Gene annotation
Transcriptome id Sobic.010G038900.1
Synonym Sb10g003460
Functional annotation expressed protein
UniProt C5Z495
Pfam -
Panther DB PTHR36362
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16200 : -
RAP-DB (Rice) LOC_Os01g31220.1 : expressed protein
MaizeGDB (Corn) Zm00025a041517
Brachypodium PNT70568 , PNT70569 , KQK04460 , PNT70566 , PNT70567
Barley HORVU2Hr1G099320.2 , HORVU2Hr1G099320.1 , HORVU2Hr1G099250.1
Wheat TraesCS2B02G443600 , TraesCS2A02G424000 , TraesCS2D02G421800
Populus PNT55321


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
2 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
3 Sobic.004G350200 KH domain containing protein, putative, expressed K14944: RNA-binding protein Nova
4 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
5 Sobic.010G257500 expressed protein -
6 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
7 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
8 Sobic.004G063300 expressed protein -
9 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -
10 Sobic.009G069200 glycine-rich protein, putative, expressed -
11 Sobic.008G160600 tesmin/TSO1-like CXC domain containing protein, expressed -
12 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
13 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.001G154200 IQ calmodulin-binding motif domain containing protein, expressed -
15 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
16 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
17 Sobic.010G223500 dnaJ domain containing protein, expressed -
18 Sobic.009G120400 methyltransferase, putative, expressed -
19 Sobic.003G010900 expressed protein -
20 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G038900 Sobic010G038900 Sobic006G184200 Sobic006G184200 Sobic010G038900--Sobic006G184200 Sobic002G066800 Sobic002G066800 Sobic010G038900--Sobic002G066800 Sobic004G350200 Sobic004G350200 Sobic010G038900--Sobic004G350200 Sobic008G087200 Sobic008G087200 Sobic010G038900--Sobic008G087200 Sobic010G257500 Sobic010G257500 Sobic010G038900--Sobic010G257500 Sobic010G018900 Sobic010G018900 Sobic010G038900--Sobic010G018900 Sobic005G160200 Sobic005G160200 Sobic010G038900--Sobic005G160200 Sobic004G063300 Sobic004G063300 Sobic010G038900--Sobic004G063300 Sobic010G009600 Sobic010G009600 Sobic010G038900--Sobic010G009600 Sobic008G160600 Sobic008G160600 Sobic006G184200--Sobic008G160600 Sobic006G184200--Sobic010G038900 Sobic002G354800 Sobic002G354800 Sobic006G184200--Sobic002G354800 Sobic008G174500 Sobic008G174500 Sobic006G184200--Sobic008G174500 Sobic003G042200 Sobic003G042200 Sobic006G184200--Sobic003G042200 Sobic002G230400 Sobic002G230400 Sobic006G184200--Sobic002G230400 Sobic006G184200--Sobic008G087200 Sobic006G184200--Sobic010G009600 Sobic003G379900 Sobic003G379900 Sobic006G184200--Sobic003G379900 Sobic001G051400 Sobic001G051400 Sobic002G066800--Sobic001G051400 Sobic005G087300 Sobic005G087300 Sobic002G066800--Sobic005G087300 Sobic002G078100 Sobic002G078100 Sobic002G066800--Sobic002G078100 Sobic003G393200 Sobic003G393200 Sobic002G066800--Sobic003G393200 Sobic002G066800--Sobic010G038900 Sobic002G066800--Sobic010G018900 Sobic003G010900 Sobic003G010900 Sobic002G066800--Sobic003G010900 Sobic006G191200 Sobic006G191200 Sobic002G066800--Sobic006G191200 Sobic003G023200 Sobic003G023200 Sobic002G066800--Sobic003G023200 Sobic004G350200--Sobic010G038900 Sobic004G000400 Sobic004G000400 Sobic004G350200--Sobic004G000400 Sobic004G350200--Sobic005G160200 Sobic007G036800 Sobic007G036800 Sobic004G350200--Sobic007G036800 Sobic004G350200--Sobic004G063300 Sobic001G123600 Sobic001G123600 Sobic004G350200--Sobic001G123600 Sobic009G063800 Sobic009G063800 Sobic004G350200--Sobic009G063800 Sobic006G106600 Sobic006G106600 Sobic004G350200--Sobic006G106600 Sobic001G229300 Sobic001G229300 Sobic004G350200--Sobic001G229300 Sobic002G274700 Sobic002G274700 Sobic008G087200--Sobic002G274700 Sobic006G100266 Sobic006G100266 Sobic008G087200--Sobic006G100266 Sobic008G087200--Sobic010G009600 Sobic001G534400 Sobic001G534400 Sobic008G087200--Sobic001G534400 Sobic008G087200--Sobic010G038900 Sobic006G272300 Sobic006G272300 Sobic008G087200--Sobic006G272300 Sobic008G087200--Sobic006G184200 Sobic008G087200--Sobic010G018900 Sobic003G343200 Sobic003G343200 Sobic008G087200--Sobic003G343200 Sobic010G257500--Sobic010G009600 Sobic010G257500--Sobic003G343200 Sobic010G257500--Sobic001G534400 Sobic006G127200 Sobic006G127200 Sobic010G257500--Sobic006G127200 Sobic010G013400 Sobic010G013400 Sobic010G257500--Sobic010G013400 Sobic010G257500--Sobic010G018900 Sobic002G271400 Sobic002G271400 Sobic010G257500--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic010G257500--Sobic004G014100 Sobic010G257500--Sobic010G038900 Sobic002G308000 Sobic002G308000 Sobic010G018900--Sobic002G308000 Sobic010G018900--Sobic010G257500 Sobic004G007700 Sobic004G007700 Sobic010G018900--Sobic004G007700 Sobic010G018900--Sobic002G066800 Sobic010G018900--Sobic010G038900 Sobic010G018900--Sobic002G271400 Sobic010G269800 Sobic010G269800 Sobic010G018900--Sobic010G269800 Sobic010G018900--Sobic009G063800 Sobic010G018900--Sobic006G272300 Sobic005G160200--Sobic004G014100 Sobic003G411700 Sobic003G411700 Sobic005G160200--Sobic003G411700 Sobic005G160200--Sobic003G343200 Sobic006G091850 Sobic006G091850 Sobic005G160200--Sobic006G091850 Sobic002G315100 Sobic002G315100 Sobic005G160200--Sobic002G315100 Sobic005G160200--Sobic010G038900 Sobic005G160200--Sobic010G257500 Sobic005G160200--Sobic001G534400 Sobic005G160200--Sobic004G350200 Sobic004G063300--Sobic010G038900 Sobic009G008200 Sobic009G008200 Sobic004G063300--Sobic009G008200 Sobic004G063300--Sobic002G066800 Sobic004G063300--Sobic004G350200 Sobic002G141200 Sobic002G141200 Sobic004G063300--Sobic002G141200 Sobic007G034200 Sobic007G034200 Sobic004G063300--Sobic007G034200 Sobic002G322400 Sobic002G322400 Sobic004G063300--Sobic002G322400 Sobic004G063300--Sobic001G051400 Sobic004G063300--Sobic002G274700 Sobic010G009600--Sobic010G257500 Sobic010G009600--Sobic002G274700 Sobic010G009600--Sobic008G160600 Sobic010G009600--Sobic001G534400 Sobic010G009600--Sobic008G087200 Sobic010G009600--Sobic006G100266 Sobic010G009600--Sobic003G042200 Sobic004G215200 Sobic004G215200 Sobic010G009600--Sobic004G215200 Sobic010G009600--Sobic006G184200
Octagon: transcription factors


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