Gene annotation
Transcriptome id Sobic.002G322400.1,Sobic.002G322400.3,Sobic.002G322400.2
Synonym PDIL5-3, Sb02g035000, ATPDI12, PDI12, ATPDIL5-3
Functional annotation OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed
UniProt A0A1B6QEL4 , A0A1B6QEM6
Pfam PF00085 PF13850 PF07970 PF00085 PF07970 PF13850
Panther DB PTHR10984 PTHR10984:SF37
NCBI CDD KOG2667; COPII vesicle protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27080 : PDI-like 5-4,PDI-like 5-3
RAP-DB (Rice) LOC_Os07g34030.1 : OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed
MaizeGDB (Corn) Zm00025a014815
Brachypodium KQK15951 , KQK15952
Barley HORVU2Hr1G046000.6 , HORVU2Hr1G046000.7 , HORVU2Hr1G046000.4 , HORVU2Hr1G046000.5 , HORVU2Hr1G046000.2 , HORVU2Hr1G046000.3 , HORVU2Hr1G046000.1 , HORVU2Hr1G046000.8 , HORVU2Hr1G046000.9 , HORVU2Hr1G046000.10
Wheat TraesCS2B02G245600 , TraesCS2A02G220100 , TraesCS2D02G225800
Populus -


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cDNA sequences
Sobic.002G322400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
3 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
4 Sobic.004G198300 expressed protein -
5 Sobic.006G100266 - -
6 Sobic.008G019532 - -
7 Sobic.005G087300 protein kinase family protein, putative, expressed -
8 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
9 Sobic.002G392400 expressed protein -
10 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
11 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
12 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
13 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
14 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
15 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
16 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
17 Sobic.005G067966 - -
18 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
19 Sobic.001G305900 GTP binding protein, putative, expressed -
20 Sobic.003G393200 expressed protein -


