Gene annotation
Transcriptome id Sobic.008G087200.1,Sobic.008G087200.2
Synonym AGO6
Functional annotation argonaute, putative, expressed
UniProt A0A1B6PCC0
Pfam PF16487 PF16488 PF08699 PF16486 PF02170 PF02171
Panther DB PTHR22891 PTHR22891:SF35
NCBI CDD -
KEGG Orthology K11593; ELF2C, eukaryotic translation initiation factor 2C
Gene Ontology GO:0005515; protein binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G21150 : Argonaute family protein
RAP-DB (Rice) LOC_Os01g16870.3,LOC_Os01g16870.1 : argonaute, putative, expressed
MaizeGDB (Corn) Zm00025a046203
Brachypodium KQJ86941 , PNT62814
Barley HORVU0Hr1G012490.15 , HORVU0Hr1G012490.16 , HORVU0Hr1G012490.10 , HORVU0Hr1G012490.11 , HORVU0Hr1G012490.12 , HORVU0Hr1G012490.13 , HORVU0Hr1G012490.19 , HORVU0Hr1G012490.29 , HORVU0Hr1G012490.28 , HORVU0Hr1G012490.21 , HORVU0Hr1G012490.20 , HORVU0Hr1G012490.23 , HORVU0Hr1G012490.22 , HORVU0Hr1G012490.25 , HORVU0Hr1G012490.24 , HORVU0Hr1G012490.27 , HORVU0Hr1G012490.26 , HORVU0Hr1G012490.32 , HORVU0Hr1G012490.30 , HORVU0Hr1G012490.31 , HORVU0Hr1G012490.8 , HORVU0Hr1G012490.9 , HORVU0Hr1G012490.7 , HORVU0Hr1G012490.4 , HORVU0Hr1G012490.5 , HORVU0Hr1G012490.2 , HORVU0Hr1G012490.3 , HORVU0Hr1G012490.1 , HORVU0Hr1G012490.14
Wheat TraesCS5B02G162300 , TraesCS5A02G165900 , TraesCS5A02G165900 , TraesCS5D02G169500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.006G100266 - -
3 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -
4 Sobic.001G534400 - -
5 Sobic.010G038900 expressed protein -
6 Sobic.006G272300 pentatricopeptide, putative, expressed -
7 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
8 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
9 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
10 Sobic.008G160600 tesmin/TSO1-like CXC domain containing protein, expressed -
11 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
13 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
14 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
15 Sobic.010G257500 expressed protein -
16 Sobic.001G305900 GTP binding protein, putative, expressed -
17 Sobic.004G198300 expressed protein -
18 Sobic.001G534466 - -
19 Sobic.004G340100 PB1 domain containing protein, expressed -
20 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G087200 Sobic008G087200 Sobic002G274700 Sobic002G274700 Sobic008G087200--Sobic002G274700 Sobic006G100266 Sobic006G100266 Sobic008G087200--Sobic006G100266 Sobic010G009600 Sobic010G009600 Sobic008G087200--Sobic010G009600 Sobic001G534400 Sobic001G534400 Sobic008G087200--Sobic001G534400 Sobic010G038900 Sobic010G038900 Sobic008G087200--Sobic010G038900 Sobic006G272300 Sobic006G272300 Sobic008G087200--Sobic006G272300 Sobic006G184200 Sobic006G184200 Sobic008G087200--Sobic006G184200 Sobic010G018900 Sobic010G018900 Sobic008G087200--Sobic010G018900 Sobic003G343200 Sobic003G343200 Sobic008G087200--Sobic003G343200 Sobic010G051800 Sobic010G051800 Sobic002G274700--Sobic010G051800 Sobic002G322400 Sobic002G322400 Sobic002G274700--Sobic002G322400 Sobic002G304500 Sobic002G304500 Sobic002G274700--Sobic002G304500 Sobic002G274700--Sobic008G087200 Sobic003G255700 Sobic003G255700 Sobic002G274700--Sobic003G255700 Sobic001G131900 Sobic001G131900 Sobic002G274700--Sobic001G131900 Sobic002G274700--Sobic010G009600 Sobic003G293400 Sobic003G293400 Sobic002G274700--Sobic003G293400 Sobic002G274700--Sobic006G100266 