Gene annotation
Transcriptome id Sobic.004G275600.1
Synonym Sb04g031260
Functional annotation hydrolase, putative, expressed
UniProt C5Y0S1
Pfam PF07687 PF01546
Panther DB PTHR11014 PTHR11014:SF109
NCBI CDD KOG2276; Metalloexopeptidases
KEGG Orthology K01438; acetylornithine deacetylase
Gene Ontology GO:0016787; hydrolase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G17830 : Peptidase M20/M25/M40 family protein
RAP-DB (Rice) LOC_Os02g46520.1 : hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a021599
Brachypodium KQK00837
Barley HORVU6Hr1G066930.12 , HORVU6Hr1G066930.16 , HORVU6Hr1G066930.17 , HORVU6Hr1G066930.14 , HORVU6Hr1G066930.18 , HORVU6Hr1G066930.19 , HORVU6Hr1G066930.8 , HORVU6Hr1G066930.9 , HORVU6Hr1G066930.1 , HORVU6Hr1G066930.2 , HORVU6Hr1G066930.3 , HORVU6Hr1G066930.4 , HORVU6Hr1G066930.5 , HORVU6Hr1G066930.6 , HORVU6Hr1G066930.7 , HORVU6Hr1G066920.2 , HORVU6Hr1G066920.1 , HORVU6Hr1G066930.13 , HORVU6Hr1G066930.10 , HORVU6Hr1G066930.11 , HORVU6Hr1G066930.15 , HORVU6Hr1G066930.21 , HORVU6Hr1G066930.20
Wheat TraesCS6A02G263900 , TraesCS6B02G290900 , TraesCS6D02G251000
Populus -


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cDNA sequences
Sobic.004G275600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
2 Sobic.003G165101 - K12876: RBM8A, RNA-binding protein 8A
3 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
4 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
5 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
6 Sobic.007G071900 GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
7 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
8 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
9 Sobic.004G257100 transmembrane 9 superfamily member, putative, expressed -
10 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
11 Sobic.004G283600 O-acyltransferase, putative, expressed K13519: LPT1, lysophospholipid acyltransferase
12 Sobic.006G035500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
13 Sobic.010G179700 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
14 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
15 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
16 Sobic.006G157000 adenylosuccinate lyase, putative, expressed K01756: purB, adenylosuccinate lyase
17 Sobic.005G018800 expressed protein -
18 Sobic.001G004200 uncharacterized protein yeiN, putative, expressed K16329: pseudouridylate synthase
19 Sobic.003G167900 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
20 Sobic.002G393700 expressed protein -


