Gene annotation
Transcriptome id Sobic.006G062800.1
Synonym Sb06g015050
Functional annotation OTU-like cysteine protease family protein, putative, expressed
UniProt A0A1Z5RCK6
Pfam PF02338
Panther DB PTHR12419 PTHR12419:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02070 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os04g32970.1 : OTU-like cysteine protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055971 , Zm00025a011611
Brachypodium KQJ82359 , PNT60957 , PNT60958 , KQK23348
Barley HORVU2Hr1G071830.1 , HORVU2Hr1G071830.2 , HORVU2Hr1G071830.6 , HORVU2Hr1G071830.20 , HORVU2Hr1G071830.21 , HORVU2Hr1G071830.5 , HORVU2Hr1G071830.7 , HORVU2Hr1G071830.9 , HORVU2Hr1G071830.8 , HORVU2Hr1G071830.15 , HORVU2Hr1G071830.14 , HORVU2Hr1G071830.16 , HORVU2Hr1G071830.11 , HORVU2Hr1G071830.10 , HORVU2Hr1G071830.13 , HORVU2Hr1G071830.12 , HORVU2Hr1G071830.19 , HORVU2Hr1G071830.18
Wheat TraesCS2A02G290200 , TraesCS2A02G290200 , TraesCS2D02G288100 , TraesCS2B02G306700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
2 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
3 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
4 Sobic.007G059900 DUF292 domain containing protein, expressed -
5 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
6 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
7 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
8 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
9 Sobic.002G261900 arabinogalactan protein, putative, expressed -
10 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
11 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
12 Sobic.006G131400 expressed protein -
13 Sobic.003G368500 Yip1 domain containing protein, expressed -
14 Sobic.008G161000 protein kinase domain containing protein, expressed -
15 Sobic.010G204300 expressed protein -
16 Sobic.002G083266 - K00326: cytochrome-b5 reductase
17 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
18 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
19 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
20 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2


Gene co-expression network
sample Sobic006G062800 Sobic006G062800 Sobic010G213400 Sobic010G213400 Sobic006G062800--Sobic010G213400 Sobic003G249800 Sobic003G249800 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic009G129000 Sobic009G129000 Sobic006G062800--Sobic009G129000 Sobic002G218000 Sobic002G218000 Sobic006G062800--Sobic002G218000 Sobic002G202300 Sobic002G202300 Sobic006G062800--Sobic002G202300 Sobic009G033700 Sobic009G033700 Sobic006G062800--Sobic009G033700 Sobic002G261900 Sobic002G261900 Sobic006G062800--Sobic002G261900 Sobic003G368500 Sobic003G368500 Sobic010G213400--Sobic003G368500 Sobic010G213400--Sobic003G249800 Sobic010G213400--Sobic009G033700 Sobic004G284500 Sobic004G284500 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic001G224400 Sobic001G224400 Sobic010G213400--Sobic001G224400 Sobic010G213400--Sobic006G062800 Sobic001G445800 Sobic001G445800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100 Sobic008G161000 Sobic008G161000 Sobic003G249800--Sobic008G161000 Sobic001G037000 Sobic001G037000 Sobic003G249800--Sobic001G037000 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic010G178200 Sobic010G178200 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic002G345300 Sobic002G345300 Sobic003G285800--Sobic002G345300 Sobic001G477300 Sobic001G477300 Sobic003G285800--Sobic001G477300 Sobic001G281400 Sobic001G281400 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic003G285800--Sobic009G129000 Sobic003G220600 Sobic003G220600 Sobic007G059900--Sobic003G220600 Sobic007G059900--Sobic006G062800 Sobic010G204300 Sobic010G204300 Sobic007G059900--Sobic010G204300 Sobic007G186300 Sobic007G186300 Sobic007G059900--Sobic007G186300 Sobic007G059900--Sobic002G261900 Sobic007G059900--Sobic008G161000 Sobic004G293700 Sobic004G293700 Sobic007G059900--Sobic004G293700 Sobic002G296300 Sobic002G296300 Sobic007G059900--Sobic002G296300 Sobic009G152200 Sobic009G152200 Sobic007G059900--Sobic009G152200 Sobic009G129000--Sobic010G086200 Sobic005G028700 Sobic005G028700 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic004G065500 Sobic004G065500 Sobic009G129000--Sobic004G065500 Sobic010G217800 Sobic010G217800 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic010G204600 Sobic010G204600 Sobic009G129000--Sobic010G204600 Sobic009G180000 Sobic009G180000 Sobic002G218000--Sobic009G180000 Sobic006G141500 Sobic006G141500 Sobic002G218000--Sobic006G141500 Sobic002G218000--Sobic003G249800 Sobic010G204500 Sobic010G204500 Sobic002G218000--Sobic010G204500 Sobic005G111100 Sobic005G111100 Sobic002G218000--Sobic005G111100 Sobic001G066700 Sobic001G066700 Sobic002G218000--Sobic001G066700 Sobic010G106200 Sobic010G106200 Sobic002G218000--Sobic010G106200 Sobic010G243200 Sobic010G243200 Sobic002G218000--Sobic010G243200 Sobic002G218000--Sobic002G330000 Sobic003G253000 Sobic003G253000 Sobic002G202300--Sobic003G253000 Sobic002G202300--Sobic003G220600 Sobic002G202300--Sobic006G141500 Sobic006G264300 Sobic006G264300 Sobic002G202300--Sobic006G264300 Sobic002G202300--Sobic002G046100 Sobic003G115800 Sobic003G115800 Sobic002G202300--Sobic003G115800 Sobic002G202300--Sobic010G204300 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100 Sobic009G033700--Sobic010G086200 Sobic003G037800 Sobic003G037800 Sobic009G033700--Sobic003G037800 Sobic009G033700--Sobic001G281400 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G033700--Sobic009G129000 Sobic002G245100 Sobic002G245100 Sobic009G033700--Sobic002G245100 Sobic009G033700--Sobic009G143400 Sobic009G033700--Sobic004G065500 Sobic002G261900--Sobic006G062800 Sobic002G261900--Sobic007G059900 Sobic002G083266 Sobic002G083266 Sobic002G261900--Sobic002G083266 Sobic001G311100 Sobic001G311100 Sobic002G261900--Sobic001G311100 Sobic002G261900--Sobic001G066700 Sobic003G043400 Sobic003G043400 Sobic002G261900--Sobic003G043400 Sobic002G261900--Sobic010G204300 Sobic009G070200 Sobic009G070200 Sobic002G261900--Sobic009G070200 Sobic004G026200 Sobic004G026200 Sobic002G261900--Sobic004G026200
Octagon: transcription factors


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