Gene annotation
Transcriptome id Sobic.007G185100.1
Synonym Sb07g025510
Functional annotation peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
UniProt C5YHA0
Pfam PF00254
Panther DB PTHR10516 PTHR10516:SF264
NCBI CDD KOG0544; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K01802; peptidylprolyl isomerase
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT2G43560 : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os08g42850.1 : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
MaizeGDB (Corn) Zm00025a005336
Brachypodium PNT68520
Barley HORVU7Hr1G056240.3 , HORVU7Hr1G056240.6 , HORVU7Hr1G056240.7 , HORVU7Hr1G056240.5 , HORVU7Hr1G056240.8 , HORVU7Hr1G056240.9
Wheat TraesCS7A02G266500 , TraesCS7A02G266500 , TraesCS7D02G268300 , TraesCS7B02G166000 , TraesCS7B02G166000 , TraesCS7B02G166000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G317900 expressed protein -
2 Sobic.010G255600 thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed -
3 Sobic.010G233800 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
4 Sobic.010G215500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
5 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
6 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
7 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
8 Sobic.008G030000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@elongation factor P, putative, expressed K02356: elongation factor P
9 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
10 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
11 Sobic.003G114200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
12 Sobic.001G203000 thylakoid lumenal protein, putative, expressed -
13 Sobic.004G019300 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
14 Sobic.003G383600 - -
15 Sobic.001G453300 50S ribosomal protein L15, chloroplast precursor, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15
16 Sobic.004G024600 expressed protein -
17 Sobic.004G054500 porphobilinogen deaminase, chloroplast precursor, putative, expressed K01749: hemC, hydroxymethylbilane synthase
18 Sobic.001G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal protein S6, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
19 Sobic.004G116100 50S ribosomal protein L21, chloroplast precursor, putative, expressed K02888: RP-L21, MRPL21, large subunit ribosomal protein L21
20 Sobic.008G112300 -(PubMedID : 29017446)@-(PubMedID : 26976818)@citrate transporter, putative, expressed -


Gene co-expression network
sample Sobic007G185100 Sobic007G185100 Sobic004G317900 Sobic004G317900 Sobic007G185100--Sobic004G317900 Sobic010G255600 Sobic010G255600 Sobic007G185100--Sobic010G255600 Sobic010G233800 Sobic010G233800 Sobic007G185100--Sobic010G233800 Sobic010G215500 Sobic010G215500 Sobic007G185100--Sobic010G215500 Sobic003G295800 Sobic003G295800 Sobic007G185100--Sobic003G295800 Sobic007G170800 Sobic007G170800 Sobic007G185100--Sobic007G170800 Sobic003G328200 Sobic003G328200 Sobic007G185100--Sobic003G328200 Sobic008G030000 Sobic008G030000 Sobic007G185100--Sobic008G030000 Sobic004G076000 Sobic004G076000 Sobic007G185100--Sobic004G076000 Sobic003G246400 Sobic003G246400 Sobic004G317900--Sobic003G246400 Sobic004G317900--Sobic007G185100 Sobic004G317900--Sobic003G295800 Sobic004G317900--Sobic010G233800 Sobic001G027600 Sobic001G027600 Sobic004G317900--Sobic001G027600 Sobic001G453300 Sobic001G453300 Sobic004G317900--Sobic001G453300 Sobic004G317900--Sobic003G328200 Sobic001G017000 Sobic001G017000 Sobic004G317900--Sobic001G017000 Sobic004G054500 Sobic004G054500 Sobic004G317900--Sobic004G054500 Sobic001G382100 Sobic001G382100 Sobic010G255600--Sobic001G382100 Sobic001G203000 Sobic001G203000 