Gene annotation
Transcriptome id Sobic.003G429300.1
Synonym Sb03g046140, NQR
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
NADPH quinone oxidoreductase, putative, expressed
UniProt C5XIG7
Pfam PF02525
Panther DB PTHR30543 PTHR30543:SF5
NCBI CDD KOG4530; Predicted flavoprotein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27890 : NADPH:quinone oxidoreductase
RAP-DB (Rice) LOC_Os01g72460.1 : NADPH quinone oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a039109
Brachypodium KQK11601 , KQK11600
Barley HORVU6Hr1G005920.6 , HORVU3Hr1G018530.1 , HORVU3Hr1G018530.2 , HORVU3Hr1G018530.3 , HORVU3Hr1G108920.1 , HORVU3Hr1G108920.3 , HORVU3Hr1G108920.2 , HORVU6Hr1G005920.1 , HORVU6Hr1G005920.3 , HORVU6Hr1G005920.4 , HORVU6Hr1G005920.5 , HORVU3Hr1G108750.4 , HORVU6Hr1G005920.7 , HORVU3Hr1G108750.2 , HORVU3Hr1G108750.3 , HORVU6Hr1G005920.2 , HORVU3Hr1G108750.1 , HORVU6Hr1G005920.8
Wheat TraesCS6D02G039300 , TraesCS6D02G039300 , TraesCS3D02G104200 , TraesCS6B02G047400 , TraesCS6A02G033800 , TraesCS3B02G119700 , TraesCS3B02G551900 , TraesCS6B02G047800 , TraesCS3D02G496800 , TraesCS3D02G104400 , TraesCS3D02G496600 , TraesCS3A02G490400 , TraesCS3A02G490700 , TraesCS3A02G490700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
2 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
3 Sobic.008G111100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
4 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
5 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
8 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
10 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
11 Sobic.006G148000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G290400 no apical meristem protein, putative, expressed -
13 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.004G307000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
15 Sobic.003G387200 - -
16 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
17 Sobic.001G474200 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
18 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
20 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -


Gene co-expression network
sample Sobic003G429300 Sobic003G429300 Sobic007G171000 Sobic007G171000 Sobic003G429300--Sobic007G171000 Sobic006G179500 Sobic006G179500 Sobic003G429300--Sobic006G179500 Sobic008G111100 Sobic008G111100 Sobic003G429300--Sobic008G111100 Sobic002G224100 Sobic002G224100 Sobic003G429300--Sobic002G224100 Sobic003G019200 Sobic003G019200 Sobic003G429300--Sobic003G019200 Sobic002G195900 Sobic002G195900 Sobic003G429300--Sobic002G195900 Sobic006G228300 Sobic006G228300 Sobic003G429300--Sobic006G228300 Sobic010G200700 Sobic010G200700 Sobic003G429300--Sobic010G200700 Sobic002G359300 Sobic002G359300 Sobic003G429300--Sobic002G359300 Sobic009G155200 Sobic009G155200 Sobic007G171000--Sobic009G155200 Sobic007G171000--Sobic002G195900 Sobic007G171000--Sobic003G429300 Sobic001G119000 Sobic001G119000 Sobic007G171000--Sobic001G119000 Sobic009G177800 Sobic009G177800 Sobic007G171000--Sobic009G177800 Sobic007G171000--Sobic002G359300 Sobic002G046100 Sobic002G046100 Sobic007G171000--Sobic002G046100 Sobic007G171000--Sobic008G111100 Sobic007G137700 Sobic007G137700 Sobic007G171000--Sobic007G137700 Sobic002G140300 Sobic002G140300 Sobic006G179500--Sobic002G140300 Sobic006G179500--Sobic002G359300 Sobic006G183400 Sobic006G183400 Sobic006G179500--Sobic006G183400 Sobic001G040200 