Gene annotation
Transcriptome id Sobic.006G131400.2,Sobic.006G131400.1
Synonym Sb06g021130
Functional annotation expressed protein
UniProt C5YBE0
Pfam PF13489
Panther DB PTHR14614 PTHR14614:SF43
NCBI CDD KOG2920; Predicted methyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G43320 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os04g41500.2 : expressed protein
MaizeGDB (Corn) Zm00025a010880 , Zm00025a056369
Brachypodium KQJ83326 , KQJ83327
Barley HORVU0Hr1G038350.1 , HORVU0Hr1G038350.3 , HORVU0Hr1G038350.2 , HORVU0Hr1G038350.5 , HORVU0Hr1G038350.4
Wheat TraesCS2D02G347700 , TraesCS2A02G349300 , TraesCS2B02G367700
Populus -


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cDNA sequences
Sobic.006G131400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
2 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
3 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
5 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
6 Sobic.004G318100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
7 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
8 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
10 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
11 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
12 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
14 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
15 Sobic.006G182100 ORM1, putative, expressed -
16 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
17 Sobic.001G206400 fiber protein Fb34, putative, expressed -
18 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
19 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
20 Sobic.003G037800 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G131400 Sobic006G131400 Sobic001G516600 Sobic001G516600 Sobic006G131400--Sobic001G516600 Sobic003G094200 Sobic003G094200 Sobic006G131400--Sobic003G094200 Sobic002G343500 Sobic002G343500 Sobic006G131400--Sobic002G343500 Sobic003G285800 Sobic003G285800 Sobic006G131400--Sobic003G285800 Sobic009G033700 Sobic009G033700 Sobic006G131400--Sobic009G033700 Sobic004G318100 Sobic004G318100 Sobic006G131400--Sobic004G318100 Sobic009G129000 Sobic009G129000 Sobic006G131400--Sobic009G129000 Sobic001G107400 Sobic001G107400 Sobic006G131400--Sobic001G107400 Sobic004G036600 Sobic004G036600 Sobic006G131400--Sobic004G036600 Sobic001G173300 Sobic001G173300 Sobic001G516600--Sobic001G173300 Sobic007G151100 Sobic007G151100 Sobic001G516600--Sobic007G151100 Sobic003G037800 Sobic003G037800 Sobic001G516600--Sobic003G037800 Sobic003G296700 Sobic003G296700 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G532200 Sobic001G532200 Sobic001G516600--Sobic001G532200 Sobic001G516600--Sobic006G131400 Sobic008G177800 Sobic008G177800 Sobic001G516600--Sobic008G177800 Sobic002G245100 Sobic002G245100 Sobic001G516600--Sobic002G245100 Sobic001G424200 Sobic001G424200 Sobic003G094200--Sobic001G424200 Sobic010G178500 Sobic010G178500 Sobic003G094200--Sobic010G178500 Sobic002G104900 Sobic002G104900 Sobic003G094200--Sobic002G104900 Sobic009G141800 Sobic009G141800 Sobic003G094200--Sobic009G141800 Sobic001G124600 Sobic001G124600 Sobic003G094200--Sobic001G124600 Sobic001G015100 Sobic001G015100 Sobic003G094200--Sobic001G015100 Sobic003G094200--Sobic006G131400 Sobic009G217000 Sobic009G217000 Sobic003G094200--Sobic009G217000 Sobic003G094200--Sobic004G036600 Sobic002G343500--Sobic001G516600 Sobic002G343500--Sobic006G131400 Sobic002G353400 Sobic002G353400 Sobic002G343500--Sobic002G353400 Sobic002G374100 Sobic002G374100 Sobic002G343500--Sobic002G374100 Sobic006G182100 Sobic006G182100 Sobic002G343500--Sobic006G182100 Sobic002G343500--Sobic001G173300 Sobic010G228000 Sobic010G228000 Sobic002G343500--Sobic010G228000 Sobic002G343500--Sobic003G296700 Sobic002G294700 Sobic002G294700 Sobic002G343500--Sobic002G294700 Sobic002G046100 Sobic002G046100 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic010G178200 Sobic010G178200 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic002G345300 Sobic002G345300 Sobic003G285800--Sobic002G345300 Sobic001G477300 Sobic001G477300 Sobic003G285800--Sobic001G477300 Sobic001G281400 Sobic001G281400 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic003G285800--Sobic009G129000 Sobic009G033700--Sobic010G086200 Sobic009G033700--Sobic003G037800 Sobic009G033700--Sobic001G281400 Sobic003G249800 Sobic003G249800 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G033700--Sobic009G129000 Sobic009G033700--Sobic002G245100 Sobic009G143400 Sobic009G143400 Sobic009G033700--Sobic009G143400 Sobic004G065500 Sobic004G065500 Sobic009G033700--Sobic004G065500 Sobic004G318100--Sobic006G131400 Sobic010G065900 Sobic010G065900 Sobic004G318100--Sobic010G065900 Sobic004G318100--Sobic001G173300 Sobic004G318100--Sobic001G516600 Sobic003G357100 Sobic003G357100 Sobic004G318100--Sobic003G357100 Sobic004G318100--Sobic009G141800 Sobic003G209000 Sobic003G209000 Sobic004G318100--Sobic003G209000 Sobic004G318100--Sobic009G217000 Sobic001G351000 Sobic001G351000 Sobic004G318100--Sobic001G351000 Sobic009G129000--Sobic010G086200 Sobic005G028700 Sobic005G028700 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic009G129000--Sobic004G065500 Sobic010G217800 Sobic010G217800 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic010G204600 Sobic010G204600 Sobic009G129000--Sobic010G204600 Sobic001G107400--Sobic002G245100 Sobic004G187900 Sobic004G187900 Sobic001G107400--Sobic004G187900 Sobic001G107400--Sobic003G037800 Sobic001G107400--Sobic009G141800 Sobic003G429000 Sobic003G429000 Sobic001G107400--Sobic003G429000 Sobic005G018700 Sobic005G018700 Sobic001G107400--Sobic005G018700 Sobic001G107400--Sobic001G281400 Sobic004G321300 Sobic004G321300 Sobic001G107400--Sobic004G321300 Sobic009G159400 Sobic009G159400 Sobic001G107400--Sobic009G159400 Sobic004G036600--Sobic002G294700 Sobic004G036600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G036600--Sobic006G231100 Sobic004G036600--Sobic001G173300 Sobic010G234600 Sobic010G234600 Sobic004G036600--Sobic010G234600 Sobic004G036600--Sobic001G516600 Sobic004G036600--Sobic002G374100 Sobic004G036600--Sobic009G141800 Sobic004G036600--Sobic009G217000
Octagon: transcription factors


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