Gene annotation
Transcriptome id Sobic.005G045000.1
Synonym Sb05g003730, DGD1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
UniProt A0A1B6PQ40
Pfam PF00534
Panther DB PTHR12526 PTHR12526:SF352
NCBI CDD -
KEGG Orthology K09480; digalactosyldiacylglycerol synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11670 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os11g05990.1 : digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a034139
Brachypodium KQJ89346 , KQJ99777 , KQJ99778
Barley HORVU4Hr1G020770.4 , HORVU4Hr1G020770.5 , HORVU4Hr1G020770.2 , HORVU4Hr1G020770.3 , HORVU4Hr1G020770.1
Wheat TraesCS2D02G295800 , TraesCS2D02G295800 , TraesCSU02G187100 , TraesCSU02G187100 , TraesCS4A02G200600 , TraesCSU02G186800 , TraesCSU02G186800 , TraesCSU02G192800 , TraesCS4D02G112200
Populus PNS98323 , PNS98325 , PNS98324


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
2 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
3 Sobic.001G468700 expressed protein -
4 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.004G028500 pyridoxal biosynthesis protein PDX2, putative, expressed K08681: pdxT, 5'-phosphate synthase pdxT subunit
6 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
7 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
8 Sobic.008G151100 protein kinase domain containing protein, expressed -
9 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
10 Sobic.003G004200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed -
11 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
12 Sobic.009G209300 starch synthase, putative, expressed -
13 Sobic.003G342100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroflavonol-4-reductase, putative, expressed -
14 Sobic.007G047400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@MYB family transcription factor, putative, expressed K12133: MYB-related transcription factor LHY
15 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G332800 GTPase-activating protein, putative, expressed -
17 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
18 Sobic.010G097600 OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
19 Sobic.002G121600 myb-like DNA-binding domain containing protein, expressed -
20 Sobic.009G015100 ACT domain containing protein, expressed -


