Gene annotation
Transcriptome id Sobic.002G378000.1
Synonym Sb02g039510, AMI1, ATTOC64-I, ATAMI1, TOC64-I
Functional annotation amidase family protein, putative, expressed
UniProt C5X2G1
Pfam PF01425
Panther DB PTHR11895 PTHR11895:SF39
NCBI CDD KOG1211; Amidases
KEGG Orthology -
Gene Ontology GO:0016884; carbon-nitrogen ligase activity, with glutamine as amido-N-donor


Orthologs (automatic annotation)
TAIR AT1G08980 : amidase 1
RAP-DB (Rice) LOC_Os04g02780.1 : amidase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a015230 , Zm00025a023022
Brachypodium KQJ85501
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
2 Sobic.010G086900 OsFBX187 - F-box domain containing protein, expressed -
3 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
4 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.009G104700 prenyltransferase, putative, expressed K04040: chlG, chlorophyll/bacteriochlorophyll a synthase
6 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.007G101300 expressed protein -
8 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
9 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
10 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
11 Sobic.004G214400 tic20, putative, expressed -
12 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
13 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
14 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
15 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
16 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.005G110481 - -
18 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
19 Sobic.010G215600 prenyltransferase, putative, expressed K09833: HPT, HGGT, homogentisate phytyltransferase / homogentisate geranylgeranyltransferase
20 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein


Gene co-expression network
sample Sobic002G378000 Sobic002G378000 Sobic008G067100 Sobic008G067100 Sobic002G378000--Sobic008G067100 Sobic010G086900 Sobic010G086900 Sobic002G378000--Sobic010G086900 Sobic001G281500 Sobic001G281500 Sobic002G378000--Sobic001G281500 Sobic003G310100 Sobic003G310100 Sobic002G378000--Sobic003G310100 Sobic009G104700 Sobic009G104700 Sobic002G378000--Sobic009G104700 Sobic003G128400 Sobic003G128400 Sobic002G378000--Sobic003G128400 Sobic007G101300 Sobic007G101300 Sobic002G378000--Sobic007G101300 Sobic005G184300 Sobic005G184300 Sobic002G378000--Sobic005G184300 Sobic001G424300 Sobic001G424300 Sobic002G378000--Sobic001G424300 Sobic008G090900 Sobic008G090900 Sobic008G067100--Sobic008G090900 Sobic007G095500 Sobic007G095500 Sobic008G067100--Sobic007G095500 Sobic004G144400 Sobic004G144400 Sobic008G067100--Sobic004G144400 Sobic002G156100 Sobic002G156100 Sobic008G067100--Sobic002G156100 Sobic001G382800 Sobic001G382800 Sobic008G067100--Sobic001G382800 Sobic004G003900 Sobic004G003900 Sobic008G067100--Sobic004G003900 Sobic008G067100--Sobic003G128400 Sobic004G208600 Sobic004G208600 Sobic008G067100--Sobic004G208600 Sobic008G067100--Sobic002G378000 Sobic001G249400 Sobic001G249400 Sobic010G086900--Sobic001G249400 Sobic009G046800 Sobic009G046800 Sobic010G086900--Sobic009G046800 Sobic010G100800 Sobic010G100800 Sobic010G086900--Sobic010G100800 Sobic010G086900--Sobic002G378000 Sobic001G300100 Sobic001G300100 Sobic010G086900--Sobic001G300100 Sobic010G086900--Sobic004G003900 Sobic002G404200 Sobic002G404200 Sobic010G086900--Sobic002G404200 Sobic010G086900--Sobic008G067100 Sobic004G019500 Sobic004G019500 Sobic010G086900--Sobic004G019500 Sobic006G237100 Sobic006G237100 Sobic001G281500--Sobic006G237100 Sobic007G116100 Sobic007G116100 Sobic001G281500--Sobic007G116100 Sobic006G107600 Sobic006G107600 Sobic001G281500--Sobic006G107600 Sobic001G099000 Sobic001G099000 Sobic001G281500--Sobic001G099000 Sobic001G375000 Sobic001G375000 Sobic001G281500--Sobic001G375000 Sobic007G171800 Sobic007G171800 Sobic001G281500--Sobic007G171800 Sobic006G263800 Sobic006G263800 Sobic001G281500--Sobic006G263800 Sobic010G027200 Sobic010G027200 Sobic001G281500--Sobic010G027200 Sobic001G281500--Sobic005G184300 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic001G437200 Sobic001G437200 Sobic003G310100--Sobic001G437200 Sobic003G310100--Sobic001G281500 Sobic003G310100--Sobic006G237100 Sobic002G424100 Sobic002G424100 Sobic003G310100--Sobic002G424100 Sobic006G111600 Sobic006G111600 Sobic003G310100--Sobic006G111600 Sobic005G110481 Sobic005G110481 Sobic009G104700--Sobic005G110481 Sobic002G158800 Sobic002G158800 Sobic009G104700--Sobic002G158800 Sobic009G104700--Sobic007G101300 Sobic010G011200 Sobic010G011200 Sobic009G104700--Sobic010G011200 Sobic002G013700 Sobic002G013700 Sobic009G104700--Sobic002G013700 Sobic009G104700--Sobic005G184300 Sobic003G444500 Sobic003G444500 Sobic009G104700--Sobic003G444500 Sobic009G104700--Sobic003G128400 Sobic003G373300 Sobic003G373300 Sobic009G104700--Sobic003G373300 Sobic003G128400--Sobic001G375000 Sobic003G128400--Sobic007G101300 Sobic003G045300 Sobic003G045300 Sobic003G128400--Sobic003G045300 Sobic003G128400--Sobic005G184300 Sobic003G128400--Sobic004G003900 Sobic006G055800 Sobic006G055800 Sobic003G128400--Sobic006G055800 Sobic003G128400--Sobic002G156100 Sobic002G297400 Sobic002G297400 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic007G101300--Sobic005G184300 Sobic007G101300--Sobic005G110481 Sobic007G101300--Sobic003G128400 Sobic007G101300--Sobic002G013700 Sobic007G101300--Sobic009G104700 Sobic007G101300--Sobic001G375000 Sobic007G101300--Sobic001G281500 Sobic007G101300--Sobic001G099000 Sobic007G101300--Sobic010G027200 Sobic005G184300--Sobic001G099000 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic005G184300--Sobic002G158800 Sobic001G003900 Sobic001G003900 Sobic005G184300--Sobic001G003900 Sobic005G184300--Sobic002G297400 Sobic002G081500 Sobic002G081500 Sobic005G184300--Sobic002G081500 Sobic005G184300--Sobic006G055800 Sobic005G184300--Sobic005G110481 Sobic001G424300--Sobic003G310100 Sobic001G424300--Sobic001G489800 Sobic001G424300--Sobic003G128400 Sobic009G131600 Sobic009G131600 Sobic001G424300--Sobic009G131600 Sobic001G424300--Sobic001G281500 Sobic005G002900 Sobic005G002900 Sobic001G424300--Sobic005G002900 Sobic001G424300--Sobic006G055800 Sobic001G424300--Sobic002G156100 Sobic001G424300--Sobic001G437200
Octagon: transcription factors


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