Gene annotation
Transcriptome id Sobic.002G060400.2
Synonym Sb02g005040
Functional annotation OsFBX237 - F-box domain containing protein, expressed
UniProt A0A1W0W2I2
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g35050.1 : OsFBX237 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
2 Sobic.004G064800 haemolysin-III, putative, expressed K07297: adiponectin receptor
3 Sobic.005G201200 - -
4 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
5 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
6 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
7 Sobic.007G060100 expressed protein -
8 Sobic.002G015700 OsFBD13 - F-box and FBD domain containing protein, expressed -
9 Sobic.002G158300 ankyrin, putative, expressed -
10 Sobic.008G007800 - -
11 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
12 Sobic.002G060200 OsFBX238 - F-box domain containing protein, expressed -
13 Sobic.005G063200 expressed protein -
14 Sobic.010G198400 expressed protein -
15 Sobic.010G027100 expressed protein -
16 Sobic.006G199500 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
17 Sobic.008G007700 expressed protein -
18 Sobic.003G211800 expressed protein -
19 Sobic.009G048700 expressed protein -
20 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8


Gene co-expression network
sample Sobic002G060400 Sobic002G060400 Sobic002G304500 Sobic002G304500 Sobic002G060400--Sobic002G304500 Sobic004G064800 Sobic004G064800 Sobic002G060400--Sobic004G064800 Sobic005G201200 Sobic005G201200 Sobic002G060400--Sobic005G201200 Sobic010G255400 Sobic010G255400 Sobic002G060400--Sobic010G255400 Sobic008G041300 Sobic008G041300 Sobic002G060400--Sobic008G041300 Sobic001G076600 Sobic001G076600 Sobic002G060400--Sobic001G076600 Sobic007G060100 Sobic007G060100 Sobic002G060400--Sobic007G060100 Sobic002G015700 Sobic002G015700 Sobic002G060400--Sobic002G015700 Sobic002G158300 Sobic002G158300 Sobic002G060400--Sobic002G158300 Sobic002G304500--Sobic004G064800 Sobic002G304500--Sobic005G201200 Sobic008G007800 Sobic008G007800 Sobic002G304500--Sobic008G007800 Sobic002G304500--Sobic010G255400 Sobic002G016000 Sobic002G016000 Sobic002G304500--Sobic002G016000 Sobic006G199500 Sobic006G199500 Sobic002G304500--Sobic006G199500 Sobic004G328100 Sobic004G328100 Sobic002G304500--Sobic004G328100 Sobic008G007700 Sobic008G007700 Sobic002G304500--Sobic008G007700 Sobic004G038400 Sobic004G038400 Sobic002G304500--Sobic004G038400 Sobic004G064800--Sobic008G007800 Sobic004G064800--Sobic002G304500 Sobic004G064800--Sobic005G201200 Sobic004G064800--Sobic010G255400 Sobic004G064800--Sobic006G199500 Sobic009G048700 Sobic009G048700 Sobic004G064800--Sobic009G048700 Sobic004G064800--Sobic008G007700 Sobic004G064800--Sobic002G016000 Sobic009G006700 Sobic009G006700 Sobic004G064800--Sobic009G006700 Sobic005G201200--Sobic002G016000 Sobic005G201200--Sobic008G007800 Sobic006G038700 Sobic006G038700 Sobic005G201200--Sobic006G038700 Sobic005G201200--Sobic004G064800 Sobic005G201200--Sobic009G006700 Sobic005G201200--Sobic010G255400 Sobic002G066700 Sobic002G066700 Sobic005G201200--Sobic002G066700 Sobic005G201200--Sobic002G304500 Sobic002G147400 Sobic002G147400 Sobic005G201200--Sobic002G147400 Sobic010G255400--Sobic008G007800 Sobic010G255400--Sobic004G064800 Sobic010G255400--Sobic005G201200 Sobic010G255400--Sobic002G016000 Sobic010G255400--Sobic008G041300 Sobic010G255400--Sobic002G304500 Sobic010G255400--Sobic001G076600 Sobic010G255400--Sobic002G158300 Sobic010G255400--Sobic006G199500 Sobic008G041300--Sobic002G016000 Sobic008G041300--Sobic005G201200 Sobic008G041300--Sobic010G255400 Sobic008G041300--Sobic008G007800 Sobic006G254400 Sobic006G254400 Sobic008G041300--Sobic006G254400 Sobic001G117701 Sobic001G117701 Sobic008G041300--Sobic001G117701 Sobic001G075201 Sobic001G075201 Sobic008G041300--Sobic001G075201 Sobic010G038000 Sobic010G038000 Sobic008G041300--Sobic010G038000 Sobic009G002100 Sobic009G002100 Sobic008G041300--Sobic009G002100 Sobic003G352900 Sobic003G352900 Sobic001G076600--Sobic003G352900 Sobic007G144100 Sobic007G144100 Sobic001G076600--Sobic007G144100 Sobic008G166100 Sobic008G166100 Sobic001G076600--Sobic008G166100 Sobic001G076600--Sobic004G038400 Sobic002G299500 Sobic002G299500 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic003G376900 Sobic003G376900 Sobic001G076600--Sobic003G376900 Sobic010G263400 Sobic010G263400 Sobic007G060100--Sobic010G263400 Sobic004G168900 Sobic004G168900 Sobic007G060100--Sobic004G168900 Sobic007G060100--Sobic004G038400 Sobic001G506400 Sobic001G506400 Sobic007G060100--Sobic001G506400 Sobic007G060100--Sobic007G144100 Sobic007G060100--Sobic003G258100 Sobic007G048900 Sobic007G048900 Sobic007G060100--Sobic007G048900 Sobic007G060100--Sobic001G076600 Sobic001G218600 Sobic001G218600 Sobic007G060100--Sobic001G218600 Sobic002G243400 Sobic002G243400 Sobic002G015700--Sobic002G243400 Sobic003G211800 Sobic003G211800 Sobic002G015700--Sobic003G211800 Sobic002G097200 Sobic002G097200 Sobic002G015700--Sobic002G097200 Sobic002G015700--Sobic004G168900 Sobic002G015700--Sobic009G048700 Sobic002G015700--Sobic006G199500 Sobic001G504800 Sobic001G504800 Sobic002G015700--Sobic001G504800 Sobic002G015700--Sobic004G064800 Sobic009G145000 Sobic009G145000 Sobic002G015700--Sobic009G145000 Sobic002G158300--Sobic002G016000 Sobic002G158300--Sobic010G255400 Sobic002G158300--Sobic002G015700 Sobic002G158300--Sobic002G304500 Sobic002G158300--Sobic008G041300 Sobic002G158300--Sobic005G201200 Sobic002G158300--Sobic003G211800 Sobic002G158300--Sobic004G064800 Sobic006G013600 Sobic006G013600 Sobic002G158300--Sobic006G013600
Octagon: transcription factors


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