Gene annotation
Transcriptome id Sobic.010G085100.1
Synonym KCA2, KAC2, Sb10g007360
Functional annotation geminivirus Rep-interacting motor protein, putative, expressed
UniProt A0A194YI09 , C6JSN1
Pfam PF00225
Panther DB PTHR24115 PTHR24115:SF469
NCBI CDD KOG0239; Kinesin (KAR3 subfamily)
KEGG Orthology -
Gene Ontology GO:0008017; microtubule binding GO:0007018microtubule-based movement GO:0005524ATP binding GO:0003777microtubule motor activity GO:0005871kinesin complex


Orthologs (automatic annotation)
TAIR AT5G10470 : kinesin like protein for actin based chloroplast movement 1
RAP-DB (Rice) LOC_Os06g11380.1 : geminivirus Rep-interacting motor protein, putative, expressed
MaizeGDB (Corn) Zm00025a056366 , Zm00025a049538 , Zm00025a054378 , Zm00025a009567 , Zm00025a013007
Brachypodium KQK18997
Barley HORVU7Hr1G036090.7 , HORVU7Hr1G036090.6 , HORVU7Hr1G036090.5 , HORVU7Hr1G036090.4 , HORVU7Hr1G036090.3 , HORVU7Hr1G036090.2 , HORVU7Hr1G036090.1 , HORVU7Hr1G036090.8
Wheat TraesCS7D02G176200 , TraesCS7A02G174900 , TraesCS7A02G174900 , TraesCS7B02G079700 , TraesCS7B02G079700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
2 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
3 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
5 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
6 Sobic.008G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
8 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
9 Sobic.004G154200 expressed protein -
10 Sobic.004G027600 expressed protein -
11 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
12 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G189800 ABC1 family domain containing protein, putative, expressed -
14 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
15 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.009G256100 expressed protein -
17 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
18 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -
19 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
20 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase


Gene co-expression network
sample Sobic010G085100 Sobic010G085100 Sobic005G101200 Sobic005G101200 Sobic010G085100--Sobic005G101200 Sobic003G185900 Sobic003G185900 Sobic010G085100--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic010G085100--Sobic007G105500 Sobic002G404800 Sobic002G404800 Sobic010G085100--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic003G036200 Sobic003G036200 Sobic010G085100--Sobic003G036200 Sobic008G033000 Sobic008G033000 Sobic010G085100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic010G085100--Sobic004G154200 Sobic004G189800 Sobic004G189800 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic005G101200--Sobic002G404800 Sobic001G258200 Sobic001G258200 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic005G101200--Sobic010G085100 Sobic004G281800 Sobic004G281800 Sobic005G101200--Sobic004G281800 Sobic003G185900--Sobic008G033000 Sobic001G504400 Sobic001G504400 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic010G067100 Sobic010G067100 Sobic003G185900--Sobic010G067100 Sobic003G185900--Sobic007G105500 Sobic003G185900--Sobic004G215800 Sobic003G185900--Sobic005G068700 Sobic009G038701 Sobic009G038701 Sobic003G185900--Sobic009G038701 Sobic003G185900--Sobic003G036200 Sobic007G105500--Sobic004G215800 Sobic007G105500--Sobic003G036200 Sobic007G105500--Sobic002G404800 Sobic007G105500--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic007G105500--Sobic003G367500 Sobic007G105500--Sobic005G101200 Sobic009G256100 Sobic009G256100 Sobic007G105500--Sobic009G256100 Sobic007G105500--Sobic008G033000 Sobic007G105500--Sobic010G085100 Sobic002G404800--Sobic007G105500 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic002G404800--Sobic005G101200 Sobic002G390100 Sobic002G390100 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic002G404800--Sobic004G112100 Sobic004G215800--Sobic007G105500 Sobic004G215800--Sobic003G036200 Sobic004G215800--Sobic003G185900 Sobic004G215800--Sobic003G367500 Sobic004G215800--Sobic002G404800 Sobic004G215800--Sobic008G033000 Sobic004G215800--Sobic009G256100 Sobic003G097600 Sobic003G097600 Sobic004G215800--Sobic003G097600 Sobic004G215800--Sobic004G112100 Sobic008G140200--Sobic010G085100 Sobic008G140200--Sobic004G112100 Sobic008G140200--Sobic002G404800 Sobic008G140200--Sobic004G215800 Sobic006G153400 Sobic006G153400 Sobic008G140200--Sobic006G153400 Sobic009G048900 Sobic009G048900 Sobic008G140200--Sobic009G048900 Sobic001G134100 Sobic001G134100 Sobic008G140200--Sobic001G134100 Sobic008G140200--Sobic009G256100 Sobic010G104800 Sobic010G104800 Sobic008G140200--Sobic010G104800 Sobic003G036200--Sobic007G105500 Sobic003G036200--Sobic004G215800 Sobic003G036200--Sobic002G390100 Sobic003G036200--Sobic002G404800 Sobic003G036200--Sobic003G185900 Sobic003G036200--Sobic005G101200 Sobic003G036200--Sobic010G085100 Sobic003G036200--Sobic009G256100 Sobic008G033200 Sobic008G033200 Sobic003G036200--Sobic008G033200 Sobic008G033000--Sobic003G185900 Sobic008G129900 Sobic008G129900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic001G217900 Sobic001G217900 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic002G206300 Sobic002G206300 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701 Sobic004G154200--Sobic003G367500 Sobic004G154200--Sobic003G185900 Sobic003G398800 Sobic003G398800 Sobic004G154200--Sobic003G398800 Sobic004G154200--Sobic007G105500 Sobic004G154200--Sobic010G067100 Sobic005G231500 Sobic005G231500 Sobic004G154200--Sobic005G231500 Sobic004G154200--Sobic010G085100 Sobic003G127800 Sobic003G127800 Sobic004G154200--Sobic003G127800 Sobic001G329400 Sobic001G329400 Sobic004G154200--Sobic001G329400
Octagon: transcription factors


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