Gene annotation
Transcriptome id Sobic.006G208800.1
Synonym Sb06g027960, ECT5
Functional annotation YT521-B, putative, expressed
UniProt A0A1B6PN10
Pfam PF04146
Panther DB PTHR12357 PTHR12357:SF28
NCBI CDD KOG1901; Uncharacterized high-glucose-regulated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13060 : evolutionarily conserved C-terminal region 5
RAP-DB (Rice) LOC_Os04g51940.1 : YT521-B, putative, expressed
MaizeGDB (Corn) Zm00025a009854
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G036000 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
2 Sobic.001G381800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
4 Sobic.004G325700 CYPRO4, putative, expressed -
5 Sobic.006G263100 expressed protein -
6 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
7 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
8 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
9 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
10 Sobic.003G376700 glycosyl transferase, putative, expressed -
11 Sobic.010G204300 expressed protein -
12 Sobic.003G108200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
14 Sobic.003G061900 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
15 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
16 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G356700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G056500 staphylococcal nuclease homologue, putative, expressed -
19 Sobic.002G236200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor BIM2, putative, expressed -
20 Sobic.002G395600 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic006G208800 Sobic006G208800 Sobic003G036000 Sobic003G036000 Sobic006G208800--Sobic003G036000 Sobic001G381800 Sobic001G381800 Sobic006G208800--Sobic001G381800 Sobic006G218700 Sobic006G218700 Sobic006G208800--Sobic006G218700 Sobic004G325700 Sobic004G325700 Sobic006G208800--Sobic004G325700 Sobic006G263100 Sobic006G263100 Sobic006G208800--Sobic006G263100 Sobic007G011000 Sobic007G011000 Sobic006G208800--Sobic007G011000 Sobic004G280800 Sobic004G280800 Sobic006G208800--Sobic004G280800 Sobic001G464900 Sobic001G464900 Sobic006G208800--Sobic001G464900 Sobic003G396000 Sobic003G396000 Sobic006G208800--Sobic003G396000 Sobic009G159900 Sobic009G159900 Sobic003G036000--Sobic009G159900 Sobic003G036000--Sobic006G208800 Sobic003G036000--Sobic006G263100 Sobic007G101800 Sobic007G101800 Sobic003G036000--Sobic007G101800 Sobic002G026300 Sobic002G026300 Sobic003G036000--Sobic002G026300 Sobic003G036000--Sobic007G011000 Sobic003G056500 Sobic003G056500 Sobic003G036000--Sobic003G056500 Sobic010G200700 Sobic010G200700 Sobic003G036000--Sobic010G200700 Sobic010G052800 Sobic010G052800 Sobic003G036000--Sobic010G052800 Sobic001G515500 Sobic001G515500 Sobic001G381800--Sobic001G515500 Sobic001G381800--Sobic006G208800 Sobic001G076000 Sobic001G076000 Sobic001G381800--Sobic001G076000 Sobic001G381800--Sobic006G218700 Sobic009G011700 Sobic009G011700 Sobic001G381800--Sobic009G011700 Sobic001G478300 Sobic001G478300 Sobic001G381800--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic001G381800--Sobic006G257900 Sobic004G188300 Sobic004G188300 Sobic001G381800--Sobic004G188300 Sobic001G427800 Sobic001G427800 Sobic001G381800--Sobic001G427800 Sobic009G134600 Sobic009G134600 Sobic006G218700--Sobic009G134600 Sobic006G218700--Sobic003G396000 Sobic003G044200 Sobic003G044200 Sobic006G218700--Sobic003G044200 Sobic003G119800 Sobic003G119800 