Gene co-expression network
sample Sobic002G322400 Sobic002G322400 Sobic002G274700 Sobic002G274700 Sobic002G322400--Sobic002G274700 Sobic007G153500 Sobic007G153500 Sobic002G322400--Sobic007G153500 Sobic001G455000 Sobic001G455000 Sobic002G322400--Sobic001G455000 Sobic004G198300 Sobic004G198300 Sobic002G322400--Sobic004G198300 Sobic006G100266 Sobic006G100266 Sobic002G322400--Sobic006G100266 Sobic008G019532 Sobic008G019532 Sobic002G322400--Sobic008G019532 Sobic005G087300 Sobic005G087300 Sobic002G322400--Sobic005G087300 Sobic002G313100 Sobic002G313100 Sobic002G322400--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic002G322400--Sobic002G392400 Sobic010G051800 Sobic010G051800 Sobic002G274700--Sobic010G051800 Sobic002G274700--Sobic002G322400 Sobic002G304500 Sobic002G304500 Sobic002G274700--Sobic002G304500 Sobic008G087200 Sobic008G087200 Sobic002G274700--Sobic008G087200 Sobic003G255700 Sobic003G255700 Sobic002G274700--Sobic003G255700 Sobic001G131900 Sobic001G131900 Sobic002G274700--Sobic001G131900 Sobic010G009600 Sobic010G009600 Sobic002G274700--Sobic010G009600 Sobic003G293400 Sobic003G293400 Sobic002G274700--Sobic003G293400 Sobic002G274700--Sobic006G100266 Sobic002G076500 Sobic002G076500 Sobic007G153500--Sobic002G076500 Sobic007G153500--Sobic002G322400 Sobic001G114200 Sobic001G114200 Sobic007G153500--Sobic001G114200 Sobic007G153500--Sobic002G392400 Sobic007G153500--Sobic005G087300 Sobic003G393200 Sobic003G393200 Sobic007G153500--Sobic003G393200 Sobic001G025700 Sobic001G025700 Sobic007G153500--Sobic001G025700 Sobic007G153500--Sobic001G455000 Sobic009G186700 Sobic009G186700 Sobic007G153500--Sobic009G186700 Sobic004G151200 Sobic004G151200 Sobic001G455000--Sobic004G151200 Sobic003G397900 Sobic003G397900 Sobic001G455000--Sobic003G397900 Sobic007G118500 Sobic007G118500 Sobic001G455000--Sobic007G118500 Sobic001G455000--Sobic008G019532 Sobic001G356100 Sobic001G356100 Sobic001G455000--Sobic001G356100 Sobic003G130900 Sobic003G130900 Sobic001G455000--Sobic003G130900 Sobic001G455000--Sobic001G114200 Sobic001G445500 Sobic001G445500 Sobic001G455000--Sobic001G445500 Sobic003G394500 Sobic003G394500 Sobic001G455000--Sobic003G394500 Sobic004G198300--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G198300--Sobic004G026600 Sobic007G086600 Sobic007G086600 Sobic004G198300--Sobic007G086600 Sobic010G255400 Sobic010G255400 Sobic004G198300--Sobic010G255400 Sobic005G067966 Sobic005G067966 Sobic004G198300--Sobic005G067966 Sobic002G308000 Sobic002G308000 Sobic004G198300--Sobic002G308000 Sobic004G198300--Sobic002G313100 Sobic004G198300--Sobic002G392400 Sobic004G198300--Sobic005G087300 Sobic006G100266--Sobic003G255700 Sobic003G308300 Sobic003G308300 Sobic006G100266--Sobic003G308300 Sobic001G305900 Sobic001G305900 Sobic006G100266--Sobic001G305900 Sobic006G100266--Sobic002G274700 Sobic003G270100 Sobic003G270100 Sobic006G100266--Sobic003G270100 Sobic006G100266--Sobic008G087200 Sobic006G100266--Sobic002G322400 Sobic006G100266--Sobic009G186700 Sobic006G100266--Sobic010G009600 Sobic008G019532--Sobic001G455000 Sobic008G019532--Sobic002G322400 Sobic010G192600 Sobic010G192600 Sobic008G019532--Sobic010G192600 Sobic010G171000 Sobic010G171000 Sobic008G019532--Sobic010G171000 Sobic008G019532--Sobic001G114200 Sobic001G097900 Sobic001G097900 Sobic008G019532--Sobic001G097900 Sobic008G019532--Sobic002G076500 Sobic008G019532--Sobic001G356100 Sobic005G114800 Sobic005G114800 Sobic008G019532--Sobic005G114800 Sobic009G040250 Sobic009G040250 Sobic005G087300--Sobic009G040250 Sobic005G087300--Sobic002G313100 Sobic002G066800 Sobic002G066800 Sobic005G087300--Sobic002G066800 Sobic005G087300--Sobic004G198300 Sobic005G087300--Sobic007G086600 Sobic005G087300--Sobic003G393200 Sobic007G105700 Sobic007G105700 Sobic005G087300--Sobic007G105700 Sobic005G087300--Sobic002G322400 Sobic010G160300 Sobic010G160300 Sobic005G087300--Sobic010G160300 Sobic002G313100--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G313100--Sobic006G232800 Sobic002G313100--Sobic007G105700 Sobic003G004800 Sobic003G004800 Sobic002G313100--Sobic003G004800 Sobic002G313100--Sobic007G086600 Sobic002G313100--Sobic003G293400 Sobic002G313100--Sobic005G087300 Sobic001G280500 Sobic001G280500 Sobic002G313100--Sobic001G280500 Sobic001G076600 Sobic001G076600 Sobic002G313100--Sobic001G076600 Sobic002G392400--Sobic007G105700 Sobic002G392400--Sobic002G308000 Sobic001G117900 Sobic001G117900 Sobic002G392400--Sobic001G117900 Sobic002G348400 Sobic002G348400 Sobic002G392400--Sobic002G348400 Sobic002G392400--Sobic002G313100 Sobic002G392400--Sobic003G293400 Sobic002G392400--Sobic001G131900 Sobic002G392400--Sobic006G232800 Sobic010G153400 Sobic010G153400 Sobic002G392400--Sobic010G153400
Octagon: transcription factors


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