Gene co-expression network
sample Sobic004G275600 Sobic004G275600 Sobic003G309300 Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic001G537500 Sobic001G537500 Sobic004G275600--Sobic001G537500 Sobic009G124000 Sobic009G124000 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic003G420900 Sobic003G420900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic003G309300--Sobic004G275600 Sobic006G157000 Sobic006G157000 Sobic003G309300--Sobic006G157000 Sobic003G309300--Sobic003G165101 Sobic003G309300--Sobic007G071900 Sobic008G038600 Sobic008G038600 Sobic003G309300--Sobic008G038600 Sobic006G237000 Sobic006G237000 Sobic003G309300--Sobic006G237000 Sobic003G309300--Sobic009G124000 Sobic003G309300--Sobic001G537500 Sobic010G216300 Sobic010G216300 Sobic003G309300--Sobic010G216300 Sobic003G165101--Sobic004G275600 Sobic010G179700 Sobic010G179700 Sobic003G165101--Sobic010G179700 Sobic004G283600 Sobic004G283600 Sobic003G165101--Sobic004G283600 Sobic006G010400 Sobic006G010400 Sobic003G165101--Sobic006G010400 Sobic001G428800 Sobic001G428800 Sobic003G165101--Sobic001G428800 Sobic007G161200 Sobic007G161200 Sobic003G165101--Sobic007G161200 Sobic003G165101--Sobic006G237000 Sobic003G165101--Sobic003G309300 Sobic005G163700 Sobic005G163700 Sobic003G165101--Sobic005G163700 Sobic001G537500--Sobic006G073200 Sobic004G167200 Sobic004G167200 Sobic001G537500--Sobic004G167200 Sobic006G002800 Sobic006G002800 Sobic001G537500--Sobic006G002800 Sobic001G537500--Sobic004G275600 Sobic001G537500--Sobic004G257100 Sobic007G145400 Sobic007G145400 Sobic001G537500--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G537500--Sobic005G115500 Sobic001G178300 Sobic001G178300 Sobic001G537500--Sobic001G178300 Sobic002G246700 Sobic002G246700 Sobic001G537500--Sobic002G246700 Sobic001G486700 Sobic001G486700 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic008G157200 Sobic008G157200 Sobic006G073200--Sobic008G157200 Sobic006G073200--Sobic004G257100 Sobic001G431000 Sobic001G431000 Sobic006G073200--Sobic001G431000 Sobic006G073200--Sobic001G537500 Sobic001G493200 Sobic001G493200 Sobic006G073200--Sobic001G493200 Sobic008G135200 Sobic008G135200 Sobic006G073200--Sobic008G135200 Sobic006G036100 Sobic006G036100 Sobic006G073200--Sobic006G036100 Sobic004G131300 Sobic004G131300 Sobic006G073200--Sobic004G131300 Sobic001G251100 Sobic001G251100 Sobic006G073200--Sobic001G251100 Sobic002G231500 Sobic002G231500 Sobic007G071900--Sobic002G231500 Sobic009G075800 Sobic009G075800 Sobic007G071900--Sobic009G075800 Sobic001G434200 Sobic001G434200 Sobic007G071900--Sobic001G434200 Sobic001G455800 Sobic001G455800 Sobic007G071900--Sobic001G455800 Sobic002G020700 Sobic002G020700 Sobic007G071900--Sobic002G020700 Sobic007G071900--Sobic004G257100 Sobic001G333100 Sobic001G333100 Sobic007G071900--Sobic001G333100 Sobic003G221400 Sobic003G221400 Sobic007G071900--Sobic003G221400 Sobic003G375200 Sobic003G375200 Sobic007G071900--Sobic003G375200 Sobic003G420900--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic003G420900--Sobic004G296800 Sobic003G165800 Sobic003G165800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic002G333100 Sobic002G333100 Sobic003G420900--Sobic002G333100 Sobic003G420900--Sobic004G275600 Sobic010G134500 Sobic010G134500 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic001G543700 Sobic001G543700 Sobic003G420900--Sobic001G543700 Sobic008G090900 Sobic008G090900 Sobic008G067100--Sobic008G090900 Sobic007G095500 Sobic007G095500 Sobic008G067100--Sobic007G095500 Sobic004G144400 Sobic004G144400 Sobic008G067100--Sobic004G144400 Sobic002G156100 Sobic002G156100 Sobic008G067100--Sobic002G156100 Sobic001G382800 Sobic001G382800 Sobic008G067100--Sobic001G382800 Sobic004G003900 Sobic004G003900 Sobic008G067100--Sobic004G003900 Sobic003G128400 Sobic003G128400 Sobic008G067100--Sobic003G128400 Sobic004G208600 Sobic004G208600 Sobic008G067100--Sobic004G208600 Sobic002G378000 Sobic002G378000 Sobic008G067100--Sobic002G378000 Sobic004G257100--Sobic004G131300 Sobic004G257100--Sobic001G251100 Sobic004G092500 Sobic004G092500 Sobic004G257100--Sobic004G092500 Sobic004G257100--Sobic006G073200 Sobic005G172500 Sobic005G172500 Sobic004G257100--Sobic005G172500 Sobic008G004600 Sobic008G004600 Sobic004G257100--Sobic008G004600 Sobic001G227400 Sobic001G227400 Sobic004G257100--Sobic001G227400 Sobic008G112800 Sobic008G112800 Sobic004G257100--Sobic008G112800 Sobic001G392300 Sobic001G392300 Sobic004G257100--Sobic001G392300
Octagon: transcription factors


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