Gene annotation
Transcriptome id Sobic.002G244500.3,Sobic.002G244500.1,Sobic.002G244500.2
Synonym ATP-PRT2, Sb02g028140, HISN1B, ATATP-PRT2
Functional annotation ATP phosphoribosyltransferase, putative, expressed
UniProt A0A1B6QD92 , A0A1B6QDA1 , A0A1B6QDB0
Pfam PF01634 PF08029 PF01634
Panther DB PTHR21403 PTHR21403:SF0
NCBI CDD KOG2831; ATP phosphoribosyltransferase
KEGG Orthology K00765; ATP phosphoribosyltransferase
Gene Ontology GO:0005737; cytoplasm GO:0003879ATP phosphoribosyltransferase activity GO:0000105histidine biosynthetic process GO:0005737cytoplasm GO:0003879ATP phosphoribosyltransferase activity GO:0000287magnesium ion binding GO:0000105histidine biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G09795 : ATP phosphoribosyl transferase 2
RAP-DB (Rice) LOC_Os03g04169.1 : ATP phosphoribosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a047423
Brachypodium KQK23787 , KQK23788
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
2 Sobic.006G275800 dehydrogenase, putative, expressed K00052: leuB, 3-isopropylmalate dehydrogenase
3 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
4 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
5 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
6 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
7 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
8 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
9 Sobic.002G333100 transmembrane protein, putative, expressed -
10 Sobic.008G038600 pyridoxal-dependent decarboxylase protein, putative, expressed K01586: diaminopimelate decarboxylase
11 Sobic.002G378000 amidase family protein, putative, expressed -
12 Sobic.004G019500 pentatricopeptide, putative, expressed -
13 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
14 Sobic.009G214200 phosphoribosylamine--glycine ligase, putative, expressed K01945: phosphoribosylamine---glycine ligase
15 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
16 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
17 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
18 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
19 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
20 Sobic.009G085200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase


Gene co-expression network
sample Sobic002G244500 Sobic002G244500 Sobic009G124000 Sobic009G124000 Sobic002G244500--Sobic009G124000 Sobic006G275800 Sobic006G275800 Sobic002G244500--Sobic006G275800 Sobic008G067100 Sobic008G067100 Sobic002G244500--Sobic008G067100 Sobic010G221600 Sobic010G221600 Sobic002G244500--Sobic010G221600 Sobic003G265500 Sobic003G265500 Sobic002G244500--Sobic003G265500 Sobic004G275600 Sobic004G275600 Sobic002G244500--Sobic004G275600 Sobic004G144400 Sobic004G144400 Sobic002G244500--Sobic004G144400 Sobic003G420900 Sobic003G420900 Sobic002G244500--Sobic003G420900 Sobic002G333100 Sobic002G333100 Sobic002G244500--Sobic002G333100 Sobic001G486700 Sobic001G486700 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic009G124000--Sobic002G244500 Sobic009G124000--Sobic010G221600 Sobic006G275800--Sobic002G244500 Sobic009G130500 Sobic009G130500 Sobic006G275800--Sobic009G130500 Sobic010G216300 Sobic010G216300 Sobic006G275800--Sobic010G216300 Sobic001G178400 Sobic001G178400 Sobic006G275800--Sobic001G178400 Sobic001G416700 Sobic001G416700 Sobic006G275800--Sobic001G416700 Sobic006G275800--Sobic009G124000 Sobic006G258000 Sobic006G258000 Sobic006G275800--Sobic006G258000 Sobic004G214400 Sobic004G214400 Sobic006G275800--Sobic004G214400 Sobic001G456800 Sobic001G456800 Sobic006G275800--Sobic001G456800 Sobic008G090900 Sobic008G090900 Sobic008G067100--Sobic008G090900 Sobic007G095500 Sobic007G095500 Sobic008G067100--Sobic007G095500 Sobic008G067100--Sobic004G144400 Sobic002G156100 Sobic002G156100 Sobic008G067100--Sobic002G156100 Sobic001G382800 Sobic001G382800 Sobic008G067100--Sobic001G382800 Sobic004G003900 Sobic004G003900 Sobic008G067100--Sobic004G003900 Sobic003G128400 Sobic003G128400 Sobic008G067100--Sobic003G128400 Sobic004G208600 Sobic004G208600 Sobic008G067100--Sobic004G208600 Sobic002G378000 Sobic002G378000 Sobic008G067100--Sobic002G378000 Sobic010G221600--Sobic003G265500 Sobic001G543700 Sobic001G543700 Sobic010G221600--Sobic001G543700 Sobic010G221600--Sobic008G090900 Sobic010G221600--Sobic004G214400 Sobic010G221600--Sobic004G003900 Sobic001G478600 Sobic001G478600 Sobic010G221600--Sobic001G478600 Sobic002G189600 Sobic002G189600 Sobic010G221600--Sobic002G189600 Sobic010G221600--Sobic004G208600 Sobic010G221600--Sobic003G292300 Sobic003G225100 Sobic003G225100 Sobic003G265500--Sobic003G225100 Sobic005G184300 Sobic005G184300 Sobic003G265500--Sobic005G184300 Sobic003G085000 Sobic003G085000 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic004G065300 Sobic004G065300 Sobic003G265500--Sobic004G065300 Sobic002G353300 Sobic002G353300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic003G309300 Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic001G537500 Sobic001G537500 Sobic004G275600--Sobic001G537500 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic004G275600--Sobic003G420900 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic004G019500 Sobic004G019500 Sobic004G144400--Sobic004G019500 Sobic004G144400--Sobic008G067100 Sobic004G144400--Sobic008G090900 Sobic004G144400--Sobic004G003900 Sobic002G181132 Sobic002G181132 Sobic004G144400--Sobic002G181132 Sobic004G301200 Sobic004G301200 Sobic004G144400--Sobic004G301200 Sobic009G092900 Sobic009G092900 Sobic004G144400--Sobic009G092900 Sobic002G218500 Sobic002G218500 Sobic004G144400--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic004G144400--Sobic009G129100 Sobic003G420900--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic003G420900--Sobic004G296800 Sobic003G165800 Sobic003G165800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic003G420900--Sobic002G333100 Sobic003G420900--Sobic004G275600 Sobic010G134500 Sobic010G134500 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic003G420900--Sobic001G543700 Sobic002G333100--Sobic003G420900 Sobic010G108900 Sobic010G108900 Sobic002G333100--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic002G333100--Sobic006G168400 Sobic002G333100--Sobic002G244500 Sobic002G333100--Sobic001G376700 Sobic002G333100--Sobic004G296800 Sobic002G333100--Sobic003G265500 Sobic002G333100--Sobic009G124000 Sobic001G463500 Sobic001G463500 Sobic002G333100--Sobic001G463500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.