Gene annotation
Transcriptome id Sobic.009G152200.1
Synonym Sb09g021590, TLP10, AtTLP10
Functional annotation OsFBT7 - F-box and tubby domain containing protein, expressed
UniProt C5YYQ1
Pfam PF00646 PF01167
Panther DB PTHR16517 PTHR16517:SF31
NCBI CDD KOG2502; Tub family proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G25280 : tubby like protein 10
RAP-DB (Rice) LOC_Os05g36190.1 : OsFBT7 - F-box and tubby domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053998 , Zm00025a021720 , Zm00025a043841 , Zm00025a010516
Brachypodium KQK10767 , KQK10769 , KQK10768 , PNT64127 , KQK00939 , KQJ85450 , KQJ89302 , KQJ89301
Barley HORVU1Hr1G074940.11 , HORVU1Hr1G074940.10 , HORVU6Hr1G068970.6 , HORVU6Hr1G068970.5 , HORVU6Hr1G068970.2 , HORVU6Hr1G068970.3 , HORVU6Hr1G068970.1 , HORVU6Hr1G068970.7 , HORVU6Hr1G068970.4 , HORVU1Hr1G074940.1 , HORVU1Hr1G074940.3 , HORVU1Hr1G074940.2 , HORVU1Hr1G074940.5 , HORVU1Hr1G074940.4 , HORVU1Hr1G074940.7 , HORVU1Hr1G074940.6 , HORVU1Hr1G074940.8 , HORVU3Hr1G083290.5 , HORVU3Hr1G083290.4 , HORVU3Hr1G083290.7 , HORVU3Hr1G083290.6 , HORVU3Hr1G083290.1 , HORVU3Hr1G083290.3 , HORVU3Hr1G083290.2 , HORVU4Hr1G020110.4 , HORVU4Hr1G020110.2 , HORVU4Hr1G020110.3 , HORVU4Hr1G020110.1 , HORVU2Hr1G124880.1 , HORVU2Hr1G124880.3 , HORVU2Hr1G124880.2 , HORVU2Hr1G124880.5 , HORVU2Hr1G124880.4 , HORVU2Hr1G124880.7 , HORVU2Hr1G124880.6 , HORVU2Hr1G124880.9 , HORVU2Hr1G124880.8 , HORVU1Hr1G074940.9 , HORVU2Hr1G124880.11 , HORVU2Hr1G124880.10 , HORVU2Hr1G124880.13 , HORVU2Hr1G124880.12
Wheat TraesCS7B02G227000 , TraesCS2D02G584900 , TraesCS2B02G613800 , TraesCS4B02G112600 , TraesCS1A02G273100 , TraesCS2A02G574000 , TraesCS1B02G282900 , TraesCS6D02G252800 , TraesCS6D02G252800 , TraesCS3D02G371600 , TraesCS6B02G300200 , TraesCS6A02G272800 , TraesCS6A02G272800 , TraesCS7D02G323100 , TraesCS3B02G411000 , TraesCS4D02G110100 , TraesCS1D02G273200 , TraesCS3A02G378300 , TraesCS7A02G326400 , TraesCS4A02G209000
Populus -


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cDNA sequences
Sobic.009G152200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G161000 protein kinase domain containing protein, expressed -
2 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
3 Sobic.007G059900 DUF292 domain containing protein, expressed -
4 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
5 Sobic.001G330700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
6 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
7 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
8 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
9 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
10 Sobic.003G107600 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
11 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
12 Sobic.002G296300 expressed protein -
13 Sobic.001G078500 expressed protein -
14 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
15 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
16 Sobic.004G334800 vacuolar protein sorting 55 family protein, putative, expressed -
17 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
18 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
19 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
