Gene annotation
Transcriptome id Sobic.009G015100.2
Synonym Sb09g001450
Functional annotation ACT domain containing protein, expressed
UniProt A0A1Z5R0D7
Pfam PF01842
Panther DB PTHR31096 PTHR31096:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016597; amino acid binding GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G39570 : ACT domain-containing protein
RAP-DB (Rice) LOC_Os05g02220.3 : ACT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040916 , Zm00025a038251
Brachypodium KQK07718 , KQK07717
Barley -
Wheat TraesCS1D02G037700 , TraesCS1D02G037700 , TraesCS1D02G037700 , TraesCS1A02G036100 , TraesCS1A02G036100 , TraesCS1B02G046300 , TraesCS1B02G046300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.005G231500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
3 Sobic.005G206300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATA15 protein, putative, expressed -
4 Sobic.010G255300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
5 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
6 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
7 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
8 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
9 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.010G249700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
12 Sobic.004G154200 expressed protein -
13 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -
14 Sobic.003G391200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
15 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
16 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
17 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
18 Sobic.003G021100 expressed protein -
19 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
20 Sobic.003G185900 protein phosphatase 2C, putative, expressed -


Gene co-expression network
sample Sobic009G015100 Sobic009G015100 Sobic007G105500 Sobic007G105500 Sobic009G015100--Sobic007G105500 Sobic005G231500 Sobic005G231500 Sobic009G015100--Sobic005G231500 Sobic005G206300 Sobic005G206300 Sobic009G015100--Sobic005G206300 Sobic010G255300 Sobic010G255300 Sobic009G015100--Sobic010G255300 Sobic004G281800 Sobic004G281800 Sobic009G015100--Sobic004G281800 Sobic005G101200 Sobic005G101200 Sobic009G015100--Sobic005G101200 Sobic010G085100 Sobic010G085100 Sobic009G015100--Sobic010G085100 Sobic002G404800 Sobic002G404800 Sobic009G015100--Sobic002G404800 Sobic004G356400 Sobic004G356400 Sobic009G015100--Sobic004G356400 Sobic004G215800 Sobic004G215800 Sobic007G105500--Sobic004G215800 Sobic003G036200 Sobic003G036200 Sobic007G105500--Sobic003G036200 Sobic007G105500--Sobic002G404800 Sobic003G185900 Sobic003G185900 Sobic007G105500--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic007G105500--Sobic003G367500 Sobic007G105500--Sobic005G101200 Sobic009G256100 Sobic009G256100 Sobic007G105500--Sobic009G256100 Sobic008G033000 Sobic008G033000 Sobic007G105500--Sobic008G033000 Sobic007G105500--Sobic010G085100 Sobic005G231500--Sobic003G367500 Sobic010G251700 Sobic010G251700 Sobic005G231500--Sobic010G251700 Sobic005G231500--Sobic005G206300 Sobic004G154200 Sobic004G154200 Sobic005G231500--Sobic004G154200 Sobic005G231500--Sobic007G105500 Sobic001G329400 Sobic001G329400 Sobic005G231500--Sobic001G329400 Sobic001G134100 Sobic001G134100 Sobic005G231500--Sobic001G134100 Sobic005G231500--Sobic004G356400 Sobic005G231500--Sobic004G215800 Sobic005G206300--Sobic005G231500 Sobic005G206300--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic005G206300--Sobic001G017300 Sobic003G391200 Sobic003G391200 Sobic005G206300--Sobic003G391200 Sobic005G206300--Sobic005G101200 Sobic005G206300--Sobic009G015100 Sobic005G206300--Sobic004G154200 Sobic010G249700 Sobic010G249700 Sobic005G206300--Sobic010G249700 Sobic003G313300 Sobic003G313300 Sobic005G206300--Sobic003G313300 Sobic010G255300--Sobic007G105500 Sobic010G255300--Sobic010G249700 Sobic010G255300--Sobic009G015100 Sobic010G255300--Sobic005G101200 Sobic010G255300--Sobic003G367500 Sobic010G255300--Sobic002G404800 Sobic010G255300--Sobic005G206300 Sobic010G255300--Sobic004G356400 Sobic010G255300--Sobic003G036200 Sobic009G038900 Sobic009G038900 Sobic004G281800--Sobic009G038900 Sobic004G281800--Sobic005G101200 Sobic001G352400 Sobic001G352400 Sobic004G281800--Sobic001G352400 Sobic010G275700 Sobic010G275700 Sobic004G281800--Sobic010G275700 Sobic003G021100 Sobic003G021100 Sobic004G281800--Sobic003G021100 Sobic002G382700 Sobic002G382700 Sobic004G281800--Sobic002G382700 Sobic005G106600 Sobic005G106600 Sobic004G281800--Sobic005G106600 Sobic004G312600 Sobic004G312600 Sobic004G281800--Sobic004G312600 Sobic003G220100 Sobic003G220100 Sobic004G281800--Sobic003G220100 Sobic004G189800 Sobic004G189800 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic005G101200--Sobic002G404800 Sobic001G258200 Sobic001G258200 Sobic005G101200--Sobic001G258200 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic005G101200--Sobic010G085100 Sobic005G101200--Sobic004G281800 Sobic010G085100--Sobic005G101200 Sobic010G085100--Sobic003G185900 Sobic010G085100--Sobic007G105500 Sobic010G085100--Sobic002G404800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic010G085100--Sobic003G036200 Sobic010G085100--Sobic008G033000 Sobic010G085100--Sobic004G154200 Sobic002G404800--Sobic007G105500 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic002G404800--Sobic005G101200 Sobic002G390100 Sobic002G390100 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic002G404800--Sobic004G112100 Sobic004G356400--Sobic001G017300 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic004G356400--Sobic003G185900 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G356400--Sobic004G189800 Sobic004G356400--Sobic001G258200
Octagon: transcription factors


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