Gene annotation
Transcriptome id Sobic.004G154200.1
Synonym Sb04g020550
Functional annotation expressed protein
UniProt C5XSK5
Pfam PF12796
Panther DB PTHR24198 PTHR24198:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01750 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os05g23320.1 : expressed protein
MaizeGDB (Corn) Zm00025a020393 , Zm00025a021280
Brachypodium KQK06830 , PNT71529 , PNT68977 , KQK00209 , KQK00208
Barley HORVU4Hr1G032980.10 , HORVU4Hr1G073880.8 , HORVU4Hr1G073880.9 , HORVU4Hr1G073880.4 , HORVU4Hr1G073880.6 , HORVU4Hr1G073880.7 , HORVU4Hr1G073880.1 , HORVU1Hr1G040660.6 , HORVU3Hr1G033250.8 , HORVU4Hr1G073880.13 , HORVU4Hr1G073880.11 , HORVU1Hr1G040660.3 , HORVU1Hr1G040660.1 , HORVU1Hr1G040660.5 , HORVU1Hr1G040660.9 , HORVU1Hr1G040660.8 , HORVU3Hr1G033250.9 , HORVU3Hr1G033250.1 , HORVU4Hr1G032980.1 , HORVU4Hr1G032980.6 , HORVU4Hr1G032980.7 , HORVU1Hr1G040660.13 , HORVU1Hr1G040660.12 , HORVU1Hr1G040660.11 , HORVU1Hr1G040660.10 , HORVU1Hr1G040660.16 , HORVU1Hr1G040660.15 , HORVU1Hr1G040660.14 , HORVU4Hr1G032980.2 , HORVU4Hr1G032980.3 , HORVU4Hr1G032980.4 , HORVU4Hr1G032980.5 , HORVU4Hr1G032980.8 , HORVU4Hr1G032980.9 , HORVU3Hr1G033250.2 , HORVU3Hr1G033250.3 , HORVU3Hr1G033250.6 , HORVU3Hr1G033250.7 , HORVU3Hr1G033250.4 , HORVU3Hr1G033250.5
Wheat TraesCS3A02G170800 , TraesCS3D02G171200 , TraesCS3B02G195800
Populus -


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cDNA sequences
Sobic.004G154200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
2 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
3 Sobic.003G398800 expressed protein -
4 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
6 Sobic.005G231500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
7 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
8 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
10 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
11 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
12 Sobic.004G027600 expressed protein -
13 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
14 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
15 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
16 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
17 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
19 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -
20 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic004G154200 Sobic004G154200 Sobic003G367500 Sobic003G367500 Sobic004G154200--Sobic003G367500 Sobic003G185900 Sobic003G185900 Sobic004G154200--Sobic003G185900 Sobic003G398800 Sobic003G398800 Sobic004G154200--Sobic003G398800 Sobic007G105500 Sobic007G105500 Sobic004G154200--Sobic007G105500 Sobic010G067100 Sobic010G067100 Sobic004G154200--Sobic010G067100 Sobic005G231500 Sobic005G231500 Sobic004G154200--Sobic005G231500 Sobic010G085100 Sobic010G085100 Sobic004G154200--Sobic010G085100 Sobic003G127800 Sobic003G127800 Sobic004G154200--Sobic003G127800 Sobic001G329400 Sobic001G329400 Sobic004G154200--Sobic001G329400 Sobic004G215800 Sobic004G215800 Sobic003G367500--Sobic004G215800 Sobic003G367500--Sobic007G105500 Sobic003G367500--Sobic003G398800 Sobic003G367500--Sobic004G154200 Sobic010G039500 Sobic010G039500 Sobic003G367500--Sobic010G039500 Sobic002G324500 Sobic002G324500 Sobic003G367500--Sobic002G324500 Sobic003G367500--Sobic003G127800 Sobic004G059800 Sobic004G059800 Sobic003G367500--Sobic004G059800 Sobic005G089600 