Gene annotation
Transcriptome id Sobic.002G083266.1,Sobic.002G083266.3,Sobic.002G083266.4,Sobic.002G083266.2
Synonym -
Functional annotation -
UniProt A0A1W0W315 , A0A1W0W311 , A0A1W0W2Z9
Pfam PF00173
Panther DB PTHR19370 PTHR19370 PTHR19370:SF68
NCBI CDD KOG0536; Flavohemoprotein b5+b5R
KEGG Orthology K00326; cytochrome-b5 reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09680 : reduced lateral root formation
RAP-DB (Rice) LOC_Os07g12830.3,LOC_Os07g12830.2 : cytochrome b5-like Heme/Steroid binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013369
Brachypodium KQJ83301
Barley HORVU6Hr1G086690.4 , HORVU6Hr1G086690.3 , HORVU6Hr1G086690.1 , HORVU6Hr1G086690.2
Wheat TraesCS6A02G365100 , TraesCS6D02G348500 , TraesCS6B02G399500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
2 Sobic.006G264300 GA18008-PA, putative, expressed -
3 Sobic.001G415000 expressed protein -
4 Sobic.009G111600 expressed protein -
5 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
6 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
7 Sobic.002G261900 arabinogalactan protein, putative, expressed -
8 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
9 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
10 Sobic.004G284500 ORM1, putative, expressed -
11 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
13 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
14 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
15 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
16 Sobic.003G368500 Yip1 domain containing protein, expressed -
17 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
18 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
19 Sobic.003G023000 CID11, putative, expressed -
20 Sobic.004G301400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K08331: autophagy-related protein 13


Gene co-expression network
sample Sobic002G083266 Sobic002G083266 Sobic003G367451 Sobic003G367451 Sobic002G083266--Sobic003G367451 Sobic006G264300 Sobic006G264300 Sobic002G083266--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic002G083266--Sobic001G415000 Sobic009G111600 Sobic009G111600 Sobic002G083266--Sobic009G111600 Sobic001G224400 Sobic001G224400 Sobic002G083266--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic002G083266--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic002G083266--Sobic002G261900 Sobic010G213400 Sobic010G213400 Sobic002G083266--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic002G083266--Sobic004G272800 Sobic004G327300 Sobic004G327300 Sobic003G367451--Sobic004G327300 Sobic001G236300 Sobic001G236300 Sobic003G367451--Sobic001G236300 Sobic007G114200 Sobic007G114200 Sobic003G367451--Sobic007G114200 Sobic001G433400 Sobic001G433400 Sobic003G367451--Sobic001G433400 Sobic003G367451--Sobic004G272800 Sobic003G367451--Sobic002G083266 Sobic004G130900 Sobic004G130900 Sobic003G367451--Sobic004G130900 Sobic003G253000 Sobic003G253000 Sobic003G367451--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic003G367451--Sobic003G220600 Sobic002G264400 Sobic002G264400 Sobic006G264300--Sobic002G264400 Sobic006G264300--Sobic002G083266 Sobic002G202300 Sobic002G202300 Sobic006G264300--Sobic002G202300 Sobic002G180600 Sobic002G180600 Sobic006G264300--Sobic002G180600 Sobic002G267500 Sobic002G267500 Sobic006G264300--Sobic002G267500 Sobic001G329100 Sobic001G329100 Sobic006G264300--Sobic001G329100 Sobic009G149400 Sobic009G149400 Sobic006G264300--Sobic009G149400 Sobic005G034400 Sobic005G034400 Sobic006G264300--Sobic005G034400 Sobic006G264300--Sobic003G253000 Sobic001G415000--Sobic002G083266 Sobic001G440700 Sobic001G440700 Sobic001G415000--Sobic001G440700 Sobic001G415000--Sobic006G264300 Sobic004G020000 Sobic004G020000 Sobic001G415000--Sobic004G020000 Sobic010G026700 Sobic010G026700 Sobic001G415000--Sobic010G026700 Sobic001G415000--Sobic002G202300 Sobic002G385900 Sobic002G385900 Sobic001G415000--Sobic002G385900 Sobic001G040800 Sobic001G040800 Sobic001G415000--Sobic001G040800 Sobic001G415000--Sobic001G224400 Sobic004G284500 Sobic004G284500 Sobic009G111600--Sobic004G284500 Sobic001G403700 Sobic001G403700 Sobic009G111600--Sobic001G403700 Sobic004G276100 Sobic004G276100 Sobic009G111600--Sobic004G276100 Sobic008G179500 Sobic008G179500 Sobic009G111600--Sobic008G179500 Sobic009G111600--Sobic002G083266 Sobic009G111600--Sobic003G367451 Sobic009G111600--Sobic010G213400 Sobic009G111600--Sobic004G272800 Sobic001G399100 Sobic001G399100 Sobic009G111600--Sobic001G399100 Sobic003G368500 Sobic003G368500 Sobic001G224400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic001G224400--Sobic003G155400 Sobic002G153500 Sobic002G153500 Sobic001G224400--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic001G224400--Sobic010G154700 Sobic001G224400--Sobic010G213400 Sobic008G189300 Sobic008G189300 Sobic001G224400--Sobic008G189300 Sobic010G153100 Sobic010G153100 Sobic001G224400--Sobic010G153100 Sobic001G132100 Sobic001G132100 Sobic001G224400--Sobic001G132100 Sobic002G222900 Sobic002G222900 Sobic001G224400--Sobic002G222900 Sobic006G062800--Sobic010G213400 Sobic003G249800 Sobic003G249800 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic009G129000 Sobic009G129000 Sobic006G062800--Sobic009G129000 Sobic002G218000 Sobic002G218000 Sobic006G062800--Sobic002G218000 Sobic006G062800--Sobic002G202300 Sobic009G033700 Sobic009G033700 Sobic006G062800--Sobic009G033700 Sobic006G062800--Sobic002G261900 Sobic002G261900--Sobic006G062800 Sobic002G261900--Sobic007G059900 Sobic002G261900--Sobic002G083266 Sobic001G311100 Sobic001G311100 Sobic002G261900--Sobic001G311100 Sobic001G066700 Sobic001G066700 Sobic002G261900--Sobic001G066700 Sobic003G043400 Sobic003G043400 Sobic002G261900--Sobic003G043400 Sobic010G204300 Sobic010G204300 Sobic002G261900--Sobic010G204300 Sobic009G070200 Sobic009G070200 Sobic002G261900--Sobic009G070200 Sobic004G026200 Sobic004G026200 Sobic002G261900--Sobic004G026200 Sobic010G213400--Sobic003G368500 Sobic010G213400--Sobic003G249800 Sobic010G213400--Sobic009G033700 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic010G213400--Sobic001G224400 Sobic010G213400--Sobic006G062800 Sobic001G445800 Sobic001G445800 Sobic010G213400--Sobic001G445800 Sobic010G213400--Sobic010G153100 Sobic004G272800--Sobic002G267500 Sobic001G281400 Sobic001G281400 Sobic004G272800--Sobic001G281400 Sobic004G272800--Sobic003G253000 Sobic001G048832 Sobic001G048832 Sobic004G272800--Sobic001G048832 Sobic002G190900 Sobic002G190900 Sobic004G272800--Sobic002G190900 Sobic002G345300 Sobic002G345300 Sobic004G272800--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic005G188100 Sobic005G188100 Sobic004G272800--Sobic005G188100
Octagon: transcription factors


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