Gene annotation
Transcriptome id Sobic.002G420400.3,Sobic.002G420400.2,Sobic.002G420400.1
Synonym
Functional annotation -
UniProt A0A1B6QGB1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G339900 expressed protein -
2 Sobic.004G071050 - -
3 Sobic.005G036200 protein of unknown function containing protein, expressed -
4 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
5 Sobic.001G485200 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
6 Sobic.003G379900 plus-3 domain containing protein, putative, expressed -
7 Sobic.001G375800 expressed protein -
8 Sobic.010G152000 powdery mildew resistant protein 5, putative, expressed -
9 Sobic.001G194100 DEFL6 - Defensin and Defensin-like DEFL family, expressed -
10 Sobic.001G456400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein of unknown function DUF1675 domain containing protein, expressed -
11 Sobic.004G065800 - -
12 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.006G107900 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.001G081800 GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
15 Sobic.002G104300 FAS1, putative, expressed K10750: chromatin assembly factor 1 subunit A
16 Sobic.007G041200 cytochrome P450, putative, expressed -
17 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
18 Sobic.001G425900 EDM2, putative, expressed -
19 Sobic.010G195450 - -
20 Sobic.002G354800 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic002G420400 Sobic002G420400 Sobic004G339900 Sobic004G339900 Sobic002G420400--Sobic004G339900 Sobic004G071050 Sobic004G071050 Sobic002G420400--Sobic004G071050 Sobic005G036200 Sobic005G036200 Sobic002G420400--Sobic005G036200 Sobic004G242200 Sobic004G242200 Sobic002G420400--Sobic004G242200 Sobic001G485200 Sobic001G485200 Sobic002G420400--Sobic001G485200 Sobic003G379900 Sobic003G379900 Sobic002G420400--Sobic003G379900 Sobic001G375800 Sobic001G375800 Sobic002G420400--Sobic001G375800 Sobic010G152000 Sobic010G152000 Sobic002G420400--Sobic010G152000 Sobic001G194100 Sobic001G194100 Sobic002G420400--Sobic001G194100 Sobic004G339900--Sobic002G420400 Sobic004G339900--Sobic004G071050 Sobic004G339900--Sobic001G485200 Sobic004G339900--Sobic001G194100 Sobic004G339900--Sobic010G152000 Sobic007G041200 Sobic007G041200 Sobic004G339900--Sobic007G041200 Sobic008G116100 Sobic008G116100 Sobic004G339900--Sobic008G116100 Sobic004G065800 Sobic004G065800 Sobic004G339900--Sobic004G065800 Sobic004G163700 Sobic004G163700 Sobic004G339900--Sobic004G163700 Sobic004G071050--Sobic001G485200 Sobic010G106601 Sobic010G106601 Sobic004G071050--Sobic010G106601 Sobic004G071050--Sobic002G420400 Sobic004G071050--Sobic004G339900 Sobic009G033500 Sobic009G033500 Sobic004G071050--Sobic009G033500 Sobic009G253800 Sobic009G253800 Sobic004G071050--Sobic009G253800 Sobic004G071050--Sobic004G065800 Sobic006G107900 Sobic006G107900 Sobic004G071050--Sobic006G107900 Sobic007G091200 Sobic007G091200 Sobic004G071050--Sobic007G091200 Sobic007G192200 Sobic007G192200 Sobic005G036200--Sobic007G192200 Sobic005G036200--Sobic002G420400 Sobic009G002200 Sobic009G002200 Sobic005G036200--Sobic009G002200 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic004G242200--Sobic002G420400 Sobic004G242200--Sobic001G456400 Sobic004G242200--Sobic005G036200 Sobic004G242200--Sobic009G002200 Sobic004G242200--Sobic001G375800 Sobic004G242200--Sobic007G192200 Sobic004G242200--Sobic004G339900 Sobic004G242200--Sobic010G152000 Sobic004G242200--Sobic004G071050 Sobic001G485200--Sobic006G107900 Sobic003G400400 Sobic003G400400 Sobic001G485200--Sobic003G400400 Sobic001G485200--Sobic004G071050 Sobic002G391100 Sobic002G391100 Sobic001G485200--Sobic002G391100 Sobic001G017500 Sobic001G017500 Sobic001G485200--Sobic001G017500 Sobic001G485200--Sobic004G339900 Sobic001G485200--Sobic010G106601 Sobic001G485200--Sobic002G420400 Sobic002G302300 Sobic002G302300 Sobic001G485200--Sobic002G302300 Sobic002G238800 Sobic002G238800 Sobic003G379900--Sobic002G238800 Sobic003G379900--Sobic002G420400 Sobic005G034200 Sobic005G034200 Sobic003G379900--Sobic005G034200 Sobic010G087100 Sobic010G087100 Sobic003G379900--Sobic010G087100 Sobic003G042200 Sobic003G042200 Sobic003G379900--Sobic003G042200 Sobic003G379900--Sobic004G339900 Sobic001G081800 Sobic001G081800 Sobic003G379900--Sobic001G081800 Sobic006G184200 Sobic006G184200 Sobic003G379900--Sobic006G184200 Sobic003G379900--Sobic005G036200 Sobic001G375800--Sobic005G036200 Sobic001G375800--Sobic001G456400 Sobic001G375800--Sobic009G002200 Sobic001G375800--Sobic002G420400 Sobic010G033500 Sobic010G033500 Sobic001G375800--Sobic010G033500 Sobic001G375800--Sobic004G242200 Sobic001G375800--Sobic003G379900 Sobic001G375800--Sobic001G485200 Sobic001G375800--Sobic004G339900 Sobic010G152000--Sobic004G339900 Sobic010G152000--Sobic002G420400 Sobic010G152000--Sobic004G071050 Sobic010G152000--Sobic005G036200 Sobic010G152000--Sobic001G456400 Sobic010G152000--Sobic004G242200 Sobic010G152000--Sobic001G485200 Sobic003G071901 Sobic003G071901 Sobic010G152000--Sobic003G071901 Sobic010G152000--Sobic004G065800 Sobic003G062101 Sobic003G062101 Sobic001G194100--Sobic003G062101 Sobic001G194100--Sobic004G163700 Sobic001G194100--Sobic003G042200 Sobic001G194100--Sobic004G065800 Sobic008G174500 Sobic008G174500 Sobic001G194100--Sobic008G174500 Sobic004G262100 Sobic004G262100 Sobic001G194100--Sobic004G262100 Sobic001G194100--Sobic004G339900 Sobic001G194100--Sobic002G420400 Sobic002G354800 Sobic002G354800 Sobic001G194100--Sobic002G354800
Octagon: transcription factors


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