Gene annotation
Transcriptome id Sobic.003G343200.1
Synonym Sb03g038720
Functional annotation outer membrane protein, OMP85 family protein, expressed
UniProt C5XNY7
Pfam PF01103
Panther DB PTHR12815 PTHR12815:SF15
NCBI CDD KOG2602; Predicted cell surface protein homologous to bacterial outer membrane proteins
KEGG Orthology K07277; SAM50, TOB55, outer membrane protein insertion porin family
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05520 : Outer membrane OMP85 family protein
RAP-DB (Rice) LOC_Os05g39390.1 : outer membrane protein, OMP85 family protein, expressed
MaizeGDB (Corn) Zm00025a039734
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G222800 expressed protein -
2 Sobic.010G257500 expressed protein -
3 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
4 Sobic.001G534400 - -
5 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
6 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
7 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
8 Sobic.004G306100 expressed protein -
9 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
10 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
11 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
12 Sobic.003G007200 aquaporin protein, putative, expressed K09873: aquaporin TIP
13 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -
14 Sobic.003G013800 expressed protein -
15 Sobic.001G033300 expansin precursor, putative, expressed -
16 Sobic.002G123600 expressed protein -
17 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
18 Sobic.006G127200 kelch repeat protein, putative, expressed -
19 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -
20 Sobic.005G172700 expressed protein -


Gene co-expression network
sample Sobic003G343200 Sobic003G343200 Sobic010G222800 Sobic010G222800 Sobic003G343200--Sobic010G222800 Sobic010G257500 Sobic010G257500 Sobic003G343200--Sobic010G257500 Sobic002G271400 Sobic002G271400 Sobic003G343200--Sobic002G271400 Sobic001G534400 Sobic001G534400 Sobic003G343200--Sobic001G534400 Sobic003G411700 Sobic003G411700 Sobic003G343200--Sobic003G411700 Sobic004G014100 Sobic004G014100 Sobic003G343200--Sobic004G014100 Sobic003G289700 Sobic003G289700 Sobic003G343200--Sobic003G289700 Sobic004G306100 Sobic004G306100 Sobic003G343200--Sobic004G306100 Sobic010G024000 Sobic010G024000 Sobic003G343200--Sobic010G024000 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic010G009600 Sobic010G009600 Sobic010G257500--Sobic010G009600 Sobic010G257500--Sobic003G343200 Sobic010G257500--Sobic001G534400 Sobic006G127200 Sobic006G127200 Sobic010G257500--Sobic006G127200 Sobic010G013400 Sobic010G013400 Sobic010G257500--Sobic010G013400 Sobic010G018900 Sobic010G018900 Sobic010G257500--Sobic010G018900 Sobic010G257500--Sobic002G271400 Sobic010G257500--Sobic004G014100 Sobic010G038900 Sobic010G038900 Sobic010G257500--Sobic010G038900 Sobic002G271400--Sobic004G306100 Sobic002G271400--Sobic003G343200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic002G271400--Sobic010G024000 Sobic001G534400--Sobic010G257500 Sobic001G534400--Sobic003G343200 Sobic001G534400--Sobic010G009600 Sobic008G087200 Sobic008G087200 Sobic001G534400--Sobic008G087200 Sobic001G534400--Sobic004G014100 Sobic005G160200 Sobic005G160200 Sobic001G534400--Sobic005G160200 Sobic006G184200 Sobic006G184200 Sobic001G534400--Sobic006G184200 Sobic008G174500 Sobic008G174500 Sobic001G534400--Sobic008G174500 Sobic001G534400--Sobic002G271400 Sobic003G411700--Sobic010G222800 Sobic003G411700--Sobic004G306100 Sobic003G411700--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G411700--Sobic003G343200 Sobic001G212600 Sobic001G212600 Sobic003G411700--Sobic001G212600 Sobic003G411700--Sobic010G024000 Sobic003G411700--Sobic005G160200 Sobic002G343000 Sobic002G343000 Sobic004G014100--Sobic002G343000 Sobic006G200901 Sobic006G200901 Sobic004G014100--Sobic006G200901 Sobic004G014100--Sobic005G160200 Sobic006G143300 Sobic006G143300 Sobic004G014100--Sobic006G143300 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic006G140300 Sobic006G140300 Sobic004G014100--Sobic006G140300 Sobic005G172700 Sobic005G172700 Sobic003G289700--Sobic005G172700 Sobic003G289700--Sobic003G343200 Sobic003G289700--Sobic010G222800 Sobic010G237800 Sobic010G237800 Sobic003G289700--Sobic010G237800 Sobic003G320100 Sobic003G320100 Sobic003G289700--Sobic003G320100 Sobic006G106200 Sobic006G106200 Sobic003G289700--Sobic006G106200 Sobic009G138300 Sobic009G138300 Sobic003G289700--Sobic009G138300 Sobic010G243100 Sobic010G243100 Sobic003G289700--Sobic010G243100 Sobic003G289700--Sobic005G160200 Sobic004G306100--Sobic002G271400 Sobic004G306100--Sobic010G103500 Sobic004G306100--Sobic003G411700 Sobic003G315700 Sobic003G315700 Sobic004G306100--Sobic003G315700 Sobic004G306100--Sobic006G127200 Sobic003G409600 Sobic003G409600 Sobic004G306100--Sobic003G409600 Sobic002G260700 Sobic002G260700 Sobic004G306100--Sobic002G260700 Sobic002G123600 Sobic002G123600 Sobic004G306100--Sobic002G123600 Sobic010G052400 Sobic010G052400 Sobic004G306100--Sobic010G052400 Sobic010G024000--Sobic010G222800 Sobic010G024000--Sobic008G131900 Sobic010G024000--Sobic007G076200 Sobic010G024000--Sobic003G411700 Sobic010G024000--Sobic002G271400 Sobic002G173400 Sobic002G173400 Sobic010G024000--Sobic002G173400 Sobic006G193100 Sobic006G193100 Sobic010G024000--Sobic006G193100 Sobic010G024000--Sobic003G343200 Sobic002G052800 Sobic002G052800 Sobic010G024000--Sobic002G052800
Octagon: transcription factors


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