Gene annotation
Transcriptome id Sobic.009G124000.1
Synonym MEP, Sb09g019180
Functional annotation mesophyll envelope protein (PubMedID : 26976818)
expressed protein
UniProt C5YXG7
Pfam PF11891
Panther DB PTHR31620 PTHR31620:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12470 : Protein of unknown function (DUF3411)
RAP-DB (Rice) LOC_Os05g32230.1 : expressed protein
MaizeGDB (Corn) Zm00025a043539
Brachypodium KQK06555 , PNT71395
Barley HORVU3Hr1G109880.4 , HORVU3Hr1G109880.1 , HORVU3Hr1G109880.2
Wheat -
Populus -


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cDNA sequences
Sobic.009G124000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
2 Sobic.008G183700 cbbY protein-related, putative, expressed -
3 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
4 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
5 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
6 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
7 Sobic.003G292300 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
8 Sobic.002G244500 ATP phosphoribosyltransferase, putative, expressed K00765: ATP phosphoribosyltransferase
9 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
10 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
11 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
12 Sobic.004G301200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
13 Sobic.003G381900 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed K00991: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
14 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
15 Sobic.008G090900 expressed protein -
16 Sobic.008G038600 pyridoxal-dependent decarboxylase protein, putative, expressed K01586: diaminopimelate decarboxylase
17 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
18 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
19 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
20 Sobic.008G118600 riboflavin synthase alpha chain, putative, expressed K00793: ribE, riboflavin synthase


Gene co-expression network
sample Sobic009G124000 Sobic009G124000 Sobic001G486700 Sobic001G486700 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic004G275600 Sobic004G275600 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic001G486700--Sobic009G124000 Sobic001G462200 Sobic001G462200 Sobic001G486700--Sobic001G462200 Sobic004G018000 Sobic004G018000 Sobic001G486700--Sobic004G018000 Sobic003G378400 Sobic003G378400 Sobic001G486700--Sobic003G378400 Sobic002G301200 Sobic002G301200 Sobic001G486700--Sobic002G301200 Sobic001G486700--Sobic004G275600 Sobic001G468600 Sobic001G468600 Sobic001G486700--Sobic001G468600 Sobic009G072000 Sobic009G072000 Sobic001G486700--Sobic009G072000 Sobic009G045900 Sobic009G045900 Sobic001G486700--Sobic009G045900 Sobic004G040900 Sobic004G040900 Sobic008G183700--Sobic004G040900 Sobic008G183700--Sobic009G124000 Sobic003G083400 Sobic003G083400 Sobic008G183700--Sobic003G083400 Sobic008G067100 Sobic008G067100 Sobic008G183700--Sobic008G067100 Sobic001G402500 Sobic001G402500 Sobic008G183700--Sobic001G402500 Sobic005G231100 Sobic005G231100 Sobic008G183700--Sobic005G231100 Sobic008G183700--Sobic001G401700 Sobic004G055500 Sobic004G055500 Sobic008G183700--Sobic004G055500 Sobic003G128400 Sobic003G128400 Sobic008G183700--Sobic003G128400 Sobic004G296800 Sobic004G296800 Sobic001G376700--Sobic004G296800 Sobic006G084500 Sobic006G084500 Sobic001G376700--Sobic006G084500 Sobic004G044200 Sobic004G044200 Sobic001G376700--Sobic004G044200 Sobic001G376700--Sobic009G124000 Sobic003G420900 Sobic003G420900 Sobic001G376700--Sobic003G420900 Sobic001G376700--Sobic003G292300 Sobic009G180800 Sobic009G180800 Sobic001G376700--Sobic009G180800 Sobic008G123600 Sobic008G123600 Sobic001G376700--Sobic008G123600 Sobic009G001500 Sobic009G001500 Sobic001G376700--Sobic009G001500 Sobic003G309300 Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic001G537500 Sobic001G537500 Sobic004G275600--Sobic001G537500 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic004G275600--Sobic003G420900 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic001G433100 Sobic001G433100 Sobic001G401700--Sobic001G433100 Sobic006G088000 Sobic006G088000 Sobic001G401700--Sobic006G088000 Sobic002G343400 Sobic002G343400 Sobic001G401700--Sobic002G343400 Sobic004G359100 Sobic004G359100 Sobic001G401700--Sobic004G359100 Sobic008G090900 Sobic008G090900 Sobic001G401700--Sobic008G090900 Sobic001G382800 Sobic001G382800 Sobic001G401700--Sobic001G382800 Sobic006G217000 Sobic006G217000 Sobic001G401700--Sobic006G217000 Sobic004G003900 Sobic004G003900 Sobic001G401700--Sobic004G003900 Sobic001G120500 Sobic001G120500 Sobic001G401700--Sobic001G120500 Sobic001G531400 Sobic001G531400 Sobic007G208300--Sobic001G531400 Sobic001G291900 Sobic001G291900 Sobic007G208300--Sobic001G291900 Sobic003G085000 Sobic003G085000 Sobic007G208300--Sobic003G085000 Sobic004G336000 Sobic004G336000 Sobic007G208300--Sobic004G336000 Sobic004G301200 Sobic004G301200 Sobic007G208300--Sobic004G301200 Sobic001G295300 Sobic001G295300 Sobic007G208300--Sobic001G295300 Sobic001G104800 Sobic001G104800 Sobic007G208300--Sobic001G104800 Sobic006G132000 Sobic006G132000 Sobic007G208300--Sobic006G132000 Sobic007G208300--Sobic004G055500 Sobic005G110481 Sobic005G110481 Sobic003G292300--Sobic005G110481 Sobic001G069500 Sobic001G069500 Sobic003G292300--Sobic001G069500 Sobic010G011200 Sobic010G011200 Sobic003G292300--Sobic010G011200 Sobic007G090537 Sobic007G090537 Sobic003G292300--Sobic007G090537 Sobic003G292300--Sobic009G001500 Sobic003G295800 Sobic003G295800 Sobic003G292300--Sobic003G295800 Sobic003G225100 Sobic003G225100 Sobic003G292300--Sobic003G225100 Sobic003G383600 Sobic003G383600 Sobic003G292300--Sobic003G383600 Sobic007G013400 Sobic007G013400 Sobic003G292300--Sobic007G013400 Sobic002G244500--Sobic009G124000 Sobic006G275800 Sobic006G275800 Sobic002G244500--Sobic006G275800 Sobic002G244500--Sobic008G067100 Sobic002G244500--Sobic010G221600 Sobic003G265500 Sobic003G265500 Sobic002G244500--Sobic003G265500 Sobic002G244500--Sobic004G275600 Sobic004G144400 Sobic004G144400 Sobic002G244500--Sobic004G144400 Sobic002G244500--Sobic003G420900 Sobic002G333100 Sobic002G333100 Sobic002G244500--Sobic002G333100 Sobic010G221600--Sobic003G265500 Sobic001G543700 Sobic001G543700 Sobic010G221600--Sobic001G543700 Sobic010G221600--Sobic008G090900 Sobic004G214400 Sobic004G214400 Sobic010G221600--Sobic004G214400 Sobic010G221600--Sobic004G003900 Sobic001G478600 Sobic001G478600 Sobic010G221600--Sobic001G478600 Sobic002G189600 Sobic002G189600 Sobic010G221600--Sobic002G189600 Sobic004G208600 Sobic004G208600 Sobic010G221600--Sobic004G208600 Sobic010G221600--Sobic003G292300
Octagon: transcription factors


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