Gene annotation
Transcriptome id Sobic.008G174500.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PER4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14020 : nuclear factor Y, subunit A6
RAP-DB (Rice) LOC_Os12g42400.1 : nuclear transcription factor Y subunit, putative, expressed
MaizeGDB (Corn) Zm00025a004726
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -
2 Sobic.003G062101 - -
3 Sobic.001G194100 DEFL6 - Defensin and Defensin-like DEFL family, expressed -
4 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
5 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -
6 Sobic.009G156200 starch binding domain containing protein, putative, expressed -
7 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
8 Sobic.010G223500 dnaJ domain containing protein, expressed -
9 Sobic.006G100266 - -
10 Sobic.010G257500 expressed protein -
11 Sobic.010G013400 exosome complex exonuclease rrp4, putative, expressed -
12 Sobic.001G534400 - -
13 Sobic.004G262100 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
14 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
15 Sobic.002G354800 zinc finger family protein, putative, expressed -
16 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
17 Sobic.009G234500 similar to Cold acclimation protein COR413-TM1(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cold acclimation protein WCOR413, putative, expressed -
18 Sobic.002G221100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G160600 tesmin/TSO1-like CXC domain containing protein, expressed -
20 Sobic.003G379900 plus-3 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G174500 Sobic008G174500 Sobic003G042200 Sobic003G042200 Sobic008G174500--Sobic003G042200 Sobic003G062101 Sobic003G062101 Sobic008G174500--Sobic003G062101 Sobic001G194100 Sobic001G194100 Sobic008G174500--Sobic001G194100 Sobic006G184200 Sobic006G184200 Sobic008G174500--Sobic006G184200 Sobic010G009600 Sobic010G009600 Sobic008G174500--Sobic010G009600 Sobic009G156200 Sobic009G156200 Sobic008G174500--Sobic009G156200 Sobic004G014100 Sobic004G014100 Sobic008G174500--Sobic004G014100 Sobic010G223500 Sobic010G223500 Sobic008G174500--Sobic010G223500 Sobic006G100266 Sobic006G100266 Sobic008G174500--Sobic006G100266 Sobic003G042200--Sobic008G174500 Sobic003G042200--Sobic001G194100 Sobic003G042200--Sobic003G062101 Sobic003G042200--Sobic009G156200 Sobic003G042200--Sobic006G184200 Sobic003G379900 Sobic003G379900 Sobic003G042200--Sobic003G379900 Sobic003G042200--Sobic010G009600 Sobic002G349000 Sobic002G349000 Sobic003G042200--Sobic002G349000 Sobic002G238800 Sobic002G238800 Sobic003G042200--Sobic002G238800 Sobic003G062101--Sobic008G174500 Sobic003G062101--Sobic001G194100 Sobic003G062101--Sobic003G042200 Sobic004G262100 Sobic004G262100 Sobic003G062101--Sobic004G262100 Sobic004G065800 Sobic004G065800 Sobic003G062101--Sobic004G065800 Sobic003G062101--Sobic009G156200 Sobic003G062101--Sobic010G223500 Sobic004G339900 Sobic004G339900 Sobic003G062101--Sobic004G339900 Sobic004G071050 Sobic004G071050 Sobic003G062101--Sobic004G071050 Sobic001G194100--Sobic003G062101 Sobic004G163700 Sobic004G163700 Sobic001G194100--Sobic004G163700 Sobic001G194100--Sobic003G042200 Sobic001G194100--Sobic004G065800 Sobic001G194100--Sobic008G174500 Sobic001G194100--Sobic004G262100 Sobic001G194100--Sobic004G339900 Sobic002G420400 Sobic002G420400 Sobic001G194100--Sobic002G420400 Sobic002G354800 Sobic002G354800 Sobic001G194100--Sobic002G354800 Sobic008G160600 Sobic008G160600 Sobic006G184200--Sobic008G160600 Sobic010G038900 Sobic010G038900 Sobic006G184200--Sobic010G038900 Sobic006G184200--Sobic002G354800 Sobic006G184200--Sobic008G174500 Sobic006G184200--Sobic003G042200 Sobic002G230400 Sobic002G230400 Sobic006G184200--Sobic002G230400 Sobic008G087200 Sobic008G087200 Sobic006G184200--Sobic008G087200 Sobic006G184200--Sobic010G009600 Sobic006G184200--Sobic003G379900 Sobic010G257500 Sobic010G257500 Sobic010G009600--Sobic010G257500 Sobic002G274700 Sobic002G274700 Sobic010G009600--Sobic002G274700 Sobic010G009600--Sobic008G160600 Sobic001G534400 Sobic001G534400 Sobic010G009600--Sobic001G534400 Sobic010G009600--Sobic008G087200 Sobic010G009600--Sobic006G100266 Sobic010G009600--Sobic003G042200 Sobic004G215200 Sobic004G215200 Sobic010G009600--Sobic004G215200 Sobic010G009600--Sobic006G184200 Sobic009G156200--Sobic004G262100 Sobic001G053700 Sobic001G053700 Sobic009G156200--Sobic001G053700 Sobic009G156200--Sobic002G349000 Sobic002G360900 Sobic002G360900 Sobic009G156200--Sobic002G360900 Sobic009G156200--Sobic003G042200 Sobic004G340566 Sobic004G340566 Sobic009G156200--Sobic004G340566 Sobic002G381750 Sobic002G381750 Sobic009G156200--Sobic002G381750 Sobic009G234500 Sobic009G234500 Sobic009G156200--Sobic009G234500 Sobic009G156200--Sobic003G062101 Sobic002G343000 Sobic002G343000 Sobic004G014100--Sobic002G343000 Sobic006G200901 Sobic006G200901 Sobic004G014100--Sobic006G200901 Sobic005G160200 Sobic005G160200 Sobic004G014100--Sobic005G160200 Sobic006G143300 Sobic006G143300 Sobic004G014100--Sobic006G143300 Sobic003G343200 Sobic003G343200 Sobic004G014100--Sobic003G343200 Sobic004G014100--Sobic002G349000 Sobic004G014100--Sobic002G230400 Sobic004G014100--Sobic002G354800 Sobic006G140300 Sobic006G140300 Sobic004G014100--Sobic006G140300 Sobic010G223500--Sobic008G160600 Sobic010G223500--Sobic003G062101 Sobic010G223500--Sobic006G184200 Sobic010G223500--Sobic006G100266 Sobic010G223500--Sobic003G042200 Sobic010G223500--Sobic008G174500 Sobic010G223500--Sobic010G009600 Sobic010G223500--Sobic001G194100 Sobic010G223500--Sobic010G038900 Sobic003G255700 Sobic003G255700 Sobic006G100266--Sobic003G255700 Sobic003G308300 Sobic003G308300 Sobic006G100266--Sobic003G308300 Sobic001G305900 Sobic001G305900 Sobic006G100266--Sobic001G305900 Sobic006G100266--Sobic002G274700 Sobic003G270100 Sobic003G270100 Sobic006G100266--Sobic003G270100 Sobic006G100266--Sobic008G087200 Sobic002G322400 Sobic002G322400 Sobic006G100266--Sobic002G322400 Sobic009G186700 Sobic009G186700 Sobic006G100266--Sobic009G186700 Sobic006G100266--Sobic010G009600
Octagon: transcription factors


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