Gene annotation
Transcriptome id Sobic.003G379900.3,Sobic.003G379900.1,Sobic.003G379900.2
Synonym Sb03g041950
Functional annotation plus-3 domain containing protein, putative, expressed
UniProt A0A1W0W0U1 , A0A1B6Q7F3 , A0A1B6Q7C9
Pfam PF02201 PF02213 PF03126
Panther DB PTHR14445 PTHR14445:SF39
NCBI CDD KOG1946; RNA polymerase I transcription factor UAF
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G08430 : nucleic acid binding;zinc ion binding;DNA binding,SWIB/MDM2 domain;Plus-3;GYF
RAP-DB (Rice) LOC_Os01g66140.1 : plus-3 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a026541
Brachypodium KQK10927 , KQK10929 , KQK10928 , KQK10930 , KQK10931 , KQK10932 , PNT73336 , PNT73337 , PNT73335
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi
2 Sobic.002G420400 - -
3 Sobic.005G034200 OsFBX114 - F-box domain containing protein, expressed -
4 Sobic.010G087100 MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed K10738: DNA helicase MCM9
5 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -
6 Sobic.004G339900 expressed protein -
7 Sobic.001G081800 GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
8 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
9 Sobic.005G036200 protein of unknown function containing protein, expressed -
10 Sobic.001G375800 expressed protein -
11 Sobic.006G081700 - -
12 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
13 Sobic.001G194100 DEFL6 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.002G286632 - -
15 Sobic.009G178500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL67 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.002G354800 zinc finger family protein, putative, expressed -
17 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
18 Sobic.009G168200 expressed protein -
19 Sobic.001G456400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein of unknown function DUF1675 domain containing protein, expressed -
20 Sobic.010G257500 expressed protein -


Gene co-expression network
sample Sobic003G379900 Sobic003G379900 Sobic002G238800 Sobic002G238800 Sobic003G379900--Sobic002G238800 Sobic002G420400 Sobic002G420400 Sobic003G379900--Sobic002G420400 Sobic005G034200 Sobic005G034200 Sobic003G379900--Sobic005G034200 Sobic010G087100 Sobic010G087100 Sobic003G379900--Sobic010G087100 Sobic003G042200 Sobic003G042200 Sobic003G379900--Sobic003G042200 Sobic004G339900 Sobic004G339900 Sobic003G379900--Sobic004G339900 Sobic001G081800 Sobic001G081800 Sobic003G379900--Sobic001G081800 Sobic006G184200 Sobic006G184200 Sobic003G379900--Sobic006G184200 Sobic005G036200 Sobic005G036200 Sobic003G379900--Sobic005G036200 Sobic002G238800--Sobic003G379900 Sobic002G238800--Sobic001G081800 Sobic005G172700 Sobic005G172700 Sobic002G238800--Sobic005G172700 Sobic001G506300 Sobic001G506300 Sobic002G238800--Sobic001G506300 Sobic002G238800--Sobic003G042200 Sobic002G238800--Sobic010G087100 Sobic004G218000 Sobic004G218000 Sobic002G238800--Sobic004G218000 Sobic002G354800 Sobic002G354800 Sobic002G238800--Sobic002G354800 Sobic002G349000 Sobic002G349000 Sobic002G238800--Sobic002G349000 Sobic002G420400--Sobic004G339900 Sobic004G071050 Sobic004G071050 Sobic002G420400--Sobic004G071050 Sobic002G420400--Sobic005G036200 Sobic004G242200 Sobic004G242200 