hr1G052490.2 , HORVU4Hr1G052490.3 , HORVU4Hr1G052490.1 , HORVU4Hr1G052490.8 , HORVU4Hr1G052490.9 , HORVU1Hr1G008810.3 , HORVU2Hr1G016380.1 , HORVU2Hr1G016380.2 , HORVU2Hr1G016380.3 , HORVU1Hr1G016420.1 , HORVU3Hr1G092820.1 , HORVU3Hr1G092820.2 , HORVU3Hr1G092820.3 , HORVU2Hr1G120340.50 , HORVU2Hr1G120340.51 , HORVU2Hr1G120340.52 , HORVU2Hr1G120340.53 , HORVU2Hr1G120340.18 , HORVU2Hr1G120340.19 , HORVU2Hr1G120340.14 , HORVU2Hr1G120340.15 , HORVU2Hr1G120340.16 , HORVU2Hr1G120340.17 , HORVU2Hr1G120340.11 , HORVU2Hr1G120340.12 , HORVU2Hr1G120340.13 , HORVU2Hr1G120340.6 , HORVU2Hr1G120340.7 , HORVU2Hr1G120340.4 , HORVU2Hr1G120340.5 , HORVU2Hr1G120340.2 , HORVU2Hr1G120340.3 , HORVU2Hr1G120340.1 , HORVU2Hr1G120340.8
Wheat TraesCS3B02G320800 , TraesCS3D02G540600 , TraesCS1D02G043300 , TraesCS1D02G043300 , TraesCS4D02G181100 , TraesCS1A02G406600 , TraesCS1A02G076200 , TraesCS3A02G535100 , TraesCS1B02G094500 , TraesCS1B02G055200 , TraesCS2A02G552400 , TraesCS5D02G225800 , TraesCS2B02G583800 , TraesCS3D02G468400 , TraesCS3B02G515900 , TraesCS5A02G217900 , TraesCS3B02G039100 , TraesCS3D02G286300 , TraesCS5B02G105900 , TraesCS4B02G179500 , TraesCS4A02G124900 , TraesCS3B02G612200 , TraesCS5D02G113300 , TraesCS1A02G042700 , TraesCS4D02G319700 , TraesCS5A02G101000 , TraesCS5B02G216900 , TraesCS3A02G044700 , TraesCS3D02G036200 , TraesCS2D02G324800 , TraesCS5A02G495500 , TraesCS2A02G338200 , TraesCS3B02G126800 , TraesCS4B02G323300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
2 Sobic.003G369100 AP2 domain containing protein, expressed -
3 Sobic.008G136400 expressed protein -
4 Sobic.002G055600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.009G234100 WRKY49, expressed -
6 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
7 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
8 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
10 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
12 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
13 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
14 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
16 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
17 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.004G177700 AIG1, putative, expressed -
19 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G080100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G423300 Sobic002G423300 Sobic003G334600 Sobic003G334600 Sobic002G423300--Sobic003G334600 Sobic003G369100 Sobic003G369100 Sobic002G423300--Sobic003G369100 Sobic008G136400 Sobic008G136400 Sobic002G423300--Sobic008G136400 Sobic002G055600 Sobic002G055600 Sobic002G423300--Sobic002G055600 Sobic009G234100 Sobic009G234100 Sobic002G423300--Sobic009G234100 Sobic002G333400 Sobic002G333400 Sobic002G423300--Sobic002G333400 Sobic004G208700 Sobic004G208700 Sobic002G423300--Sobic004G208700 Sobic004G237800 Sobic004G237800 Sobic002G423300--Sobic004G237800 Sobic003G345100 Sobic003G345100 Sobic002G423300--Sobic003G345100 Sobic003G334600--Sobic003G369100 Sobic001G038900 Sobic001G038900 Sobic003G334600--Sobic001G038900 Sobic003G334600--Sobic008G136400 Sobic002G140400 Sobic002G140400 Sobic003G334600--Sobic002G140400 Sobic008G050600 Sobic008G050600 Sobic003G334600--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G334600--Sobic001G308300 Sobic007G074000 Sobic007G074000 Sobic003G334600--Sobic007G074000 Sobic003G387000 Sobic003G387000 Sobic003G334600--Sobic003G387000 Sobic003G334600--Sobic003G345100 Sobic004G141200 Sobic004G141200 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic001G138600 Sobic001G138600 Sobic003G369100--Sobic001G138600 Sobic001G108200 Sobic001G108200 Sobic003G369100--Sobic001G108200 Sobic001G140900 Sobic001G140900 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G369100--Sobic003G345100 Sobic003G369100--Sobic008G050600 Sobic003G369100--Sobic001G308300 Sobic008G136400--Sobic001G038900 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic006G275200 Sobic006G275200 Sobic008G136400--Sobic006G275200 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic008G136400--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic008G136400--Sobic009G008900 Sobic002G055600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic002G055600--Sobic005G091500 Sobic002G055600--Sobic008G136400 Sobic004G321300 Sobic004G321300 Sobic002G055600--Sobic004G321300 Sobic002G055600--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic002G055600--Sobic002G055700 Sobic002G055600--Sobic003G334600 Sobic002G183200 Sobic002G183200 Sobic002G055600--Sobic002G183200 Sobic004G189500 Sobic004G189500 Sobic002G055600--Sobic004G189500 Sobic009G234100--Sobic004G208700 Sobic005G063100 Sobic005G063100 Sobic009G234100--Sobic005G063100 Sobic009G234100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic009G234100--Sobic003G286600 Sobic001G435000 Sobic001G435000 Sobic009G234100--Sobic001G435000 Sobic009G234100--Sobic008G050600 Sobic005G099000 Sobic005G099000 Sobic009G234100--Sobic005G099000 Sobic007G155000 Sobic007G155000 Sobic009G234100--Sobic007G155000 Sobic010G259600 Sobic010G259600 Sobic009G234100--Sobic010G259600 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic002G333400--Sobic006G158600 Sobic006G056400 Sobic006G056400 Sobic002G333400--Sobic006G056400 Sobic002G333400--Sobic008G136400 Sobic005G186100 Sobic005G186100 Sobic002G333400--Sobic005G186100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic002G333400--Sobic007G074000 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic009G164600 Sobic009G164600 Sobic004G208700--Sobic009G164600 Sobic009G159400 Sobic009G159400 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic004G208700--Sobic007G155000 Sobic004G237800--Sobic007G074000 Sobic004G237800--Sobic004G321300 Sobic002G336600 Sobic002G336600 Sobic004G237800--Sobic002G336600 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic004G237800--Sobic005G091500 Sobic004G237800--Sobic001G112200 Sobic004G237800--Sobic005G063100 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic003G345100--Sobic009G164600 Sobic003G345100--Sobic001G140900 Sobic003G345100--Sobic004G208700 Sobic003G345100--Sobic005G099000 Sobic003G345100--Sobic009G159400 Sobic003G345100--Sobic003G369100 Sobic003G345100--Sobic001G435000
Octagon: transcription factors


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