Gene annotation
Transcriptome id Sobic.003G383600.1
Synonym
Functional annotation -
UniProt A0A1B6Q7G6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
2 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
3 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
4 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
5 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
6 Sobic.008G030000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@elongation factor P, putative, expressed K02356: elongation factor P
7 Sobic.009G098100 T-complex protein, putative, expressed -
8 Sobic.010G215500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
9 Sobic.003G383500 rhodanese-like, putative, expressed -
10 Sobic.007G185100 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
11 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
12 Sobic.001G383900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G435600 - -
14 Sobic.007G211100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03216: trmL, tRNA (cytidine/uridine-2'-O-)-methyltransferase
15 Sobic.004G317900 expressed protein -
16 Sobic.002G297900 CDGSH iron sulfur domain-containing protein 1, putative, expressed -
17 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
18 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
19 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
20 Sobic.005G110481 - -


Gene co-expression network
sample Sobic003G383600 Sobic003G383600 Sobic003G295800 Sobic003G295800 Sobic003G383600--Sobic003G295800 Sobic007G013400 Sobic007G013400 Sobic003G383600--Sobic007G013400 Sobic008G123600 Sobic008G123600 Sobic003G383600--Sobic008G123600 Sobic001G069500 Sobic001G069500 Sobic003G383600--Sobic001G069500 Sobic009G001500 Sobic009G001500 Sobic003G383600--Sobic009G001500 Sobic008G030000 Sobic008G030000 Sobic003G383600--Sobic008G030000 Sobic009G098100 Sobic009G098100 Sobic003G383600--Sobic009G098100 Sobic010G215500 Sobic010G215500 Sobic003G383600--Sobic010G215500 Sobic003G383500 Sobic003G383500 Sobic003G383600--Sobic003G383500 Sobic003G295800--Sobic007G013400 Sobic003G295800--Sobic009G001500 Sobic001G040000 Sobic001G040000 Sobic003G295800--Sobic001G040000 Sobic004G317900 Sobic004G317900 Sobic003G295800--Sobic004G317900 Sobic003G295800--Sobic009G098100 Sobic001G017000 Sobic001G017000 Sobic003G295800--Sobic001G017000 Sobic001G027600 Sobic001G027600 Sobic003G295800--Sobic001G027600 Sobic001G453300 Sobic001G453300 Sobic003G295800--Sobic001G453300 Sobic003G295800--Sobic003G383500 Sobic007G013400--Sobic003G383500 Sobic007G013400--Sobic003G295800 Sobic007G013400--Sobic009G001500 Sobic003G261200 Sobic003G261200 Sobic007G013400--Sobic003G261200 Sobic001G475600 Sobic001G475600 Sobic007G013400--Sobic001G475600 Sobic002G251400 Sobic002G251400 Sobic007G013400--Sobic002G251400 Sobic007G013400--Sobic003G383600 Sobic007G013400--Sobic001G040000 Sobic007G211100 Sobic007G211100 Sobic007G013400--Sobic007G211100 Sobic004G076000 Sobic004G076000 Sobic008G123600--Sobic004G076000 Sobic008G123600--Sobic003G383600 Sobic001G003600 Sobic001G003600 Sobic008G123600--Sobic001G003600 Sobic001G323801 Sobic001G323801 Sobic008G123600--Sobic001G323801 Sobic008G123600--Sobic001G069500 Sobic001G435600 Sobic001G435600 Sobic008G123600--Sobic001G435600 Sobic009G115050 Sobic009G115050 Sobic008G123600--Sobic009G115050 Sobic008G123600--Sobic003G295800 Sobic006G172700 Sobic006G172700 Sobic008G123600--Sobic006G172700 Sobic001G069500--Sobic009G098100 Sobic001G188600 Sobic001G188600 Sobic001G069500--Sobic001G188600 Sobic001G069500--Sobic007G211100 Sobic001G069500--Sobic003G295800 Sobic001G069500--Sobic003G383600 Sobic001G069500--Sobic008G123600 Sobic001G069500--Sobic009G001500 Sobic001G069500--Sobic008G030000 Sobic001G069500--Sobic007G013400 Sobic009G001500--Sobic007G013400 Sobic009G001500--Sobic003G383500 Sobic009G001500--Sobic003G295800 Sobic004G044200 Sobic004G044200 Sobic009G001500--Sobic004G044200 Sobic004G044000 Sobic004G044000 Sobic009G001500--Sobic004G044000 Sobic009G001500--Sobic003G383600 Sobic009G001500--Sobic007G211100 Sobic009G001500--Sobic008G030000 Sobic001G383900 Sobic001G383900 Sobic009G001500--Sobic001G383900 Sobic008G030000--Sobic003G295800 Sobic008G030000--Sobic009G098100 Sobic008G030000--Sobic009G001500 Sobic008G030000--Sobic003G383600 Sobic008G030000--Sobic001G453300 Sobic001G357200 Sobic001G357200 Sobic008G030000--Sobic001G357200 Sobic007G185100 Sobic007G185100 Sobic008G030000--Sobic007G185100 Sobic008G030000--Sobic001G383900 Sobic008G030000--Sobic007G013400 Sobic009G098100--Sobic001G069500 Sobic009G098100--Sobic003G295800 Sobic009G098100--Sobic001G188600 Sobic009G098100--Sobic001G453300 Sobic009G098100--Sobic001G383900 Sobic009G098100--Sobic001G027600 Sobic009G098100--Sobic008G030000 Sobic009G098100--Sobic004G076000 Sobic002G020100 Sobic002G020100 Sobic009G098100--Sobic002G020100 Sobic010G215500--Sobic003G295800 Sobic010G215500--Sobic007G185100 Sobic003G328200 Sobic003G328200 Sobic010G215500--Sobic003G328200 Sobic010G215500--Sobic003G383600 Sobic010G215500--Sobic007G013400 Sobic002G297900 Sobic002G297900 Sobic010G215500--Sobic002G297900 Sobic010G215500--Sobic004G076000 Sobic010G215500--Sobic004G317900 Sobic004G335800 Sobic004G335800 Sobic010G215500--Sobic004G335800 Sobic003G383500--Sobic007G013400 Sobic003G383500--Sobic009G001500 Sobic003G383500--Sobic003G295800 Sobic003G383500--Sobic007G211100 Sobic003G383500--Sobic003G261200 Sobic003G383500--Sobic004G044000 Sobic003G383500--Sobic003G383600 Sobic005G110481 Sobic005G110481 Sobic003G383500--Sobic005G110481 Sobic004G109000 Sobic004G109000 Sobic003G383500--Sobic004G109000
Octagon: transcription factors


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