Sobic002G420400--Sobic004G242200 Sobic001G485200 Sobic001G485200 Sobic002G420400--Sobic001G485200 Sobic002G420400--Sobic003G379900 Sobic001G375800 Sobic001G375800 Sobic002G420400--Sobic001G375800 Sobic010G152000 Sobic010G152000 Sobic002G420400--Sobic010G152000 Sobic001G194100 Sobic001G194100 Sobic002G420400--Sobic001G194100 Sobic002G286632 Sobic002G286632 Sobic005G034200--Sobic002G286632 Sobic005G034200--Sobic003G379900 Sobic006G081700 Sobic006G081700 Sobic005G034200--Sobic006G081700 Sobic009G168200 Sobic009G168200 Sobic005G034200--Sobic009G168200 Sobic009G178500 Sobic009G178500 Sobic005G034200--Sobic009G178500 Sobic005G034200--Sobic010G087100 Sobic005G034200--Sobic002G238800 Sobic003G326500 Sobic003G326500 Sobic005G034200--Sobic003G326500 Sobic003G423800 Sobic003G423800 Sobic005G034200--Sobic003G423800 Sobic002G095300 Sobic002G095300 Sobic010G087100--Sobic002G095300 Sobic010G087100--Sobic003G379900 Sobic010G087100--Sobic001G506300 Sobic002G131100 Sobic002G131100 Sobic010G087100--Sobic002G131100 Sobic008G090400 Sobic008G090400 Sobic010G087100--Sobic008G090400 Sobic008G118100 Sobic008G118100 Sobic010G087100--Sobic008G118100 Sobic010G087100--Sobic002G238800 Sobic008G160600 Sobic008G160600 Sobic010G087100--Sobic008G160600 Sobic009G002200 Sobic009G002200 Sobic010G087100--Sobic009G002200 Sobic008G174500 Sobic008G174500 Sobic003G042200--Sobic008G174500 Sobic003G042200--Sobic001G194100 Sobic003G062101 Sobic003G062101 Sobic003G042200--Sobic003G062101 Sobic009G156200 Sobic009G156200 Sobic003G042200--Sobic009G156200 Sobic003G042200--Sobic006G184200 Sobic003G042200--Sobic003G379900 Sobic010G009600 Sobic010G009600 Sobic003G042200--Sobic010G009600 Sobic003G042200--Sobic002G349000 Sobic003G042200--Sobic002G238800 Sobic004G339900--Sobic002G420400 Sobic004G339900--Sobic004G071050 Sobic004G339900--Sobic001G485200 Sobic004G339900--Sobic001G194100 Sobic004G339900--Sobic010G152000 Sobic007G041200 Sobic007G041200 Sobic004G339900--Sobic007G041200 Sobic008G116100 Sobic008G116100 Sobic004G339900--Sobic008G116100 Sobic004G065800 Sobic004G065800 Sobic004G339900--Sobic004G065800 Sobic004G163700 Sobic004G163700 Sobic004G339900--Sobic004G163700 Sobic001G081800--Sobic002G238800 Sobic006G143300 Sobic006G143300 Sobic001G081800--Sobic006G143300 Sobic002G335500 Sobic002G335500 Sobic001G081800--Sobic002G335500 Sobic001G081800--Sobic002G354800 Sobic005G164800 Sobic005G164800 Sobic001G081800--Sobic005G164800 Sobic002G343000 Sobic002G343000 Sobic001G081800--Sobic002G343000 Sobic001G171100 Sobic001G171100 Sobic001G081800--Sobic001G171100 Sobic005G033700 Sobic005G033700 Sobic001G081800--Sobic005G033700 Sobic001G081800--Sobic003G379900 Sobic006G184200--Sobic008G160600 Sobic010G038900 Sobic010G038900 Sobic006G184200--Sobic010G038900 Sobic006G184200--Sobic002G354800 Sobic006G184200--Sobic008G174500 Sobic006G184200--Sobic003G042200 Sobic002G230400 Sobic002G230400 Sobic006G184200--Sobic002G230400 Sobic008G087200 Sobic008G087200 Sobic006G184200--Sobic008G087200 Sobic006G184200--Sobic010G009600 Sobic006G184200--Sobic003G379900 Sobic007G192200 Sobic007G192200 Sobic005G036200--Sobic007G192200 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500
Octagon: transcription factors


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