Gene co-expression network
sample Sobic005G045000 Sobic005G045000 Sobic003G313300 Sobic003G313300 Sobic005G045000--Sobic003G313300 Sobic001G305600 Sobic001G305600 Sobic005G045000--Sobic001G305600 Sobic001G468700 Sobic001G468700 Sobic005G045000--Sobic001G468700 Sobic003G017100 Sobic003G017100 Sobic005G045000--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic005G045000--Sobic004G028500 Sobic003G191700 Sobic003G191700 Sobic005G045000--Sobic003G191700 Sobic004G347800 Sobic004G347800 Sobic005G045000--Sobic004G347800 Sobic008G151100 Sobic008G151100 Sobic005G045000--Sobic008G151100 Sobic008G168300 Sobic008G168300 Sobic005G045000--Sobic008G168300 Sobic003G313300--Sobic003G017100 Sobic003G313300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G313300--Sobic010G176200 Sobic007G047400 Sobic007G047400 Sobic003G313300--Sobic007G047400 Sobic003G313300--Sobic004G028500 Sobic001G017300 Sobic001G017300 Sobic003G313300--Sobic001G017300 Sobic003G313300--Sobic001G468700 Sobic010G002700 Sobic010G002700 Sobic003G313300--Sobic010G002700 Sobic005G206300 Sobic005G206300 Sobic003G313300--Sobic005G206300 Sobic001G305600--Sobic004G347800 Sobic001G305600--Sobic005G045000 Sobic006G064100 Sobic006G064100 Sobic001G305600--Sobic006G064100 Sobic002G273300 Sobic002G273300 Sobic001G305600--Sobic002G273300 Sobic001G484400 Sobic001G484400 Sobic001G305600--Sobic001G484400 Sobic001G305600--Sobic008G168300 Sobic001G531500 Sobic001G531500 Sobic001G305600--Sobic001G531500 Sobic003G418100 Sobic003G418100 Sobic001G305600--Sobic003G418100 Sobic001G305600--Sobic010G176200 Sobic001G468700--Sobic010G002700 Sobic001G468700--Sobic003G017100 Sobic001G468700--Sobic004G028500 Sobic001G468700--Sobic001G017300 Sobic009G121000 Sobic009G121000 Sobic001G468700--Sobic009G121000 Sobic003G247400 Sobic003G247400 Sobic001G468700--Sobic003G247400 Sobic001G468700--Sobic003G313300 Sobic003G276300 Sobic003G276300 Sobic001G468700--Sobic003G276300 Sobic003G004200 Sobic003G004200 Sobic001G468700--Sobic003G004200 Sobic002G006600 Sobic002G006600 Sobic003G017100--Sobic002G006600 Sobic003G017100--Sobic010G002700 Sobic001G198100 Sobic001G198100 Sobic003G017100--Sobic001G198100 Sobic003G017100--Sobic003G276300 Sobic001G169900 Sobic001G169900 Sobic003G017100--Sobic001G169900 Sobic003G017100--Sobic003G313300 Sobic003G017100--Sobic001G468700 Sobic003G017100--Sobic003G247400 Sobic003G017100--Sobic003G191700 Sobic004G028500--Sobic001G468700 Sobic004G028500--Sobic003G313300 Sobic001G100100 Sobic001G100100 Sobic004G028500--Sobic001G100100 Sobic004G028500--Sobic003G017100 Sobic004G028500--Sobic010G002700 Sobic004G028500--Sobic005G045000 Sobic004G028500--Sobic002G006600 Sobic004G028500--Sobic003G004200 Sobic004G028500--Sobic001G198100 Sobic004G042200 Sobic004G042200 Sobic003G191700--Sobic004G042200 Sobic003G191700--Sobic003G313300 Sobic006G133900 Sobic006G133900 Sobic003G191700--Sobic006G133900 Sobic003G229300 Sobic003G229300 Sobic003G191700--Sobic003G229300 Sobic003G191700--Sobic003G017100 Sobic009G038900 Sobic009G038900 Sobic003G191700--Sobic009G038900 Sobic007G198300 Sobic007G198300 Sobic003G191700--Sobic007G198300 Sobic003G155100 Sobic003G155100 Sobic003G191700--Sobic003G155100 Sobic003G191700--Sobic010G002700 Sobic004G347800--Sobic010G176200 Sobic004G347800--Sobic003G229300 Sobic004G347800--Sobic001G305600 Sobic008G130000 Sobic008G130000 Sobic004G347800--Sobic008G130000 Sobic004G356400 Sobic004G356400 Sobic004G347800--Sobic004G356400 Sobic004G347800--Sobic005G045000 Sobic004G347800--Sobic003G313300 Sobic003G021100 Sobic003G021100 Sobic004G347800--Sobic003G021100 Sobic006G093800 Sobic006G093800 Sobic004G347800--Sobic006G093800 Sobic003G198800 Sobic003G198800 Sobic008G151100--Sobic003G198800 Sobic001G381600 Sobic001G381600 Sobic008G151100--Sobic001G381600 Sobic001G212300 Sobic001G212300 Sobic008G151100--Sobic001G212300 Sobic008G151100--Sobic003G191700 Sobic009G238000 Sobic009G238000 Sobic008G151100--Sobic009G238000 Sobic008G151100--Sobic005G045000 Sobic010G097600 Sobic010G097600 Sobic008G151100--Sobic010G097600 Sobic008G151100--Sobic003G229300 Sobic008G151100--Sobic007G198300 Sobic004G355700 Sobic004G355700 Sobic008G168300--Sobic004G355700 Sobic008G168300--Sobic001G017300 Sobic002G121600 Sobic002G121600 Sobic008G168300--Sobic002G121600 Sobic008G168300--Sobic005G045000 Sobic008G168300--Sobic003G229300 Sobic008G168300--Sobic001G468700 Sobic010G085100 Sobic010G085100 Sobic008G168300--Sobic010G085100 Sobic001G239500 Sobic001G239500 Sobic008G168300--Sobic001G239500 Sobic001G514800 Sobic001G514800 Sobic008G168300--Sobic001G514800
Octagon: transcription factors


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