Gene annotation
Transcriptome id Sobic.003G107600.1
Synonym Sb03g009040, HYD1
Functional annotation 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed
UniProt C5XF36
Pfam PF05241
Panther DB PTHR14207 PTHR14207:SF0
NCBI CDD KOG4826; C-8,7 sterol isomerase
KEGG Orthology K01824; cholestenol Delta-isomerase
Gene Ontology GO:0016125; sterol metabolic process GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G20050 : C-8,7 sterol isomerase
RAP-DB (Rice) LOC_Os01g01369.1 : 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a035390
Brachypodium KQK02761
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G182600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
2 Sobic.002G259000 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
3 Sobic.010G173100 elongation factor 1-gamma, putative, expressed K03233: elongation factor 1-gamma
4 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
5 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
6 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
7 Sobic.010G260100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
8 Sobic.001G046300 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
9 Sobic.010G182300 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
10 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
11 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
12 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
13 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
14 Sobic.007G095400 expressed protein -
15 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
16 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
17 Sobic.008G161000 protein kinase domain containing protein, expressed -
18 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
19 Sobic.004G103800 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
20 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit


Gene co-expression network
sample Sobic003G107600 Sobic003G107600 Sobic010G182600 Sobic010G182600 Sobic003G107600--Sobic010G182600 Sobic002G259000 Sobic002G259000 Sobic003G107600--Sobic002G259000 Sobic010G173100 Sobic010G173100 Sobic003G107600--Sobic010G173100 Sobic002G258800 Sobic002G258800 Sobic003G107600--Sobic002G258800 Sobic004G152400 Sobic004G152400 Sobic003G107600--Sobic004G152400 Sobic010G259900 Sobic010G259900 Sobic003G107600--Sobic010G259900 Sobic010G260100 Sobic010G260100 Sobic003G107600--Sobic010G260100 Sobic001G046300 Sobic001G046300 Sobic003G107600--Sobic001G046300 Sobic010G182300 Sobic010G182300 Sobic003G107600--Sobic010G182300 Sobic010G182600--Sobic002G259000 Sobic010G182600--Sobic001G046300 Sobic010G182200 Sobic010G182200 Sobic010G182600--Sobic010G182200 Sobic002G364100 Sobic002G364100 Sobic010G182600--Sobic002G364100 Sobic004G145801 Sobic004G145801 Sobic010G182600--Sobic004G145801 Sobic001G091801 Sobic001G091801 Sobic010G182600--Sobic001G091801 Sobic009G065400 Sobic009G065400 Sobic010G182600--Sobic009G065400 Sobic002G406500 Sobic002G406500 Sobic010G182600--Sobic002G406500 Sobic002G364500 Sobic002G364500 Sobic010G182600--Sobic002G364500 Sobic004G103800 Sobic004G103800 Sobic002G259000--Sobic004G103800 Sobic004G152700 Sobic004G152700 Sobic002G259000--Sobic004G152700 Sobic002G259000--Sobic010G182600 Sobic002G259000--Sobic001G046300 Sobic002G259000--Sobic010G182300 Sobic002G259000--Sobic004G145801 Sobic002G259000--Sobic002G258800 Sobic004G104100 Sobic004G104100 Sobic002G259000--Sobic004G104100 Sobic002G259000--Sobic002G364100 Sobic002G263800 Sobic002G263800 Sobic010G173100--Sobic002G263800 Sobic002G373800 Sobic002G373800 Sobic010G173100--Sobic002G373800 Sobic010G173100--Sobic003G107600 Sobic010G173100--Sobic010G182600 Sobic010G173100--Sobic009G065400 Sobic008G161800 Sobic008G161800 Sobic010G173100--Sobic008G161800 Sobic010G173100--Sobic002G406500 Sobic001G011200 Sobic001G011200 Sobic010G173100--Sobic001G011200 Sobic010G173100--Sobic001G046300 Sobic002G258800--Sobic010G182300 Sobic002G258800--Sobic002G259000 Sobic002G258800--Sobic004G152700 Sobic002G258800--Sobic004G152400 Sobic002G258800--Sobic001G046300 Sobic002G258800--Sobic004G103800 Sobic002G258800--Sobic010G259900 Sobic003G321700 Sobic003G321700 Sobic002G258800--Sobic003G321700 Sobic002G258800--Sobic009G065400 Sobic004G152400--Sobic002G258800 Sobic004G152400--Sobic004G152700 Sobic004G152400--Sobic002G259000 Sobic004G152400--Sobic010G182300 Sobic004G152400--Sobic004G103800 Sobic004G152400--Sobic003G107600 Sobic001G505100 Sobic001G505100 Sobic004G152400--Sobic001G505100 Sobic010G029400 Sobic010G029400 Sobic004G152400--Sobic010G029400 Sobic004G152400--Sobic010G259900 Sobic010G259900--Sobic010G260100 Sobic004G104300 Sobic004G104300 Sobic010G259900--Sobic004G104300 Sobic003G322400 Sobic003G322400 Sobic010G259900--Sobic003G322400 Sobic007G212600 Sobic007G212600 Sobic010G259900--Sobic007G212600 Sobic010G259900--Sobic004G103800 Sobic010G259900--Sobic003G321700 Sobic007G018300 Sobic007G018300 Sobic010G259900--Sobic007G018300 Sobic010G259900--Sobic001G091801 Sobic010G259900--Sobic001G046300 Sobic010G260100--Sobic010G259900 Sobic010G260100--Sobic007G212600 Sobic010G260100--Sobic003G321700 Sobic010G260100--Sobic004G104300 Sobic010G260100--Sobic003G322400 Sobic010G260100--Sobic001G046300 Sobic010G260100--Sobic001G091801 Sobic010G260100--Sobic004G103800 Sobic001G046100 Sobic001G046100 Sobic010G260100--Sobic001G046100 Sobic001G046300--Sobic007G212600 Sobic001G046300--Sobic004G103800 Sobic001G046300--Sobic001G091801 Sobic001G046300--Sobic002G364100 Sobic001G046300--Sobic002G259000 Sobic001G046300--Sobic004G104100 Sobic001G046300--Sobic001G011200 Sobic001G046300--Sobic004G104300 Sobic009G163800 Sobic009G163800 Sobic001G046300--Sobic009G163800 Sobic010G182300--Sobic002G258800 Sobic010G182300--Sobic002G259000 Sobic010G182300--Sobic004G152700 Sobic010G182300--Sobic004G103800 Sobic010G182300--Sobic010G259900 Sobic010G182300--Sobic001G046300 Sobic010G182300--Sobic010G260100 Sobic010G182300--Sobic009G065400 Sobic010G182300--Sobic010G182600
Octagon: transcription factors


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