Sobic006G100266--Sobic003G255700 Sobic003G308300 Sobic003G308300 Sobic006G100266--Sobic003G308300 Sobic001G305900 Sobic001G305900 Sobic006G100266--Sobic001G305900 Sobic006G100266--Sobic002G274700 Sobic003G270100 Sobic003G270100 Sobic006G100266--Sobic003G270100 Sobic006G100266--Sobic008G087200 Sobic006G100266--Sobic002G322400 Sobic009G186700 Sobic009G186700 Sobic006G100266--Sobic009G186700 Sobic006G100266--Sobic010G009600 Sobic010G257500 Sobic010G257500 Sobic010G009600--Sobic010G257500 Sobic010G009600--Sobic002G274700 Sobic008G160600 Sobic008G160600 Sobic010G009600--Sobic008G160600 Sobic010G009600--Sobic001G534400 Sobic010G009600--Sobic008G087200 Sobic010G009600--Sobic006G100266 Sobic003G042200 Sobic003G042200 Sobic010G009600--Sobic003G042200 Sobic004G215200 Sobic004G215200 Sobic010G009600--Sobic004G215200 Sobic010G009600--Sobic006G184200 Sobic001G534400--Sobic010G257500 Sobic001G534400--Sobic003G343200 Sobic001G534400--Sobic010G009600 Sobic001G534400--Sobic008G087200 Sobic004G014100 Sobic004G014100 Sobic001G534400--Sobic004G014100 Sobic005G160200 Sobic005G160200 Sobic001G534400--Sobic005G160200 Sobic001G534400--Sobic006G184200 Sobic008G174500 Sobic008G174500 Sobic001G534400--Sobic008G174500 Sobic002G271400 Sobic002G271400 Sobic001G534400--Sobic002G271400 Sobic010G038900--Sobic006G184200 Sobic002G066800 Sobic002G066800 Sobic010G038900--Sobic002G066800 Sobic004G350200 Sobic004G350200 Sobic010G038900--Sobic004G350200 Sobic010G038900--Sobic008G087200 Sobic010G038900--Sobic010G257500 Sobic010G038900--Sobic010G018900 Sobic010G038900--Sobic005G160200 Sobic004G063300 Sobic004G063300 Sobic010G038900--Sobic004G063300 Sobic010G038900--Sobic010G009600 Sobic006G272300--Sobic006G100266 Sobic006G272300--Sobic008G087200 Sobic006G272300--Sobic001G131900 Sobic001G196800 Sobic001G196800 Sobic006G272300--Sobic001G196800 Sobic006G272300--Sobic002G274700 Sobic006G272300--Sobic010G018900 Sobic006G272300--Sobic010G009600 Sobic006G272300--Sobic003G293400 Sobic001G188000 Sobic001G188000 Sobic006G272300--Sobic001G188000 Sobic006G184200--Sobic008G160600 Sobic006G184200--Sobic010G038900 Sobic002G354800 Sobic002G354800 Sobic006G184200--Sobic002G354800 Sobic006G184200--Sobic008G174500 Sobic006G184200--Sobic003G042200 Sobic002G230400 Sobic002G230400 Sobic006G184200--Sobic002G230400 Sobic006G184200--Sobic008G087200 Sobic006G184200--Sobic010G009600 Sobic003G379900 Sobic003G379900 Sobic006G184200--Sobic003G379900 Sobic002G308000 Sobic002G308000 Sobic010G018900--Sobic002G308000 Sobic010G018900--Sobic010G257500 Sobic004G007700 Sobic004G007700 Sobic010G018900--Sobic004G007700 Sobic010G018900--Sobic002G066800 Sobic010G018900--Sobic010G038900 Sobic010G018900--Sobic002G271400 Sobic010G269800 Sobic010G269800 Sobic010G018900--Sobic010G269800 Sobic009G063800 Sobic009G063800 Sobic010G018900--Sobic009G063800 Sobic010G018900--Sobic006G272300 Sobic010G222800 Sobic010G222800 Sobic003G343200--Sobic010G222800 Sobic003G343200--Sobic010G257500 Sobic003G343200--Sobic002G271400 Sobic003G343200--Sobic001G534400 Sobic003G411700 Sobic003G411700 Sobic003G343200--Sobic003G411700 Sobic003G343200--Sobic004G014100 Sobic003G289700 Sobic003G289700 Sobic003G343200--Sobic003G289700 Sobic004G306100 Sobic004G306100 Sobic003G343200--Sobic004G306100 Sobic010G024000 Sobic010G024000 Sobic003G343200--Sobic010G024000
Octagon: transcription factors


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