20 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic009G152200 Sobic009G152200 Sobic008G161000 Sobic008G161000 Sobic009G152200--Sobic008G161000 Sobic007G186300 Sobic007G186300 Sobic009G152200--Sobic007G186300 Sobic007G059900 Sobic007G059900 Sobic009G152200--Sobic007G059900 Sobic001G403700 Sobic001G403700 Sobic009G152200--Sobic001G403700 Sobic001G330700 Sobic001G330700 Sobic009G152200--Sobic001G330700 Sobic009G016201 Sobic009G016201 Sobic009G152200--Sobic009G016201 Sobic003G115800 Sobic003G115800 Sobic009G152200--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic009G152200--Sobic003G248600 Sobic003G249800 Sobic003G249800 Sobic009G152200--Sobic003G249800 Sobic008G161000--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic008G161000--Sobic009G033700 Sobic008G161000--Sobic009G152200 Sobic001G037000 Sobic001G037000 Sobic008G161000--Sobic001G037000 Sobic009G129000 Sobic009G129000 Sobic008G161000--Sobic009G129000 Sobic008G161000--Sobic009G016201 Sobic010G204300 Sobic010G204300 Sobic008G161000--Sobic010G204300 Sobic010G204600 Sobic010G204600 Sobic008G161000--Sobic010G204600 Sobic010G213400 Sobic010G213400 Sobic008G161000--Sobic010G213400 Sobic003G007500 Sobic003G007500 Sobic007G186300--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic007G186300--Sobic001G054200 Sobic007G186300--Sobic003G115800 Sobic007G186300--Sobic003G248600 Sobic001G007200 Sobic001G007200 Sobic007G186300--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic007G186300--Sobic009G246950 Sobic010G083700 Sobic010G083700 Sobic007G186300--Sobic010G083700 Sobic009G146100 Sobic009G146100 Sobic007G186300--Sobic009G146100 Sobic007G186300--Sobic009G152200 Sobic003G220600 Sobic003G220600 Sobic007G059900--Sobic003G220600 Sobic006G062800 Sobic006G062800 Sobic007G059900--Sobic006G062800 Sobic007G059900--Sobic010G204300 Sobic007G059900--Sobic007G186300 Sobic002G261900 Sobic002G261900 Sobic007G059900--Sobic002G261900 Sobic007G059900--Sobic008G161000 Sobic004G293700 Sobic004G293700 Sobic007G059900--Sobic004G293700 Sobic002G296300 Sobic002G296300 Sobic007G059900--Sobic002G296300 Sobic007G059900--Sobic009G152200 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic002G078400 Sobic002G078400 Sobic001G403700--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic001G403700--Sobic006G182100 Sobic001G403700--Sobic002G296300 Sobic001G403700--Sobic003G248600 Sobic008G132800 Sobic008G132800 Sobic001G403700--Sobic008G132800 Sobic002G214900 Sobic002G214900 Sobic001G403700--Sobic002G214900 Sobic001G403700--Sobic010G213400 Sobic001G330700--Sobic009G152200 Sobic001G147200 Sobic001G147200 Sobic001G330700--Sobic001G147200 Sobic003G019200 Sobic003G019200 Sobic001G330700--Sobic003G019200 Sobic001G399100 Sobic001G399100 Sobic001G330700--Sobic001G399100 Sobic004G058000 Sobic004G058000 Sobic001G330700--Sobic004G058000 Sobic001G330700--Sobic009G111600 Sobic005G117400 Sobic005G117400 Sobic001G330700--Sobic005G117400 Sobic001G330700--Sobic008G161000 Sobic003G061900 Sobic003G061900 Sobic001G330700--Sobic003G061900 Sobic002G263800 Sobic002G263800 Sobic009G016201--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic009G016201--Sobic007G095400 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic009G016201--Sobic001G037000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic003G115800--Sobic007G186300 Sobic004G300900 Sobic004G300900 Sobic003G115800--Sobic004G300900 Sobic003G115800--Sobic003G220600 Sobic003G115800--Sobic002G078400 Sobic003G115800--Sobic010G204300 Sobic003G115800--Sobic001G054200 Sobic002G202300 Sobic002G202300 Sobic003G115800--Sobic002G202300 Sobic004G079100 Sobic004G079100 Sobic003G115800--Sobic004G079100 Sobic003G115800--Sobic004G293700 Sobic003G248600--Sobic003G220600 Sobic003G248600--Sobic007G186300 Sobic007G045600 Sobic007G045600 Sobic003G248600--Sobic007G045600 Sobic005G176000 Sobic005G176000 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic003G248600--Sobic001G403700 Sobic003G248600--Sobic009G146100 Sobic003G248600--Sobic002G296300 Sobic001G073000 Sobic001G073000 Sobic003G248600--Sobic001G073000 Sobic003G249800--Sobic008G161000 Sobic003G249800--Sobic001G037000 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500
Octagon: transcription factors


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