Gene annotation
Transcriptome id Sobic.004G198300.1
Synonym Sb04g024495
Functional annotation expressed protein
UniProt A0A194YRS8
Pfam -
Panther DB PTHR22850 PTHR22850:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12920 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os02g37856.1 : expressed protein
MaizeGDB (Corn) Zm00025a021351
Brachypodium KQK00113
Barley HORVU6Hr1G052660.26 , HORVU6Hr1G052660.27 , HORVU6Hr1G052660.24 , HORVU6Hr1G052660.25 , HORVU6Hr1G052660.22 , HORVU6Hr1G052660.23 , HORVU6Hr1G052660.20 , HORVU6Hr1G052660.21 , HORVU6Hr1G052660.28 , HORVU6Hr1G052660.29 , HORVU6Hr1G052660.53 , HORVU6Hr1G052660.52 , HORVU6Hr1G052660.51 , HORVU6Hr1G052660.50 , HORVU6Hr1G052660.57 , HORVU6Hr1G052660.56 , HORVU6Hr1G052660.55 , HORVU6Hr1G052660.54 , HORVU6Hr1G052660.30 , HORVU6Hr1G052660.34 , HORVU6Hr1G052660.19 , HORVU6Hr1G052660.18 , HORVU6Hr1G052660.17 , HORVU6Hr1G052660.16 , HORVU6Hr1G052660.15 , HORVU6Hr1G052660.14 , HORVU6Hr1G052660.13 , HORVU6Hr1G052660.12 , HORVU6Hr1G052660.11 , HORVU6Hr1G052660.10 , HORVU6Hr1G052660.40 , HORVU6Hr1G052660.41 , HORVU6Hr1G052660.42 , HORVU6Hr1G052660.43 , HORVU6Hr1G052660.44 , HORVU6Hr1G052660.45 , HORVU6Hr1G052660.46 , HORVU6Hr1G052660.47 , HORVU6Hr1G052660.48 , HORVU6Hr1G052660.33 , HORVU6Hr1G052660.32 , HORVU6Hr1G052660.35 , HORVU6Hr1G052660.37 , HORVU6Hr1G052660.36 , HORVU6Hr1G052660.39 , HORVU6Hr1G052660.38 , HORVU6Hr1G052660.7 , HORVU6Hr1G052660.6 , HORVU6Hr1G052660.5 , HORVU6Hr1G052660.4 , HORVU6Hr1G052660.3 , HORVU6Hr1G052660.2 , HORVU6Hr1G052660.1
Wheat TraesCS6B02G225500 , TraesCS6D02G190200 , TraesCS6A02G205100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
2 Sobic.004G026600 - -
3 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
4 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
5 Sobic.005G067966 - -
6 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
7 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
8 Sobic.002G392400 expressed protein -
9 Sobic.005G087300 protein kinase family protein, putative, expressed -
10 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
11 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
12 Sobic.001G433600 - -
13 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
14 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
15 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.005G048600 expressed protein -
17 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
18 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
19 Sobic.003G004800 ATP binding protein, putative, expressed -
20 Sobic.005G060100 growth regulator related protein, putative, expressed -


Gene co-expression network
sample Sobic004G198300 Sobic004G198300 Sobic003G293400 Sobic003G293400 Sobic004G198300--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G198300--Sobic004G026600 Sobic007G086600 Sobic007G086600 Sobic004G198300--Sobic007G086600 Sobic010G255400 Sobic010G255400 Sobic004G198300--Sobic010G255400 Sobic005G067966 Sobic005G067966 Sobic004G198300--Sobic005G067966 Sobic002G308000 Sobic002G308000 Sobic004G198300--Sobic002G308000 Sobic002G313100 Sobic002G313100 Sobic004G198300--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic004G198300--Sobic002G392400 Sobic005G087300 Sobic005G087300 Sobic004G198300--Sobic005G087300 Sobic001G131900 Sobic001G131900 Sobic003G293400--Sobic001G131900 Sobic003G352900 Sobic003G352900 Sobic003G293400--Sobic003G352900 Sobic003G293400--Sobic004G198300 Sobic001G076600 Sobic001G076600 Sobic003G293400--Sobic001G076600 Sobic002G420100 Sobic002G420100 Sobic003G293400--Sobic002G420100 Sobic004G038400 Sobic004G038400 