Gene annotation
Transcriptome id Sobic.004G307000.1
Synonym Sb04g033970, AR781
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
DUF1645 domain containing protein, putative, expressed
UniProt C5XSS7
Pfam PF07816
Panther DB PTHR33095 PTHR33095:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26530 : Protein of unknown function (DUF1645)
RAP-DB (Rice) LOC_Os02g52380.1 : DUF1645 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033109
Brachypodium KQK01781 , KQK19008
Barley HORVU7Hr1G035850.2 , HORVU7Hr1G035850.3 , HORVU7Hr1G035850.1 , HORVU7Hr1G035850.4 , HORVU6Hr1G077230.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.003G322900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G137700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
4 Sobic.008G111100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
5 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.002G055600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
8 Sobic.002G423300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.002G117100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
10 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
11 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
12 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.004G167800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pectinesterase inhibitor domain containing protein, putative, expressed -
14 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
15 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
16 Sobic.007G025700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
17 Sobic.001G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
19 Sobic.010G069200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
20 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease


Gene co-expression network
sample Sobic004G307000 Sobic004G307000 Sobic009G177800 Sobic009G177800 Sobic004G307000--Sobic009G177800 Sobic003G322900 Sobic003G322900 Sobic004G307000--Sobic003G322900 Sobic007G137700 Sobic007G137700 Sobic004G307000--Sobic007G137700 Sobic008G111100 Sobic008G111100 Sobic004G307000--Sobic008G111100 Sobic002G195900 Sobic002G195900 Sobic004G307000--Sobic002G195900 Sobic002G055600 Sobic002G055600 Sobic004G307000--Sobic002G055600 Sobic004G050000 Sobic004G050000 Sobic004G307000--Sobic004G050000 Sobic002G423300 Sobic002G423300 Sobic004G307000--Sobic002G423300 Sobic002G117100 Sobic002G117100 Sobic004G307000--Sobic002G117100 Sobic002G183200 Sobic002G183200 Sobic009G177800--Sobic002G183200 Sobic009G177800--Sobic004G307000 Sobic009G177800--Sobic008G111100 Sobic001G119100 Sobic001G119100 Sobic009G177800--Sobic001G119100 Sobic009G177800--Sobic002G195900 Sobic001G119000 Sobic001G119000 Sobic009G177800--Sobic001G119000 Sobic006G173900 Sobic006G173900 Sobic009G177800--Sobic006G173900 Sobic004G167800 Sobic004G167800 Sobic009G177800--Sobic004G167800 Sobic007G171000 Sobic007G171000 Sobic009G177800--Sobic007G171000 Sobic002G263400 Sobic002G263400 Sobic003G322900--Sobic002G263400 Sobic004G189400 Sobic004G189400 Sobic003G322900--Sobic004G189400 Sobic003G322900--Sobic002G183200 Sobic004G148000 Sobic004G148000 Sobic003G322900--Sobic004G148000 Sobic003G382600 Sobic003G382600 Sobic003G322900--Sobic003G382600 Sobic005G091500 Sobic005G091500 Sobic003G322900--Sobic005G091500 Sobic002G140400 Sobic002G140400 Sobic003G322900--Sobic002G140400 Sobic007G155100 Sobic007G155100 Sobic003G322900--Sobic007G155100 Sobic003G307801 Sobic003G307801 Sobic003G322900--Sobic003G307801 Sobic007G137700--Sobic004G307000 Sobic007G137700--Sobic007G171000 Sobic007G137700--Sobic002G055600 Sobic007G137700--Sobic002G195900 Sobic002G356101 Sobic002G356101 Sobic007G137700--Sobic002G356101 Sobic007G137700--Sobic002G423300 Sobic003G019200 Sobic003G019200 Sobic007G137700--Sobic003G019200 Sobic007G137700--Sobic004G050000 Sobic001G399100 Sobic001G399100 Sobic007G137700--Sobic001G399100 Sobic008G111100--Sobic009G177800 Sobic003G429300 Sobic003G429300 Sobic008G111100--Sobic003G429300 Sobic008G111100--Sobic004G307000 Sobic008G111100--Sobic003G019200 Sobic009G155200 Sobic009G155200 Sobic008G111100--Sobic009G155200 Sobic008G111100--Sobic007G171000 Sobic008G111100--Sobic002G195900 Sobic010G224200 Sobic010G224200 Sobic008G111100--Sobic010G224200 Sobic008G111100--Sobic002G423300 Sobic002G359300 Sobic002G359300 Sobic002G195900--Sobic002G359300 Sobic001G040200 Sobic001G040200 Sobic002G195900--Sobic001G040200 Sobic002G195900--Sobic007G171000 Sobic003G334600 Sobic003G334600 Sobic002G195900--Sobic003G334600 Sobic002G195900--Sobic002G356101 Sobic002G195900--Sobic009G177800 Sobic009G183300 Sobic009G183300 Sobic002G195900--Sobic009G183300 Sobic002G195900--Sobic002G055600 Sobic003G430400 Sobic003G430400 Sobic002G195900--Sobic003G430400 Sobic004G237800 Sobic004G237800 Sobic002G055600--Sobic004G237800 Sobic002G055600--Sobic005G091500 Sobic008G136400 Sobic008G136400 Sobic002G055600--Sobic008G136400 Sobic004G321300 Sobic004G321300 Sobic002G055600--Sobic004G321300 Sobic002G055600--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic002G055600--Sobic002G055700 Sobic002G055600--Sobic003G334600 Sobic002G055600--Sobic002G183200 Sobic004G189500 Sobic004G189500 Sobic002G055600--Sobic004G189500 Sobic009G043600 Sobic009G043600 Sobic004G050000--Sobic009G043600 Sobic001G066000 Sobic001G066000 Sobic004G050000--Sobic001G066000 Sobic004G049900 Sobic004G049900 Sobic004G050000--Sobic004G049900 Sobic004G277000 Sobic004G277000 Sobic004G050000--Sobic004G277000 Sobic002G267500 Sobic002G267500 Sobic004G050000--Sobic002G267500 Sobic006G121500 Sobic006G121500 Sobic004G050000--Sobic006G121500 Sobic002G090200 Sobic002G090200 Sobic004G050000--Sobic002G090200 Sobic004G050000--Sobic009G177800 Sobic006G108400 Sobic006G108400 Sobic004G050000--Sobic006G108400 Sobic002G423300--Sobic003G334600 Sobic003G369100 Sobic003G369100 Sobic002G423300--Sobic003G369100 Sobic002G423300--Sobic008G136400 Sobic002G423300--Sobic002G055600 Sobic009G234100 Sobic009G234100 Sobic002G423300--Sobic009G234100 Sobic002G333400 Sobic002G333400 Sobic002G423300--Sobic002G333400 Sobic004G208700 Sobic004G208700 Sobic002G423300--Sobic004G208700 Sobic002G423300--Sobic004G237800 Sobic003G345100 Sobic003G345100 Sobic002G423300--Sobic003G345100 Sobic007G061300 Sobic007G061300 Sobic002G117100--Sobic007G061300 Sobic002G117100--Sobic003G322900 Sobic002G117100--Sobic002G263400 Sobic002G104900 Sobic002G104900 Sobic002G117100--Sobic002G104900 Sobic002G117100--Sobic001G119100 Sobic002G117100--Sobic003G430400 Sobic004G088551 Sobic004G088551 Sobic002G117100--Sobic004G088551 Sobic001G317000 Sobic001G317000 Sobic002G117100--Sobic001G317000 Sobic002G195400 Sobic002G195400 Sobic002G117100--Sobic002G195400
Octagon: transcription factors


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