Gene annotation
Transcriptome id Sobic.003G381900.1
Synonym MCT, ATMEPCT, ISPD, Sb03g042160
Functional annotation 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed
UniProt C5XEP2
Pfam PF12804
Panther DB PTHR32125 PTHR32125:SF4
NCBI CDD -
KEGG Orthology K00991; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02500 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os01g66360.1 : 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a039481 , Zm00025a026511
Brachypodium KQK10954
Barley -
Wheat TraesCS3A02G403800 , TraesCS3B02G437300 , TraesCS3D02G399000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
2 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
3 Sobic.003G292300 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
4 Sobic.002G127800 - K07052: uncharacterized protein
5 Sobic.008G183700 cbbY protein-related, putative, expressed -
6 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
7 Sobic.005G110481 - -
8 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
9 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
10 Sobic.003G383600 - -
11 Sobic.001G293300 chaperonin, putative, expressed K04078: groES, chaperonin GroES
12 Sobic.001G531400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
13 Sobic.007G101300 expressed protein -
14 Sobic.009G104700 prenyltransferase, putative, expressed K04040: chlG, chlorophyll/bacteriochlorophyll a synthase
15 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
16 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
17 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
18 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
19 Sobic.007G090400 expressed protein -
20 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase


Gene co-expression network
sample Sobic003G381900 Sobic003G381900 Sobic009G124000 Sobic009G124000 Sobic003G381900--Sobic009G124000 Sobic001G376700 Sobic001G376700 Sobic003G381900--Sobic001G376700 Sobic003G292300 Sobic003G292300 Sobic003G381900--Sobic003G292300 Sobic002G127800 Sobic002G127800 Sobic003G381900--Sobic002G127800 Sobic008G183700 Sobic008G183700 Sobic003G381900--Sobic008G183700 Sobic001G069500 Sobic001G069500 Sobic003G381900--Sobic001G069500 Sobic005G110481 Sobic005G110481 Sobic003G381900--Sobic005G110481 Sobic010G011200 Sobic010G011200 Sobic003G381900--Sobic010G011200 Sobic009G001500 Sobic009G001500 Sobic003G381900--Sobic009G001500 Sobic001G486700 Sobic001G486700 Sobic009G124000--Sobic001G486700 Sobic009G124000--Sobic008G183700 Sobic009G124000--Sobic001G376700 Sobic004G275600 Sobic004G275600 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic004G296800 Sobic004G296800 Sobic001G376700--Sobic004G296800 Sobic006G084500 Sobic006G084500 Sobic001G376700--Sobic006G084500 Sobic004G044200 Sobic004G044200 Sobic001G376700--Sobic004G044200 Sobic001G376700--Sobic009G124000 Sobic003G420900 Sobic003G420900 Sobic001G376700--Sobic003G420900 Sobic001G376700--Sobic003G292300 Sobic009G180800 Sobic009G180800 Sobic001G376700--Sobic009G180800 Sobic008G123600 Sobic008G123600 Sobic001G376700--Sobic008G123600 Sobic001G376700--Sobic009G001500 Sobic003G292300--Sobic005G110481 Sobic003G292300--Sobic001G069500 Sobic003G292300--Sobic010G011200 Sobic007G090537 Sobic007G090537 Sobic003G292300--Sobic007G090537 Sobic003G292300--Sobic009G001500 Sobic003G295800 Sobic003G295800 Sobic003G292300--Sobic003G295800 Sobic003G225100 Sobic003G225100 Sobic003G292300--Sobic003G225100 Sobic003G383600 Sobic003G383600 Sobic003G292300--Sobic003G383600 Sobic007G013400 Sobic007G013400 Sobic003G292300--Sobic007G013400 Sobic002G127800--Sobic009G001500 Sobic002G127800--Sobic007G013400 Sobic002G251400 Sobic002G251400 Sobic002G127800--Sobic002G251400 Sobic002G127800--Sobic003G295800 Sobic003G383500 Sobic003G383500 Sobic002G127800--Sobic003G383500 Sobic001G040000 Sobic001G040000 Sobic002G127800--Sobic001G040000 Sobic002G127800--Sobic005G110481 Sobic001G391400 Sobic001G391400 Sobic002G127800--Sobic001G391400 Sobic001G527100 Sobic001G527100 Sobic002G127800--Sobic001G527100 Sobic004G040900 Sobic004G040900 Sobic008G183700--Sobic004G040900 Sobic008G183700--Sobic009G124000 Sobic003G083400 Sobic003G083400 Sobic008G183700--Sobic003G083400 Sobic008G067100 Sobic008G067100 Sobic008G183700--Sobic008G067100 Sobic001G402500 Sobic001G402500 Sobic008G183700--Sobic001G402500 Sobic005G231100 Sobic005G231100 Sobic008G183700--Sobic005G231100 Sobic008G183700--Sobic001G401700 Sobic004G055500 Sobic004G055500 Sobic008G183700--Sobic004G055500 Sobic003G128400 Sobic003G128400 Sobic008G183700--Sobic003G128400 Sobic009G098100 Sobic009G098100 Sobic001G069500--Sobic009G098100 Sobic001G188600 Sobic001G188600 Sobic001G069500--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic001G069500--Sobic007G211100 Sobic001G069500--Sobic003G295800 Sobic001G069500--Sobic003G383600 Sobic001G069500--Sobic008G123600 Sobic001G069500--Sobic009G001500 Sobic008G030000 Sobic008G030000 Sobic001G069500--Sobic008G030000 Sobic001G069500--Sobic007G013400 Sobic005G110481--Sobic010G011200 Sobic001G148200 Sobic001G148200 Sobic005G110481--Sobic001G148200 Sobic007G171800 Sobic007G171800 Sobic005G110481--Sobic007G171800 Sobic009G042200 Sobic009G042200 Sobic005G110481--Sobic009G042200 Sobic007G101300 Sobic007G101300 Sobic005G110481--Sobic007G101300 Sobic009G104700 Sobic009G104700 Sobic005G110481--Sobic009G104700 Sobic005G110481--Sobic007G013400 Sobic002G013700 Sobic002G013700 Sobic005G110481--Sobic002G013700 Sobic005G110481--Sobic002G251400 Sobic010G011200--Sobic005G110481 Sobic010G011200--Sobic007G171800 Sobic010G012900 Sobic010G012900 Sobic010G011200--Sobic010G012900 Sobic010G011200--Sobic001G148200 Sobic010G011200--Sobic002G013700 Sobic010G011200--Sobic009G001500 Sobic001G383900 Sobic001G383900 Sobic010G011200--Sobic001G383900 Sobic010G011200--Sobic009G104700 Sobic010G011200--Sobic009G098100 Sobic009G001500--Sobic007G013400 Sobic009G001500--Sobic003G383500 Sobic009G001500--Sobic003G295800 Sobic009G001500--Sobic004G044200 Sobic004G044000 Sobic004G044000 Sobic009G001500--Sobic004G044000 Sobic009G001500--Sobic003G383600 Sobic009G001500--Sobic007G211100 Sobic009G001500--Sobic008G030000 Sobic009G001500--Sobic001G383900
Octagon: transcription factors


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