Sobic006G218700--Sobic003G119800 Sobic003G379700 Sobic003G379700 Sobic006G218700--Sobic003G379700 Sobic006G218700--Sobic001G076000 Sobic009G167600 Sobic009G167600 Sobic006G218700--Sobic009G167600 Sobic006G218700--Sobic003G056500 Sobic003G376700 Sobic003G376700 Sobic006G218700--Sobic003G376700 Sobic008G161000 Sobic008G161000 Sobic004G325700--Sobic008G161000 Sobic006G179500 Sobic006G179500 Sobic004G325700--Sobic006G179500 Sobic003G181500 Sobic003G181500 Sobic004G325700--Sobic003G181500 Sobic002G140300 Sobic002G140300 Sobic004G325700--Sobic002G140300 Sobic003G249800 Sobic003G249800 Sobic004G325700--Sobic003G249800 Sobic001G304700 Sobic001G304700 Sobic004G325700--Sobic001G304700 Sobic009G033700 Sobic009G033700 Sobic004G325700--Sobic009G033700 Sobic001G095300 Sobic001G095300 Sobic004G325700--Sobic001G095300 Sobic006G062800 Sobic006G062800 Sobic004G325700--Sobic006G062800 Sobic006G263100--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic006G263100--Sobic010G246000 Sobic001G290400 Sobic001G290400 Sobic006G263100--Sobic001G290400 Sobic002G379400 Sobic002G379400 Sobic006G263100--Sobic002G379400 Sobic002G330300 Sobic002G330300 Sobic006G263100--Sobic002G330300 Sobic001G147200 Sobic001G147200 Sobic006G263100--Sobic001G147200 Sobic002G294700 Sobic002G294700 Sobic006G263100--Sobic002G294700 Sobic010G228000 Sobic010G228000 Sobic006G263100--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic006G263100--Sobic001G409900 Sobic002G118600 Sobic002G118600 Sobic007G011000--Sobic002G118600 Sobic007G011000--Sobic002G330300 Sobic007G011000--Sobic010G228000 Sobic007G212200 Sobic007G212200 Sobic007G011000--Sobic007G212200 Sobic007G011000--Sobic004G280800 Sobic003G425200 Sobic003G425200 Sobic007G011000--Sobic003G425200 Sobic002G354900 Sobic002G354900 Sobic007G011000--Sobic002G354900 Sobic010G041700 Sobic010G041700 Sobic007G011000--Sobic010G041700 Sobic004G025000 Sobic004G025000 Sobic007G011000--Sobic004G025000 Sobic004G280800--Sobic010G228000 Sobic004G280800--Sobic006G263100 Sobic004G280800--Sobic002G118600 Sobic004G280800--Sobic001G290400 Sobic003G338900 Sobic003G338900 Sobic004G280800--Sobic003G338900 Sobic004G280800--Sobic004G025000 Sobic004G280800--Sobic007G011000 Sobic004G053200 Sobic004G053200 Sobic004G280800--Sobic004G053200 Sobic001G189700 Sobic001G189700 Sobic004G280800--Sobic001G189700 Sobic009G248500 Sobic009G248500 Sobic001G464900--Sobic009G248500 Sobic001G322200 Sobic001G322200 Sobic001G464900--Sobic001G322200 Sobic009G027900 Sobic009G027900 Sobic001G464900--Sobic009G027900 Sobic006G159600 Sobic006G159600 Sobic001G464900--Sobic006G159600 Sobic005G228900 Sobic005G228900 Sobic001G464900--Sobic005G228900 Sobic001G173300 Sobic001G173300 Sobic001G464900--Sobic001G173300 Sobic007G198100 Sobic007G198100 Sobic001G464900--Sobic007G198100 Sobic002G356101 Sobic002G356101 Sobic001G464900--Sobic002G356101 Sobic010G065900 Sobic010G065900 Sobic001G464900--Sobic010G065900 Sobic001G441600 Sobic001G441600 Sobic003G396000--Sobic001G441600 Sobic003G396000--Sobic006G218700 Sobic003G396000--Sobic003G379700 Sobic010G204300 Sobic010G204300 Sobic003G396000--Sobic010G204300 Sobic003G396000--Sobic001G076000 Sobic003G332401 Sobic003G332401 Sobic003G396000--Sobic003G332401 Sobic004G293700 Sobic004G293700 Sobic003G396000--Sobic004G293700 Sobic003G396000--Sobic001G478300 Sobic009G059700 Sobic009G059700 Sobic003G396000--Sobic009G059700
Octagon: transcription factors


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