Gene annotation
Transcriptome id Sobic.005G067966.1
Synonym -
Functional annotation -
UniProt A0A1Z5RH20
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g43980.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G198300 expressed protein -
2 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
3 Sobic.004G353300 growth regulator related protein, putative, expressed -
4 Sobic.001G433600 - -
5 Sobic.002G392400 expressed protein -
6 Sobic.001G305900 GTP binding protein, putative, expressed -
7 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
8 Sobic.007G189100 SFC, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
9 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.005G087300 protein kinase family protein, putative, expressed -
11 Sobic.003G393200 expressed protein -
12 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
13 Sobic.005G063200 expressed protein -
14 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
15 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
16 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
17 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.005G060100 growth regulator related protein, putative, expressed -
19 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
20 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -


Gene co-expression network
sample Sobic005G067966 Sobic005G067966 Sobic004G198300 Sobic004G198300 Sobic005G067966--Sobic004G198300 Sobic003G293400 Sobic003G293400 Sobic005G067966--Sobic003G293400 Sobic004G353300 Sobic004G353300 Sobic005G067966--Sobic004G353300 Sobic001G433600 Sobic001G433600 Sobic005G067966--Sobic001G433600 Sobic002G392400 Sobic002G392400 Sobic005G067966--Sobic002G392400 Sobic001G305900 Sobic001G305900 Sobic005G067966--Sobic001G305900 Sobic002G313100 Sobic002G313100 Sobic005G067966--Sobic002G313100 Sobic007G189100 Sobic007G189100 Sobic005G067966--Sobic007G189100 Sobic007G105700 Sobic007G105700 Sobic005G067966--Sobic007G105700 Sobic004G198300--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G198300--Sobic004G026600 Sobic007G086600 Sobic007G086600 Sobic004G198300--Sobic007G086600 Sobic010G255400 Sobic010G255400 Sobic004G198300--Sobic010G255400 Sobic004G198300--Sobic005G067966 Sobic002G308000 Sobic002G308000 Sobic004G198300--Sobic002G308000 Sobic004G198300--Sobic002G313100 Sobic004G198300--Sobic002G392400 Sobic005G087300 Sobic005G087300 Sobic004G198300--Sobic005G087300 Sobic001G131900 Sobic001G131900 Sobic003G293400--Sobic001G131900 Sobic003G352900 Sobic003G352900 Sobic003G293400--Sobic003G352900 Sobic003G293400--Sobic004G198300 Sobic001G076600 Sobic001G076600 Sobic003G293400--Sobic001G076600 Sobic002G420100 Sobic002G420100 Sobic003G293400--Sobic002G420100 Sobic004G038400 Sobic004G038400 Sobic003G293400--Sobic004G038400 Sobic003G293400--Sobic004G026600 Sobic004G298600 Sobic004G298600 Sobic003G293400--Sobic004G298600 Sobic007G144100 Sobic007G144100 Sobic003G293400--Sobic007G144100 Sobic004G353300--Sobic001G433600 Sobic004G353300--Sobic007G189100 Sobic004G353300--Sobic007G105700 Sobic004G353300--Sobic002G392400 Sobic010G123100 Sobic010G123100 Sobic004G353300--Sobic010G123100 Sobic004G353300--Sobic002G308000 Sobic004G353300--Sobic005G067966 Sobic001G308500 Sobic001G308500 Sobic004G353300--Sobic001G308500 Sobic008G085950 Sobic008G085950 Sobic004G353300--Sobic008G085950 Sobic001G117900 Sobic001G117900 Sobic001G433600--Sobic001G117900 Sobic001G433600--Sobic002G308000 Sobic005G060100 Sobic005G060100 Sobic001G433600--Sobic005G060100 Sobic001G433600--Sobic007G105700 Sobic009G054400 Sobic009G054400 Sobic001G433600--Sobic009G054400 Sobic001G433600--Sobic004G298600 Sobic001G433600--Sobic007G189100 Sobic001G433600--Sobic001G131900 Sobic001G433600--Sobic007G086600 Sobic002G392400--Sobic007G105700 Sobic002G392400--Sobic002G308000 Sobic002G392400--Sobic001G117900 Sobic002G348400 Sobic002G348400 Sobic002G392400--Sobic002G348400 Sobic002G392400--Sobic002G313100 Sobic002G392400--Sobic003G293400 Sobic002G392400--Sobic001G131900 Sobic006G232800 Sobic006G232800 Sobic002G392400--Sobic006G232800 Sobic010G153400 Sobic010G153400 Sobic002G392400--Sobic010G153400 Sobic007G218600 Sobic007G218600 Sobic001G305900--Sobic007G218600 Sobic001G050500 Sobic001G050500 Sobic001G305900--Sobic001G050500 Sobic005G063200 Sobic005G063200 Sobic001G305900--Sobic005G063200 Sobic009G186700 Sobic009G186700 Sobic001G305900--Sobic009G186700 Sobic003G255700 Sobic003G255700 Sobic001G305900--Sobic003G255700 Sobic001G305900--Sobic002G348400 Sobic001G280500 Sobic001G280500 Sobic001G305900--Sobic001G280500 Sobic002G158300 Sobic002G158300 Sobic001G305900--Sobic002G158300 Sobic003G308300 Sobic003G308300 Sobic001G305900--Sobic003G308300 Sobic002G313100--Sobic002G392400 Sobic002G313100--Sobic006G232800 Sobic002G313100--Sobic007G105700 Sobic003G004800 Sobic003G004800 Sobic002G313100--Sobic003G004800 Sobic002G313100--Sobic007G086600 Sobic002G313100--Sobic003G293400 Sobic002G313100--Sobic005G087300 Sobic002G313100--Sobic001G280500 Sobic002G313100--Sobic001G076600 Sobic007G189100--Sobic001G433600 Sobic003G200000 Sobic003G200000 Sobic007G189100--Sobic003G200000 Sobic007G189100--Sobic001G308500 Sobic007G189100--Sobic001G131900 Sobic007G189100--Sobic002G392400 Sobic005G045800 Sobic005G045800 Sobic007G189100--Sobic005G045800 Sobic007G043700 Sobic007G043700 Sobic007G189100--Sobic007G043700 Sobic007G189100--Sobic003G352900 Sobic007G189100--Sobic004G353300 Sobic007G105700--Sobic002G392400 Sobic007G105700--Sobic002G308000 Sobic007G105700--Sobic005G060100 Sobic007G105700--Sobic001G433600 Sobic001G385300 Sobic001G385300 Sobic007G105700--Sobic001G385300 Sobic007G105700--Sobic001G308500 Sobic007G105700--Sobic004G298600 Sobic007G105700--Sobic008G085950 Sobic007G105700--Sobic001G117900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.