Gene annotation
Transcriptome id Sobic.002G046100.1
Synonym Sb02g003915
Functional annotation zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed
UniProt A0A1B6Q977
Pfam PF01428 PF01754
Panther DB PTHR10634 PTHR10634:SF39
NCBI CDD KOG3173; Predicted Zn-finger protein
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G36320 : A20/AN1-like zinc finger family protein
RAP-DB (Rice) LOC_Os07g07350.3 : zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK20714
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G046100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
2 Sobic.001G281400 expressed protein -
3 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
4 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
5 Sobic.010G086200 GRAM domain containing protein, expressed -
6 Sobic.004G061200 expressed protein -
7 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
8 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.002G190900 expressed protein -
10 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
11 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
12 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
13 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
14 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
15 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
16 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
17 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
18 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
19 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
20 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II


Gene co-expression network
sample Sobic002G046100 Sobic002G046100 Sobic003G285800 Sobic003G285800 Sobic002G046100--Sobic003G285800 Sobic001G281400 Sobic001G281400 Sobic002G046100--Sobic001G281400 Sobic002G345300 Sobic002G345300 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic010G086200 Sobic010G086200 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic001G477300 Sobic001G477300 Sobic002G046100--Sobic001G477300 Sobic002G267500 Sobic002G267500 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic003G285800--Sobic002G046100 Sobic003G285800--Sobic002G187500 Sobic010G178200 Sobic010G178200 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic003G285800--Sobic002G345300 Sobic003G285800--Sobic001G477300 Sobic003G285800--Sobic001G281400 Sobic003G285800--Sobic010G086200 Sobic009G129000 Sobic009G129000 Sobic003G285800--Sobic009G129000 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic001G281400--Sobic002G046100 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic002G345300--Sobic002G046100 Sobic002G345300--Sobic003G350300 Sobic002G345300--Sobic001G281400 Sobic002G345300--Sobic010G178200 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic002G345300--Sobic010G149300 Sobic010G009300 Sobic010G009300 Sobic002G187500--Sobic010G009300 Sobic002G187500--Sobic003G285800 Sobic002G187500--Sobic002G190900 Sobic002G187500--Sobic002G046100 Sobic003G072300 Sobic003G072300 Sobic002G187500--Sobic003G072300 Sobic001G177800 Sobic001G177800 Sobic002G187500--Sobic001G177800 Sobic002G081600 Sobic002G081600 Sobic002G187500--Sobic002G081600 Sobic002G187500--Sobic001G281400 Sobic003G393700 Sobic003G393700 Sobic002G187500--Sobic003G393700 Sobic006G267200 Sobic006G267200 Sobic010G086200--Sobic006G267200 Sobic004G065500 Sobic004G065500 Sobic010G086200--Sobic004G065500 Sobic004G321300 Sobic004G321300 Sobic010G086200--Sobic004G321300 Sobic010G086200--Sobic009G141800 Sobic010G086200--Sobic009G129000 Sobic009G143400 Sobic009G143400 Sobic010G086200--Sobic009G143400 Sobic001G459800 Sobic001G459800 Sobic010G086200--Sobic001G459800 Sobic009G033700 Sobic009G033700 Sobic010G086200--Sobic009G033700 Sobic003G393900 Sobic003G393900 Sobic010G086200--Sobic003G393900 Sobic004G061200--Sobic004G321300 Sobic002G393000 Sobic002G393000 Sobic004G061200--Sobic002G393000 Sobic001G038900 Sobic001G038900 Sobic004G061200--Sobic001G038900 Sobic004G061200--Sobic003G393700 Sobic009G159400 Sobic009G159400 Sobic004G061200--Sobic009G159400 Sobic004G061200--Sobic010G086200 Sobic008G136400 Sobic008G136400 Sobic004G061200--Sobic008G136400 Sobic004G061200--Sobic009G143400 Sobic004G061200--Sobic002G046100 Sobic001G124600 Sobic001G124600 Sobic001G477300--Sobic001G124600 Sobic001G477300--Sobic004G187900 Sobic001G477300--Sobic002G046100 Sobic001G308300 Sobic001G308300 Sobic001G477300--Sobic001G308300 Sobic001G477300--Sobic010G086200 Sobic001G477300--Sobic006G267200 Sobic001G477300--Sobic009G129000 Sobic001G477300--Sobic009G159400 Sobic001G477300--Sobic004G065500 Sobic002G267500--Sobic001G281400 Sobic002G267500--Sobic004G272800 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic002G267500--Sobic010G149300 Sobic002G267500--Sobic002G345300 Sobic001G459200 Sobic001G459200 Sobic002G267500--Sobic001G459200 Sobic002G267500--Sobic009G143400 Sobic006G173900 Sobic006G173900 Sobic002G267500--Sobic006G173900 Sobic002G398901 Sobic002G398901 Sobic002G190900--Sobic002G398901 Sobic010G012500 Sobic010G012500 Sobic002G190900--Sobic010G012500 Sobic007G051000 Sobic007G051000 Sobic002G190900--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic002G190900--Sobic009G176000 Sobic002G190900--Sobic002G081600 Sobic005G188100 Sobic005G188100 Sobic002G190900--Sobic005G188100 Sobic002G190900--Sobic001G281400 Sobic004G211833 Sobic004G211833 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700
Octagon: transcription factors


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