Sobic010G255600--Sobic001G203000 Sobic009G091850 Sobic009G091850 Sobic010G255600--Sobic009G091850 Sobic008G051000 Sobic008G051000 Sobic010G255600--Sobic008G051000 Sobic004G036100 Sobic004G036100 Sobic010G255600--Sobic004G036100 Sobic010G255600--Sobic007G185100 Sobic010G255600--Sobic004G054500 Sobic003G099400 Sobic003G099400 Sobic010G255600--Sobic003G099400 Sobic007G116950 Sobic007G116950 Sobic010G255600--Sobic007G116950 Sobic001G076500 Sobic001G076500 Sobic010G233800--Sobic001G076500 Sobic010G233800--Sobic001G453300 Sobic010G233800--Sobic004G317900 Sobic001G427000 Sobic001G427000 Sobic010G233800--Sobic001G427000 Sobic003G393800 Sobic003G393800 Sobic010G233800--Sobic003G393800 Sobic010G233800--Sobic003G246400 Sobic010G233800--Sobic001G027600 Sobic010G233800--Sobic007G185100 Sobic004G116100 Sobic004G116100 Sobic010G233800--Sobic004G116100 Sobic010G215500--Sobic003G295800 Sobic010G215500--Sobic007G185100 Sobic010G215500--Sobic003G328200 Sobic003G383600 Sobic003G383600 Sobic010G215500--Sobic003G383600 Sobic007G013400 Sobic007G013400 Sobic010G215500--Sobic007G013400 Sobic002G297900 Sobic002G297900 Sobic010G215500--Sobic002G297900 Sobic010G215500--Sobic004G076000 Sobic010G215500--Sobic004G317900 Sobic004G335800 Sobic004G335800 Sobic010G215500--Sobic004G335800 Sobic003G295800--Sobic007G013400 Sobic009G001500 Sobic009G001500 Sobic003G295800--Sobic009G001500 Sobic001G040000 Sobic001G040000 Sobic003G295800--Sobic001G040000 Sobic003G295800--Sobic004G317900 Sobic009G098100 Sobic009G098100 Sobic003G295800--Sobic009G098100 Sobic003G295800--Sobic001G017000 Sobic003G295800--Sobic001G027600 Sobic003G295800--Sobic001G453300 Sobic003G383500 Sobic003G383500 Sobic003G295800--Sobic003G383500 Sobic004G060700 Sobic004G060700 Sobic007G170800--Sobic004G060700 Sobic003G114200 Sobic003G114200 Sobic007G170800--Sobic003G114200 Sobic007G009600 Sobic007G009600 Sobic007G170800--Sobic007G009600 Sobic002G416950 Sobic002G416950 Sobic007G170800--Sobic002G416950 Sobic008G163200 Sobic008G163200 Sobic007G170800--Sobic008G163200 Sobic001G435600 Sobic001G435600 Sobic007G170800--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic007G170800--Sobic002G415300 Sobic001G541300 Sobic001G541300 Sobic007G170800--Sobic001G541300 Sobic001G379300 Sobic001G379300 Sobic007G170800--Sobic001G379300 Sobic001G527100 Sobic001G527100 Sobic003G328200--Sobic001G527100 Sobic003G328200--Sobic001G040000 Sobic003G328200--Sobic004G317900 Sobic003G328200--Sobic003G246400 Sobic001G240000 Sobic001G240000 Sobic003G328200--Sobic001G240000 Sobic003G328200--Sobic003G295800 Sobic003G328200--Sobic004G116100 Sobic004G311100 Sobic004G311100 Sobic003G328200--Sobic004G311100 Sobic003G386300 Sobic003G386300 Sobic003G328200--Sobic003G386300 Sobic008G030000--Sobic003G295800 Sobic008G030000--Sobic009G098100 Sobic008G030000--Sobic009G001500 Sobic008G030000--Sobic003G383600 Sobic008G030000--Sobic001G453300 Sobic001G357200 Sobic001G357200 Sobic008G030000--Sobic001G357200 Sobic008G030000--Sobic007G185100 Sobic001G383900 Sobic001G383900 Sobic008G030000--Sobic001G383900 Sobic008G030000--Sobic007G013400 Sobic001G323801 Sobic001G323801 Sobic004G076000--Sobic001G323801 Sobic009G115050 Sobic009G115050 Sobic004G076000--Sobic009G115050 Sobic001G003600 Sobic001G003600 Sobic004G076000--Sobic001G003600 Sobic008G123600 Sobic008G123600 Sobic004G076000--Sobic008G123600 Sobic004G076000--Sobic001G017000 Sobic002G020100 Sobic002G020100 Sobic004G076000--Sobic002G020100 Sobic005G110436 Sobic005G110436 Sobic004G076000--Sobic005G110436 Sobic006G172700 Sobic006G172700 Sobic004G076000--Sobic006G172700 Sobic004G076000--Sobic003G295800
Octagon: transcription factors


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