Sobic003G293400--Sobic004G038400 Sobic003G293400--Sobic004G026600 Sobic004G298600 Sobic004G298600 Sobic003G293400--Sobic004G298600 Sobic007G144100 Sobic007G144100 Sobic003G293400--Sobic007G144100 Sobic004G026600--Sobic003G293400 Sobic004G026600--Sobic004G298600 Sobic009G025700 Sobic009G025700 Sobic004G026600--Sobic009G025700 Sobic004G026600--Sobic004G198300 Sobic009G220700 Sobic009G220700 Sobic004G026600--Sobic009G220700 Sobic004G026600--Sobic002G308000 Sobic009G042000 Sobic009G042000 Sobic004G026600--Sobic009G042000 Sobic004G026600--Sobic001G131900 Sobic006G265800 Sobic006G265800 Sobic004G026600--Sobic006G265800 Sobic003G004800 Sobic003G004800 Sobic007G086600--Sobic003G004800 Sobic001G117900 Sobic001G117900 Sobic007G086600--Sobic001G117900 Sobic005G048600 Sobic005G048600 Sobic007G086600--Sobic005G048600 Sobic007G086600--Sobic003G293400 Sobic003G022000 Sobic003G022000 Sobic007G086600--Sobic003G022000 Sobic002G348400 Sobic002G348400 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic002G193500 Sobic002G193500 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000 Sobic008G007800 Sobic008G007800 Sobic010G255400--Sobic008G007800 Sobic004G064800 Sobic004G064800 Sobic010G255400--Sobic004G064800 Sobic005G201200 Sobic005G201200 Sobic010G255400--Sobic005G201200 Sobic002G016000 Sobic002G016000 Sobic010G255400--Sobic002G016000 Sobic008G041300 Sobic008G041300 Sobic010G255400--Sobic008G041300 Sobic002G304500 Sobic002G304500 Sobic010G255400--Sobic002G304500 Sobic010G255400--Sobic001G076600 Sobic002G158300 Sobic002G158300 Sobic010G255400--Sobic002G158300 Sobic006G199500 Sobic006G199500 Sobic010G255400--Sobic006G199500 Sobic005G067966--Sobic004G198300 Sobic005G067966--Sobic003G293400 Sobic004G353300 Sobic004G353300 Sobic005G067966--Sobic004G353300 Sobic005G067966--Sobic001G433600 Sobic005G067966--Sobic002G392400 Sobic001G305900 Sobic001G305900 Sobic005G067966--Sobic001G305900 Sobic005G067966--Sobic002G313100 Sobic007G189100 Sobic007G189100 Sobic005G067966--Sobic007G189100 Sobic007G105700 Sobic007G105700 Sobic005G067966--Sobic007G105700 Sobic002G308000--Sobic002G392400 Sobic002G308000--Sobic007G105700 Sobic002G308000--Sobic001G117900 Sobic002G308000--Sobic001G433600 Sobic002G308000--Sobic003G293400 Sobic010G253200 Sobic010G253200 Sobic002G308000--Sobic010G253200 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G192900 Sobic002G192900 Sobic002G308000--Sobic002G192900 Sobic002G313100--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G313100--Sobic006G232800 Sobic002G313100--Sobic007G105700 Sobic002G313100--Sobic003G004800 Sobic002G313100--Sobic007G086600 Sobic002G313100--Sobic003G293400 Sobic002G313100--Sobic005G087300 Sobic001G280500 Sobic001G280500 Sobic002G313100--Sobic001G280500 Sobic002G313100--Sobic001G076600 Sobic002G392400--Sobic007G105700 Sobic002G392400--Sobic002G308000 Sobic002G392400--Sobic001G117900 Sobic002G392400--Sobic002G348400 Sobic002G392400--Sobic002G313100 Sobic002G392400--Sobic003G293400 Sobic002G392400--Sobic001G131900 Sobic002G392400--Sobic006G232800 Sobic010G153400 Sobic010G153400 Sobic002G392400--Sobic010G153400 Sobic009G040250 Sobic009G040250 Sobic005G087300--Sobic009G040250 Sobic005G087300--Sobic002G313100 Sobic002G066800 Sobic002G066800 Sobic005G087300--Sobic002G066800 Sobic005G087300--Sobic004G198300 Sobic005G087300--Sobic007G086600 Sobic003G393200 Sobic003G393200 Sobic005G087300--Sobic003G393200 Sobic005G087300--Sobic007G105700 Sobic002G322400 Sobic002G322400 Sobic005G087300--Sobic002G322400 Sobic010G160300 Sobic010G160300 Sobic005G087300--Sobic010G160300
Octagon: transcription factors


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