Gene annotation
Transcriptome id Sobic.002G392400.1
Synonym Sb02g040780
Functional annotation expressed protein
UniProt C5X3D3
Pfam -
Panther DB PTHR31469 PTHR31469:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56750 : -
RAP-DB (Rice) LOC_Os03g25110.1 : expressed protein
MaizeGDB (Corn) Zm00025a002612 , Zm00025a015269
Brachypodium PNT77360 , KQK14976 , KQK21570 , KQK21571 , KQK21572 , KQK21573 , PNT77359
Barley HORVU2Hr1G026040.16 , HORVU2Hr1G026040.17 , HORVU2Hr1G026040.14 , HORVU2Hr1G026040.15 , HORVU2Hr1G026040.12 , HORVU2Hr1G026040.13 , HORVU2Hr1G026040.10 , HORVU2Hr1G026040.11 , HORVU2Hr1G026040.8 , HORVU2Hr1G026040.18 , HORVU2Hr1G026040.19 , HORVU2Hr1G026040.5 , HORVU2Hr1G026040.6 , HORVU2Hr1G026040.7 , HORVU2Hr1G026040.1 , HORVU2Hr1G026040.2 , HORVU2Hr1G026040.3 , HORVU2Hr1G026040.9
Wheat TraesCS2A02G146500 , TraesCS2D02G151100 , TraesCS2B02G171800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
3 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
4 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
5 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
6 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
7 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
9 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
10 Sobic.007G189100 SFC, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
11 Sobic.001G433600 - -
12 Sobic.003G004800 ATP binding protein, putative, expressed -
13 Sobic.005G060100 growth regulator related protein, putative, expressed -
14 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
15 Sobic.002G241100 glycosyl transferase 8 domain containing protein, putative, expressed -
16 Sobic.002G239400 OsFBX338 - F-box domain containing protein, expressed -
17 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
18 Sobic.004G353300 growth regulator related protein, putative, expressed -
19 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
20 Sobic.004G198300 expressed protein -


Gene co-expression network
sample Sobic002G392400 Sobic002G392400 Sobic007G105700 Sobic007G105700 Sobic002G392400--Sobic007G105700 Sobic002G308000 Sobic002G308000 Sobic002G392400--Sobic002G308000 Sobic001G117900 Sobic001G117900 Sobic002G392400--Sobic001G117900 Sobic002G348400 Sobic002G348400 Sobic002G392400--Sobic002G348400 Sobic002G313100 Sobic002G313100 Sobic002G392400--Sobic002G313100 Sobic003G293400 Sobic003G293400 Sobic002G392400--Sobic003G293400 Sobic001G131900 Sobic001G131900 Sobic002G392400--Sobic001G131900 Sobic006G232800 Sobic006G232800 Sobic002G392400--Sobic006G232800 Sobic010G153400 Sobic010G153400 Sobic002G392400--Sobic010G153400 Sobic007G105700--Sobic002G392400 Sobic007G105700--Sobic002G308000 Sobic005G060100 Sobic005G060100 Sobic007G105700--Sobic005G060100 Sobic001G433600 Sobic001G433600 Sobic007G105700--Sobic001G433600 Sobic001G385300 Sobic001G385300 Sobic007G105700--Sobic001G385300 Sobic001G308500 Sobic001G308500 Sobic007G105700--Sobic001G308500 Sobic004G298600 Sobic004G298600 Sobic007G105700--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic007G105700--Sobic008G085950 Sobic007G105700--Sobic001G117900 Sobic002G308000--Sobic002G392400 Sobic002G308000--Sobic007G105700 Sobic002G308000--Sobic001G117900 Sobic002G308000--Sobic001G433600 Sobic002G308000--Sobic003G293400 Sobic010G253200 Sobic010G253200 Sobic002G308000--Sobic010G253200 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G192900 Sobic002G192900 Sobic002G308000--Sobic002G192900 Sobic001G117900--Sobic002G308000 Sobic001G117900--Sobic001G433600 Sobic001G117900--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic001G117900--Sobic007G086600 Sobic001G117900--Sobic005G060100 Sobic001G117900--Sobic007G105700 Sobic001G117900--Sobic002G348400 Sobic009G025700 Sobic009G025700 Sobic001G117900--Sobic009G025700 Sobic003G004800 Sobic003G004800 Sobic001G117900--Sobic003G004800 Sobic002G348400--Sobic010G153400 Sobic002G348400--Sobic002G392400 Sobic002G348400--Sobic007G086600 Sobic002G348400--Sobic001G117900 Sobic001G305900 Sobic001G305900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic001G280500 Sobic001G280500 Sobic002G348400--Sobic001G280500 Sobic002G348400--Sobic003G004800 Sobic001G188000 Sobic001G188000 Sobic002G348400--Sobic001G188000 Sobic002G313100--Sobic002G392400 Sobic002G313100--Sobic006G232800 Sobic002G313100--Sobic007G105700 Sobic002G313100--Sobic003G004800 Sobic002G313100--Sobic007G086600 Sobic002G313100--Sobic003G293400 Sobic005G087300 Sobic005G087300 Sobic002G313100--Sobic005G087300 Sobic002G313100--Sobic001G280500 Sobic001G076600 Sobic001G076600 Sobic002G313100--Sobic001G076600 Sobic003G293400--Sobic001G131900 Sobic003G352900 Sobic003G352900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic002G420100 Sobic002G420100 Sobic003G293400--Sobic002G420100 Sobic004G038400 Sobic004G038400 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic007G144100 Sobic007G144100 Sobic003G293400--Sobic007G144100 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic001G131900--Sobic004G038400 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic005G045800 Sobic005G045800 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100 Sobic001G378800 Sobic001G378800 Sobic006G232800--Sobic001G378800 Sobic001G385000 Sobic001G385000 Sobic006G232800--Sobic001G385000 Sobic003G394500 Sobic003G394500 Sobic006G232800--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic006G232800--Sobic001G149000 Sobic010G086300 Sobic010G086300 Sobic006G232800--Sobic010G086300 Sobic006G232800--Sobic001G280500 Sobic006G232800--Sobic002G313100 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic010G153400--Sobic002G348400 Sobic010G153400--Sobic003G004800 Sobic010G153400--Sobic002G392400 Sobic008G022400 Sobic008G022400 Sobic010G153400--Sobic008G022400 Sobic010G153400--Sobic001G131900 Sobic010G153400--Sobic003G293400 Sobic010G153400--Sobic006G265800 Sobic010G153400--Sobic001G117900 Sobic004G328100 Sobic004G328100 Sobic010G153400--Sobic004G328100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.