Sobic005G089600 Sobic003G367500--Sobic005G089600 Sobic008G033000 Sobic008G033000 Sobic003G185900--Sobic008G033000 Sobic001G504400 Sobic001G504400 Sobic003G185900--Sobic001G504400 Sobic001G258200 Sobic001G258200 Sobic003G185900--Sobic001G258200 Sobic003G185900--Sobic010G067100 Sobic003G185900--Sobic007G105500 Sobic003G185900--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic003G185900--Sobic005G068700 Sobic009G038701 Sobic009G038701 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic006G238200 Sobic006G238200 Sobic003G398800--Sobic006G238200 Sobic003G306200 Sobic003G306200 Sobic003G398800--Sobic003G306200 Sobic009G056700 Sobic009G056700 Sobic003G398800--Sobic009G056700 Sobic007G009200 Sobic007G009200 Sobic003G398800--Sobic007G009200 Sobic007G103400 Sobic007G103400 Sobic003G398800--Sobic007G103400 Sobic009G129300 Sobic009G129300 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G431700 Sobic003G431700 Sobic003G398800--Sobic003G431700 Sobic001G491000 Sobic001G491000 Sobic003G398800--Sobic001G491000 Sobic007G105500--Sobic004G215800 Sobic007G105500--Sobic003G036200 Sobic002G404800 Sobic002G404800 Sobic007G105500--Sobic002G404800 Sobic007G105500--Sobic003G185900 Sobic007G105500--Sobic003G367500 Sobic005G101200 Sobic005G101200 Sobic007G105500--Sobic005G101200 Sobic009G256100 Sobic009G256100 Sobic007G105500--Sobic009G256100 Sobic007G105500--Sobic008G033000 Sobic007G105500--Sobic010G085100 Sobic010G067100--Sobic003G185900 Sobic010G067100--Sobic001G504400 Sobic010G067100--Sobic003G398800 Sobic010G067100--Sobic001G258200 Sobic010G067100--Sobic007G105500 Sobic006G158100 Sobic006G158100 Sobic010G067100--Sobic006G158100 Sobic002G206300 Sobic002G206300 Sobic010G067100--Sobic002G206300 Sobic010G067100--Sobic009G038701 Sobic010G067100--Sobic008G033000 Sobic005G231500--Sobic003G367500 Sobic010G251700 Sobic010G251700 Sobic005G231500--Sobic010G251700 Sobic005G206300 Sobic005G206300 Sobic005G231500--Sobic005G206300 Sobic005G231500--Sobic004G154200 Sobic005G231500--Sobic007G105500 Sobic005G231500--Sobic001G329400 Sobic001G134100 Sobic001G134100 Sobic005G231500--Sobic001G134100 Sobic004G356400 Sobic004G356400 Sobic005G231500--Sobic004G356400 Sobic005G231500--Sobic004G215800 Sobic010G085100--Sobic005G101200 Sobic010G085100--Sobic003G185900 Sobic010G085100--Sobic007G105500 Sobic010G085100--Sobic002G404800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic010G085100--Sobic003G036200 Sobic010G085100--Sobic008G033000 Sobic010G085100--Sobic004G154200 Sobic007G161500 Sobic007G161500 Sobic003G127800--Sobic007G161500 Sobic003G127800--Sobic004G059800 Sobic003G127800--Sobic010G039500 Sobic003G127800--Sobic001G491000 Sobic003G127800--Sobic009G129300 Sobic005G056400 Sobic005G056400 Sobic003G127800--Sobic005G056400 Sobic003G127800--Sobic001G329400 Sobic003G127800--Sobic003G367500 Sobic006G153400 Sobic006G153400 Sobic003G127800--Sobic006G153400 Sobic003G024300 Sobic003G024300 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic006G244000 Sobic006G244000 Sobic001G329400--Sobic006G244000 Sobic001G329400--Sobic003G127800 Sobic001G329400--Sobic009G129300 Sobic007G140800 Sobic007G140800 Sobic001G329400--Sobic007G140800 Sobic004G283100 Sobic004G283100 Sobic001G329400--Sobic004G283100 Sobic001G329400--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic001G329400--Sobic009G104800
Octagon: transcription factors


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