Gene annotation
Transcriptome id Sobic.002G274700.3,Sobic.002G274700.1,Sobic.002G274700.2
Synonym LGT1, GAUT1, Sb02g030820
Functional annotation glycosyl transferase family 8, putative, expressed
UniProt C5X673
Pfam PF01501
Panther DB PTHR32116:SF4 PTHR32116 PTHR32116 PTHR32116:SF4
NCBI CDD -
KEGG Orthology K13648; alpha-1,4-galacturonosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016757transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G61130 : galacturonosyltransferase 1
RAP-DB (Rice) LOC_Os09g36190.2 : glycosyl transferase family 8, putative, expressed
MaizeGDB (Corn) Zm00025a047781 , Zm00025a014430
Brachypodium KQJ91168 , KQK13741
Barley HORVU5Hr1G081520.20 , HORVU5Hr1G081520.21 , HORVU5Hr1G081520.18 , HORVU5Hr1G081520.7 , HORVU5Hr1G081520.6 , HORVU5Hr1G081520.5 , HORVU5Hr1G081520.3 , HORVU5Hr1G081520.2 , HORVU5Hr1G081520.1 , HORVU5Hr1G081520.9 , HORVU5Hr1G081520.8 , HORVU5Hr1G081520.19 , HORVU5Hr1G081520.17 , HORVU5Hr1G081520.16 , HORVU5Hr1G081520.15 , HORVU5Hr1G081520.14 , HORVU5Hr1G081520.13 , HORVU5Hr1G081520.12 , HORVU5Hr1G081520.11
Wheat TraesCS5D02G325800 , TraesCS5D02G325800 , TraesCS5B02G320100 , TraesCS5B02G320100 , TraesCS5B02G320100 , TraesCS5B02G320100 , TraesCS5B02G320100 , TraesCS5A02G319800 , TraesCS5A02G319800 , TraesCS5A02G319800 , TraesCS5A02G319800 , TraesCS5B02G320100
Populus PNT49795 , PNT49794


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cDNA sequences
Sobic.002G274700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G051800 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
3 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
4 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
5 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
6 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
7 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -
8 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
9 Sobic.006G100266 - -
10 Sobic.001G305900 GTP binding protein, putative, expressed -
11 Sobic.002G060400 OsFBX237 - F-box domain containing protein, expressed -
12 Sobic.006G062600 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
13 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
14 Sobic.009G056900 acetyltransferase, GNAT family protein, expressed -
15 Sobic.001G392700 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
16 Sobic.002G227000 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
17 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
18 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
19 Sobic.001G075201 - -
20 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein


Gene co-expression network
sample Sobic002G274700 Sobic002G274700 Sobic010G051800 Sobic010G051800 Sobic002G274700--Sobic010G051800 Sobic002G322400 Sobic002G322400 Sobic002G274700--Sobic002G322400 Sobic002G304500 Sobic002G304500 Sobic002G274700--Sobic002G304500 Sobic008G087200 Sobic008G087200 Sobic002G274700--Sobic008G087200 Sobic003G255700 Sobic003G255700 Sobic002G274700--Sobic003G255700 Sobic001G131900 Sobic001G131900 Sobic002G274700--Sobic001G131900 Sobic010G009600 Sobic010G009600 Sobic002G274700--Sobic010G009600 Sobic003G293400 Sobic003G293400 Sobic002G274700--Sobic003G293400 Sobic006G100266 Sobic006G100266 Sobic002G274700--Sobic006G100266 Sobic008G041300 Sobic008G041300 Sobic010G051800--Sobic008G041300 Sobic002G016000 Sobic002G016000 Sobic010G051800--Sobic002G016000 Sobic010G051800--Sobic002G274700 Sobic010G143633 Sobic010G143633 Sobic010G051800--Sobic010G143633 Sobic008G105600 Sobic008G105600 Sobic010G051800--Sobic008G105600 Sobic010G051800--Sobic003G255700 Sobic001G075201 Sobic001G075201 Sobic010G051800--Sobic001G075201 Sobic004G027200 Sobic004G027200 Sobic010G051800--Sobic004G027200 Sobic007G171700 Sobic007G171700 Sobic010G051800--Sobic007G171700 Sobic002G322400--Sobic002G274700 Sobic007G153500 Sobic007G153500 Sobic002G322400--Sobic007G153500 Sobic001G455000 Sobic001G455000 Sobic002G322400--Sobic001G455000 Sobic004G198300 Sobic004G198300 Sobic002G322400--Sobic004G198300 Sobic002G322400--Sobic006G100266 Sobic008G019532 Sobic008G019532 Sobic002G322400--Sobic008G019532 Sobic005G087300 Sobic005G087300 Sobic002G322400--Sobic005G087300 Sobic002G313100 Sobic002G313100 Sobic002G322400--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic002G322400--Sobic002G392400 Sobic004G064800 Sobic004G064800 Sobic002G304500--Sobic004G064800 Sobic005G201200 Sobic005G201200 Sobic002G304500--Sobic005G201200 Sobic008G007800 Sobic008G007800 Sobic002G304500--Sobic008G007800 Sobic010G255400 Sobic010G255400 Sobic002G304500--Sobic010G255400 Sobic002G304500--Sobic002G016000 Sobic006G199500 Sobic006G199500 Sobic002G304500--Sobic006G199500 Sobic004G328100 Sobic004G328100 Sobic002G304500--Sobic004G328100 Sobic008G007700 Sobic008G007700 Sobic002G304500--Sobic008G007700 Sobic004G038400 Sobic004G038400 Sobic002G304500--Sobic004G038400 Sobic008G087200--Sobic002G274700 Sobic008G087200--Sobic006G100266 Sobic008G087200--Sobic010G009600 Sobic001G534400 Sobic001G534400 Sobic008G087200--Sobic001G534400 Sobic010G038900 Sobic010G038900 Sobic008G087200--Sobic010G038900 Sobic006G272300 Sobic006G272300 Sobic008G087200--Sobic006G272300 Sobic006G184200 Sobic006G184200 Sobic008G087200--Sobic006G184200 Sobic010G018900 Sobic010G018900 Sobic008G087200--Sobic010G018900 Sobic003G343200 Sobic003G343200 Sobic008G087200--Sobic003G343200 Sobic003G255700--Sobic006G100266 Sobic003G308300 Sobic003G308300 Sobic003G255700--Sobic003G308300 Sobic009G186700 Sobic009G186700 Sobic003G255700--Sobic009G186700 Sobic002G066700 Sobic002G066700 Sobic003G255700--Sobic002G066700 Sobic001G305900 Sobic001G305900 Sobic003G255700--Sobic001G305900 Sobic008G013200 Sobic008G013200 Sobic003G255700--Sobic008G013200 Sobic003G255700--Sobic002G016000 Sobic001G050500 Sobic001G050500 Sobic003G255700--Sobic001G050500 Sobic003G255700--Sobic005G201200 Sobic001G131900--Sobic003G293400 Sobic003G352900 Sobic003G352900 Sobic001G131900--Sobic003G352900 Sobic001G131900--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G131900--Sobic001G076600 Sobic001G385300 Sobic001G385300 Sobic001G131900--Sobic001G385300 Sobic005G045800 Sobic005G045800 Sobic001G131900--Sobic005G045800 Sobic004G298600 Sobic004G298600 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic007G144100 Sobic007G144100 Sobic001G131900--Sobic007G144100 Sobic010G257500 Sobic010G257500 Sobic010G009600--Sobic010G257500 Sobic010G009600--Sobic002G274700 Sobic008G160600 Sobic008G160600 Sobic010G009600--Sobic008G160600 Sobic010G009600--Sobic001G534400 Sobic010G009600--Sobic008G087200 Sobic010G009600--Sobic006G100266 Sobic003G042200 Sobic003G042200 Sobic010G009600--Sobic003G042200 Sobic004G215200 Sobic004G215200 Sobic010G009600--Sobic004G215200 Sobic010G009600--Sobic006G184200 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100 Sobic006G100266--Sobic003G255700 Sobic006G100266--Sobic003G308300 Sobic006G100266--Sobic001G305900 Sobic006G100266--Sobic002G274700 Sobic003G270100 Sobic003G270100 Sobic006G100266--Sobic003G270100 Sobic006G100266--Sobic008G087200 Sobic006G100266--Sobic002G322400 Sobic006G100266--Sobic009G186700 Sobic006G100266--Sobic010G009600
Octagon: transcription factors


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