Sobic001G040200 Sobic006G179500--Sobic001G040200 Sobic004G222500 Sobic004G222500 Sobic006G179500--Sobic004G222500 Sobic003G300800 Sobic003G300800 Sobic006G179500--Sobic003G300800 Sobic003G430400 Sobic003G430400 Sobic006G179500--Sobic003G430400 Sobic006G165100 Sobic006G165100 Sobic006G179500--Sobic006G165100 Sobic006G089300 Sobic006G089300 Sobic006G179500--Sobic006G089300 Sobic008G111100--Sobic009G177800 Sobic008G111100--Sobic003G429300 Sobic004G307000 Sobic004G307000 Sobic008G111100--Sobic004G307000 Sobic008G111100--Sobic003G019200 Sobic008G111100--Sobic009G155200 Sobic008G111100--Sobic007G171000 Sobic008G111100--Sobic002G195900 Sobic010G224200 Sobic010G224200 Sobic008G111100--Sobic010G224200 Sobic002G423300 Sobic002G423300 Sobic008G111100--Sobic002G423300 Sobic004G158901 Sobic004G158901 Sobic002G224100--Sobic004G158901 Sobic002G224100--Sobic003G429300 Sobic007G025700 Sobic007G025700 Sobic002G224100--Sobic007G025700 Sobic002G224100--Sobic004G307000 Sobic003G189200 Sobic003G189200 Sobic002G224100--Sobic003G189200 Sobic005G117400 Sobic005G117400 Sobic002G224100--Sobic005G117400 Sobic002G379866 Sobic002G379866 Sobic002G224100--Sobic002G379866 Sobic002G224100--Sobic007G171000 Sobic002G224100--Sobic008G111100 Sobic010G246000 Sobic010G246000 Sobic003G019200--Sobic010G246000 Sobic001G147200 Sobic001G147200 Sobic003G019200--Sobic001G147200 Sobic009G200700 Sobic009G200700 Sobic003G019200--Sobic009G200700 Sobic001G399100 Sobic001G399100 Sobic003G019200--Sobic001G399100 Sobic007G198100 Sobic007G198100 Sobic003G019200--Sobic007G198100 Sobic002G374100 Sobic002G374100 Sobic003G019200--Sobic002G374100 Sobic003G019200--Sobic003G429300 Sobic003G019200--Sobic010G224200 Sobic003G019200--Sobic008G111100 Sobic002G195900--Sobic002G359300 Sobic002G195900--Sobic001G040200 Sobic002G195900--Sobic007G171000 Sobic003G334600 Sobic003G334600 Sobic002G195900--Sobic003G334600 Sobic002G356101 Sobic002G356101 Sobic002G195900--Sobic002G356101 Sobic002G195900--Sobic009G177800 Sobic009G183300 Sobic009G183300 Sobic002G195900--Sobic009G183300 Sobic002G055600 Sobic002G055600 Sobic002G195900--Sobic002G055600 Sobic002G195900--Sobic003G430400 Sobic006G228300--Sobic006G089300 Sobic006G228300--Sobic010G200700 Sobic006G228300--Sobic006G179500 Sobic006G228300--Sobic001G040200 Sobic001G538866 Sobic001G538866 Sobic006G228300--Sobic001G538866 Sobic006G228300--Sobic002G140300 Sobic001G095300 Sobic001G095300 Sobic006G228300--Sobic001G095300 Sobic002G131800 Sobic002G131800 Sobic006G228300--Sobic002G131800 Sobic001G341600 Sobic001G341600 Sobic006G228300--Sobic001G341600 Sobic004G297200 Sobic004G297200 Sobic010G200700--Sobic004G297200 Sobic010G200700--Sobic006G089300 Sobic003G012800 Sobic003G012800 Sobic010G200700--Sobic003G012800 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic009G066800 Sobic009G066800 Sobic010G200700--Sobic009G066800 Sobic002G036100 Sobic002G036100 Sobic010G200700--Sobic002G036100 Sobic010G245800 Sobic010G245800 Sobic010G200700--Sobic010G245800 Sobic010G200700--Sobic002G131800 Sobic002G359300--Sobic001G040200 Sobic002G359300--Sobic006G179500 Sobic002G359300--Sobic002G140300 Sobic002G359300--Sobic006G183400 Sobic002G359300--Sobic002G195900 Sobic002G359300--Sobic003G430400 Sobic003G264500 Sobic003G264500 Sobic002G359300--Sobic003G264500 Sobic002G359300--Sobic006G089300 Sobic002G359300--Sobic009G183300
Octagon: transcription factors


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