Gene annotation
Transcriptome id Sobic.004G215200.2,Sobic.004G215200.1
Synonym Sb04g026040
Functional annotation expressed protein
UniProt A0A1Z5RNH8 , C5XXN7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g40420.1 : expressed protein
MaizeGDB (Corn) Zm00025a021163
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G053350 - -
2 Sobic.010G062900 expressed protein -
3 Sobic.006G208200 GHMP kinases ATP-binding protein, putative, expressed K18677: galacturonokinase
4 Sobic.001G485500 - -
5 Sobic.001G499500 la domain containing protein, putative, expressed K18757: la-related protein 1
6 Sobic.009G163400 growth regulator related protein, putative, expressed -
7 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
8 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
9 Sobic.010G252100 PPR repeat domain containing protein, putative, expressed -
10 Sobic.001G485700 DAG protein, chloroplast precursor, putative, expressed -
11 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
12 Sobic.003G418400 expressed protein -
13 Sobic.004G198300 expressed protein -
14 Sobic.009G168200 expressed protein -
15 Sobic.008G121501 - -
16 Sobic.008G141900 ZOS12-07 - C2H2 zinc finger protein, expressed -
17 Sobic.001G010500 frigida, putative, expressed -
18 Sobic.003G275400 B3 DNA binding domain containing protein, expressed -
19 Sobic.009G178500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL67 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.001G130600 galactosyltransferase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G215200 Sobic004G215200 Sobic001G053350 Sobic001G053350 Sobic004G215200--Sobic001G053350 Sobic010G062900 Sobic010G062900 Sobic004G215200--Sobic010G062900 Sobic006G208200 Sobic006G208200 Sobic004G215200--Sobic006G208200 Sobic001G485500 Sobic001G485500 Sobic004G215200--Sobic001G485500 Sobic001G499500 Sobic001G499500 Sobic004G215200--Sobic001G499500 Sobic009G163400 Sobic009G163400 Sobic004G215200--Sobic009G163400 Sobic002G309100 Sobic002G309100 Sobic004G215200--Sobic002G309100 Sobic007G086600 Sobic007G086600 Sobic004G215200--Sobic007G086600 Sobic010G252100 Sobic010G252100 Sobic004G215200--Sobic010G252100 Sobic001G053350--Sobic001G485500 Sobic001G053350--Sobic004G215200 Sobic010G255400 Sobic010G255400 Sobic001G053350--Sobic010G255400 Sobic005G201200 Sobic005G201200 Sobic001G053350--Sobic005G201200 Sobic008G121501 Sobic008G121501 Sobic001G053350--Sobic008G121501 Sobic008G007800 Sobic008G007800 Sobic001G053350--Sobic008G007800 Sobic001G075200 Sobic001G075200 Sobic001G053350--Sobic001G075200 Sobic009G050800 Sobic009G050800 Sobic001G053350--Sobic009G050800 Sobic010G036901 Sobic010G036901 Sobic001G053350--Sobic010G036901 Sobic010G062900--Sobic002G309100 Sobic003G009000 Sobic003G009000 Sobic010G062900--Sobic003G009000 Sobic009G098700 Sobic009G098700 Sobic010G062900--Sobic009G098700 Sobic010G073900 Sobic010G073900 Sobic010G062900--Sobic010G073900 Sobic001G485700 Sobic001G485700 Sobic010G062900--Sobic001G485700 Sobic001G183666 Sobic001G183666 Sobic010G062900--Sobic001G183666 Sobic006G239500 Sobic006G239500 Sobic010G062900--Sobic006G239500 Sobic001G130600 Sobic001G130600 Sobic010G062900--Sobic001G130600 Sobic010G005100 Sobic010G005100 Sobic010G062900--Sobic010G005100 Sobic006G208200--Sobic004G215200 Sobic001G203800 Sobic001G203800 Sobic006G208200--Sobic001G203800 Sobic006G208200--Sobic001G499500 Sobic003G418400 Sobic003G418400 Sobic006G208200--Sobic003G418400 Sobic003G270100 Sobic003G270100 Sobic006G208200--Sobic003G270100 Sobic002G037600 Sobic002G037600 Sobic006G208200--Sobic002G037600 Sobic004G328100 Sobic004G328100 Sobic006G208200--Sobic004G328100 Sobic006G208200--Sobic010G062900 Sobic010G009600 Sobic010G009600 Sobic006G208200--Sobic010G009600 Sobic001G485500--Sobic001G053350 Sobic001G485500--Sobic004G215200 Sobic003G275400 Sobic003G275400 Sobic001G485500--Sobic003G275400 Sobic001G485500--Sobic010G255400 Sobic001G485500--Sobic010G036901 Sobic009G168200 Sobic009G168200 Sobic001G485500--Sobic009G168200 Sobic001G485500--Sobic005G201200 Sobic001G485500--Sobic009G163400 Sobic001G485500--Sobic010G062900 Sobic001G499500--Sobic010G062900 Sobic006G050100 Sobic006G050100 Sobic001G499500--Sobic006G050100 Sobic001G499500--Sobic004G215200 Sobic008G141100 Sobic008G141100 Sobic001G499500--Sobic008G141100 Sobic002G383700 Sobic002G383700 Sobic001G499500--Sobic002G383700 Sobic001G499500--Sobic007G086600 Sobic003G022000 Sobic003G022000 Sobic001G499500--Sobic003G022000 Sobic001G499500--Sobic001G053350 Sobic001G499500--Sobic010G255400 Sobic001G376501 Sobic001G376501 Sobic009G163400--Sobic001G376501 Sobic008G141900 Sobic008G141900 Sobic009G163400--Sobic008G141900 Sobic001G010500 Sobic001G010500 Sobic009G163400--Sobic001G010500 Sobic009G163400--Sobic008G121501 Sobic009G163400--Sobic002G309100 Sobic002G064800 Sobic002G064800 Sobic009G163400--Sobic002G064800 Sobic001G257650 Sobic001G257650 Sobic009G163400--Sobic001G257650 Sobic009G163400--Sobic003G275400 Sobic009G163400--Sobic009G168200 Sobic002G309100--Sobic010G062900 Sobic002G309100--Sobic003G009000 Sobic002G309100--Sobic001G010500 Sobic002G309100--Sobic009G163400 Sobic002G309100--Sobic009G098700 Sobic002G309100--Sobic001G485700 Sobic002G309100--Sobic001G257650 Sobic002G309100--Sobic008G121501 Sobic002G309100--Sobic001G130600 Sobic003G004800 Sobic003G004800 Sobic007G086600--Sobic003G004800 Sobic001G117900 Sobic001G117900 Sobic007G086600--Sobic001G117900 Sobic005G048600 Sobic005G048600 Sobic007G086600--Sobic005G048600 Sobic003G293400 Sobic003G293400 Sobic007G086600--Sobic003G293400 Sobic007G086600--Sobic003G022000 Sobic002G348400 Sobic002G348400 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic002G193500 Sobic002G193500 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000 Sobic010G252100--Sobic001G485700 Sobic010G252100--Sobic001G130600 Sobic010G166800 Sobic010G166800 Sobic010G252100--Sobic010G166800 Sobic006G114100 Sobic006G114100 Sobic010G252100--Sobic006G114100 Sobic009G005200 Sobic009G005200 Sobic010G252100--Sobic009G005200 Sobic003G217800 Sobic003G217800 Sobic010G252100--Sobic003G217800 Sobic010G252100--Sobic003G009000 Sobic006G077050 Sobic006G077050 Sobic010G252100--Sobic006G077050 Sobic010G252100--Sobic002G309100
Octagon: transcription factors


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