Gene annotation
Transcriptome id Sobic.010G009600.3,Sobic.010G009600.4,Sobic.010G009600.5
Synonym
Functional annotation OsFBX182 - F-box domain containing protein, expressed
UniProt A0A1W0VR17 , A0A194YGP3
Pfam -
Panther DB PTHR33800 PTHR33800:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65760 : Protein of unknown function (DUF295)
RAP-DB (Rice) LOC_Os06g02110.1 : OsFBX182 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G257500 expressed protein -
2 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.008G160600 tesmin/TSO1-like CXC domain containing protein, expressed -
4 Sobic.001G534400 - -
5 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
6 Sobic.006G100266 - -
7 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -
8 Sobic.004G215200 expressed protein -
9 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
10 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
11 Sobic.008G174500 expressed protein -
12 Sobic.006G272300 pentatricopeptide, putative, expressed -
13 Sobic.010G036901 - -
14 Sobic.001G196800 CAMK_CAMK_like.40 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.010G038900 expressed protein -
16 Sobic.010G013400 exosome complex exonuclease rrp4, putative, expressed -
17 Sobic.006G208200 GHMP kinases ATP-binding protein, putative, expressed K18677: galacturonokinase
18 Sobic.004G198300 expressed protein -
19 Sobic.010G223500 dnaJ domain containing protein, expressed -
20 Sobic.001G485500 - -


Gene co-expression network
sample Sobic010G009600 Sobic010G009600 Sobic010G257500 Sobic010G257500 Sobic010G009600--Sobic010G257500 Sobic002G274700 Sobic002G274700 Sobic010G009600--Sobic002G274700 Sobic008G160600 Sobic008G160600 Sobic010G009600--Sobic008G160600 Sobic001G534400 Sobic001G534400 Sobic010G009600--Sobic001G534400 Sobic008G087200 Sobic008G087200 Sobic010G009600--Sobic008G087200 Sobic006G100266 Sobic006G100266 Sobic010G009600--Sobic006G100266 Sobic003G042200 Sobic003G042200 Sobic010G009600--Sobic003G042200 Sobic004G215200 Sobic004G215200 Sobic010G009600--Sobic004G215200 Sobic006G184200 Sobic006G184200 Sobic010G009600--Sobic006G184200 Sobic010G257500--Sobic010G009600 Sobic003G343200 Sobic003G343200 Sobic010G257500--Sobic003G343200 Sobic010G257500--Sobic001G534400 Sobic006G127200 Sobic006G127200 Sobic010G257500--Sobic006G127200 Sobic010G013400 Sobic010G013400 Sobic010G257500--Sobic010G013400 Sobic010G018900 Sobic010G018900 Sobic010G257500--Sobic010G018900 Sobic002G271400 Sobic002G271400 Sobic010G257500--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic010G257500--Sobic004G014100 Sobic010G038900 Sobic010G038900 Sobic010G257500--Sobic010G038900 Sobic010G051800 Sobic010G051800 Sobic002G274700--Sobic010G051800 Sobic002G322400 Sobic002G322400 Sobic002G274700--Sobic002G322400 Sobic002G304500 Sobic002G304500 Sobic002G274700--Sobic002G304500 Sobic002G274700--Sobic008G087200 Sobic003G255700 Sobic003G255700 Sobic002G274700--Sobic003G255700 Sobic001G131900 Sobic001G131900 Sobic002G274700--Sobic001G131900 Sobic002G274700--Sobic010G009600 Sobic003G293400 Sobic003G293400 Sobic002G274700--Sobic003G293400 Sobic002G274700--Sobic006G100266 Sobic008G160600--Sobic006G184200 Sobic008G160600--Sobic010G009600 Sobic010G223500 Sobic010G223500 Sobic008G160600--Sobic010G223500 Sobic008G160600--Sobic010G257500 Sobic001G485500 Sobic001G485500 Sobic008G160600--Sobic001G485500 Sobic004G198300 Sobic004G198300 Sobic008G160600--Sobic004G198300 Sobic008G160600--Sobic010G018900 Sobic008G160600--Sobic008G087200 Sobic008G160600--Sobic004G215200 Sobic001G534400--Sobic010G257500 Sobic001G534400--Sobic003G343200 Sobic001G534400--Sobic010G009600 Sobic001G534400--Sobic008G087200 Sobic001G534400--Sobic004G014100 Sobic005G160200 Sobic005G160200 Sobic001G534400--Sobic005G160200 Sobic001G534400--Sobic006G184200 Sobic008G174500 Sobic008G174500 Sobic001G534400--Sobic008G174500 Sobic001G534400--Sobic002G271400 Sobic008G087200--Sobic002G274700 Sobic008G087200--Sobic006G100266 Sobic008G087200--Sobic010G009600 Sobic008G087200--Sobic001G534400 Sobic008G087200--Sobic010G038900 Sobic006G272300 Sobic006G272300 Sobic008G087200--Sobic006G272300 Sobic008G087200--Sobic006G184200 Sobic008G087200--Sobic010G018900 Sobic008G087200--Sobic003G343200 Sobic006G100266--Sobic003G255700 Sobic003G308300 Sobic003G308300 Sobic006G100266--Sobic003G308300 Sobic001G305900 Sobic001G305900 Sobic006G100266--Sobic001G305900 Sobic006G100266--Sobic002G274700 Sobic003G270100 Sobic003G270100 Sobic006G100266--Sobic003G270100 Sobic006G100266--Sobic008G087200 Sobic006G100266--Sobic002G322400 Sobic009G186700 Sobic009G186700 Sobic006G100266--Sobic009G186700 Sobic006G100266--Sobic010G009600 Sobic003G042200--Sobic008G174500 Sobic001G194100 Sobic001G194100 Sobic003G042200--Sobic001G194100 Sobic003G062101 Sobic003G062101 Sobic003G042200--Sobic003G062101 Sobic009G156200 Sobic009G156200 Sobic003G042200--Sobic009G156200 Sobic003G042200--Sobic006G184200 Sobic003G379900 Sobic003G379900 Sobic003G042200--Sobic003G379900 Sobic003G042200--Sobic010G009600 Sobic002G349000 Sobic002G349000 Sobic003G042200--Sobic002G349000 Sobic002G238800 Sobic002G238800 Sobic003G042200--Sobic002G238800 Sobic001G053350 Sobic001G053350 Sobic004G215200--Sobic001G053350 Sobic010G062900 Sobic010G062900 Sobic004G215200--Sobic010G062900 Sobic006G208200 Sobic006G208200 Sobic004G215200--Sobic006G208200 Sobic004G215200--Sobic001G485500 Sobic001G499500 Sobic001G499500 Sobic004G215200--Sobic001G499500 Sobic009G163400 Sobic009G163400 Sobic004G215200--Sobic009G163400 Sobic002G309100 Sobic002G309100 Sobic004G215200--Sobic002G309100 Sobic007G086600 Sobic007G086600 Sobic004G215200--Sobic007G086600 Sobic010G252100 Sobic010G252100 Sobic004G215200--Sobic010G252100 Sobic006G184200--Sobic008G160600 Sobic006G184200--Sobic010G038900 Sobic002G354800 Sobic002G354800 Sobic006G184200--Sobic002G354800 Sobic006G184200--Sobic008G174500 Sobic006G184200--Sobic003G042200 Sobic002G230400 Sobic002G230400 Sobic006G184200--Sobic002G230400 Sobic006G184200--Sobic008G087200 Sobic006G184200--Sobic010G009600 Sobic006G184200--Sobic003G379900
Octagon: transcription factors


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