Gene annotation
Transcriptome id Sobic.010G198400.1
Synonym
Functional annotation expressed protein
UniProt A0A194YKB2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g01940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G198400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G424200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
2 Sobic.010G038000 ATP-binding region, ATPase-like domain containing protein, expressed -
3 Sobic.006G254400 expressed protein -
4 Sobic.009G006700 vacuolar ATP synthase, putative, expressed K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
5 Sobic.009G048700 expressed protein -
6 Sobic.004G020200 expressed protein -
7 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
8 Sobic.006G199500 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
9 Sobic.009G008000 transcription factor Dp, putative, expressed -
10 Sobic.007G219601 - -
11 Sobic.008G155700 ankyrin repeat domain-containing protein 44, putative, expressed -
12 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
13 Sobic.007G094700 - -
14 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
15 Sobic.005G144500 glycosyltransferase, putative, expressed -
16 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
17 Sobic.006G038700 - -
18 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
19 Sobic.004G203150 - -
20 Sobic.003G211800 expressed protein -


Gene co-expression network
sample Sobic010G198400 Sobic010G198400 Sobic002G424200 Sobic002G424200 Sobic010G198400--Sobic002G424200 Sobic010G038000 Sobic010G038000 Sobic010G198400--Sobic010G038000 Sobic006G254400 Sobic006G254400 Sobic010G198400--Sobic006G254400 Sobic009G006700 Sobic009G006700 Sobic010G198400--Sobic009G006700 Sobic009G048700 Sobic009G048700 Sobic010G198400--Sobic009G048700 Sobic004G020200 Sobic004G020200 Sobic010G198400--Sobic004G020200 Sobic002G243400 Sobic002G243400 Sobic010G198400--Sobic002G243400 Sobic006G199500 Sobic006G199500 Sobic010G198400--Sobic006G199500 Sobic009G008000 Sobic009G008000 Sobic010G198400--Sobic009G008000 Sobic002G424200--Sobic010G198400 Sobic002G424200--Sobic009G008000 Sobic007G219601 Sobic007G219601 Sobic002G424200--Sobic007G219601 Sobic008G155700 Sobic008G155700 Sobic002G424200--Sobic008G155700 Sobic002G424200--Sobic009G006700 Sobic002G424200--Sobic004G020200 Sobic007G094700 Sobic007G094700 Sobic002G424200--Sobic007G094700 Sobic004G203150 Sobic004G203150 Sobic002G424200--Sobic004G203150 Sobic002G424200--Sobic006G254400 Sobic010G038000--Sobic009G006700 Sobic010G038000--Sobic009G048700 Sobic010G038000--Sobic007G219601 Sobic010G038000--Sobic010G198400 Sobic001G417700 Sobic001G417700 Sobic010G038000--Sobic001G417700 Sobic010G038000--Sobic004G020200 Sobic010G038000--Sobic007G094700 Sobic010G038000--Sobic002G243400 Sobic010G038000--Sobic008G155700 Sobic006G254400--Sobic004G020200 Sobic006G254400--Sobic010G198400 Sobic006G254400--Sobic002G424200 Sobic006G254400--Sobic001G417700 Sobic006G254400--Sobic010G038000 Sobic002G418300 Sobic002G418300 Sobic006G254400--Sobic002G418300 Sobic006G254400--Sobic009G048700 Sobic005G144500 Sobic005G144500 Sobic006G254400--Sobic005G144500 Sobic003G211800 Sobic003G211800 Sobic006G254400--Sobic003G211800 Sobic009G006700--Sobic007G219601 Sobic009G006700--Sobic007G094700 Sobic009G006700--Sobic004G203150 Sobic009G006700--Sobic009G048700 Sobic009G006700--Sobic009G008000 Sobic009G006700--Sobic005G144500 Sobic009G006700--Sobic008G155700 Sobic006G038700 Sobic006G038700 Sobic009G006700--Sobic006G038700 Sobic009G006700--Sobic010G038000 Sobic009G048700--Sobic009G008000 Sobic009G048700--Sobic001G417700 Sobic009G048700--Sobic008G155700 Sobic009G145000 Sobic009G145000 Sobic009G048700--Sobic009G145000 Sobic009G048700--Sobic007G094700 Sobic009G048700--Sobic006G199500 Sobic009G048700--Sobic004G203150 Sobic009G048700--Sobic002G418300 Sobic009G048700--Sobic007G219601 Sobic004G020200--Sobic001G417700 Sobic004G020200--Sobic009G008000 Sobic004G020200--Sobic007G094700 Sobic004G020200--Sobic009G048700 Sobic004G020200--Sobic007G219601 Sobic001G136000 Sobic001G136000 Sobic004G020200--Sobic001G136000 Sobic004G020200--Sobic008G155700 Sobic004G020200--Sobic002G418300 Sobic004G020200--Sobic009G145000 Sobic002G243400--Sobic009G145000 Sobic002G243400--Sobic001G417700 Sobic002G243400--Sobic009G048700 Sobic002G189500 Sobic002G189500 Sobic002G243400--Sobic002G189500 Sobic010G061600 Sobic010G061600 Sobic002G243400--Sobic010G061600 Sobic002G243400--Sobic009G008000 Sobic009G002100 Sobic009G002100 Sobic002G243400--Sobic009G002100 Sobic002G243400--Sobic002G418300 Sobic004G190400 Sobic004G190400 Sobic002G243400--Sobic004G190400 Sobic006G199500--Sobic009G048700 Sobic006G199500--Sobic009G008000 Sobic002G097200 Sobic002G097200 Sobic006G199500--Sobic002G097200 Sobic006G199500--Sobic001G417700 Sobic006G199500--Sobic009G145000 Sobic006G199500--Sobic002G243400 Sobic006G199500--Sobic004G020200 Sobic006G199500--Sobic001G136000 Sobic006G199500--Sobic008G155700 Sobic009G008000--Sobic009G048700 Sobic009G008000--Sobic007G094700 Sobic009G008000--Sobic004G203150 Sobic009G008000--Sobic001G417700 Sobic009G008000--Sobic009G145000 Sobic009G008000--Sobic007G219601 Sobic009G008000--Sobic008G155700 Sobic009G008000--Sobic002G418300 Sobic009G008000--Sobic002G189500
Octagon: transcription factors


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