Gene annotation
Transcriptome id Sobic.001G258200.2,Sobic.001G258200.1
Synonym Sb01g023200
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5WN63
Pfam PF00149
Panther DB PTHR11668 PTHR11668:SF267
NCBI CDD KOG0374; Serine/threonine specific protein phosphatase PP1, catalytic subunit
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT1G07010 : Calcineurin-like metallo-phosphoesterase superfamily protein
RAP-DB (Rice) LOC_Os10g25430.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007044
Brachypodium KQJ96584 , KQJ96585 , KQJ96583
Barley HORVU6Hr1G031370.18 , HORVU6Hr1G031370.19 , HORVU6Hr1G031370.14 , HORVU6Hr1G031370.15 , HORVU6Hr1G031370.16 , HORVU6Hr1G031370.17 , HORVU6Hr1G031370.10 , HORVU6Hr1G031370.11 , HORVU6Hr1G031370.12 , HORVU6Hr1G031370.13 , HORVU6Hr1G031370.8 , HORVU6Hr1G031370.6 , HORVU6Hr1G031370.7 , HORVU6Hr1G031370.5 , HORVU6Hr1G031370.2 , HORVU6Hr1G031370.3 , HORVU6Hr1G031370.1 , HORVU6Hr1G031370.9 , HORVU6Hr1G031370.20 , HORVU6Hr1G031370.23 , HORVU6Hr1G031370.22 , HORVU6Hr1G031370.25 , HORVU6Hr1G031370.24 , HORVU6Hr1G031370.27 , HORVU6Hr1G031370.26 , HORVU6Hr1G031370.21
Wheat TraesCS6D02G144700 , TraesCS6A02G154800 , TraesCS6B02G182800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
2 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
3 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G504400 expressed protein -
5 Sobic.004G189800 ABC1 family domain containing protein, putative, expressed -
6 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
7 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
8 Sobic.001G359300 cytochrome P450, putative, expressed -
9 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
10 Sobic.009G038701 - -
11 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
12 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
13 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
14 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
15 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
18 Sobic.001G077300 thioredoxin, putative, expressed -
19 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
20 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant


Gene co-expression network
sample Sobic001G258200 Sobic001G258200 Sobic003G185900 Sobic003G185900 Sobic001G258200--Sobic003G185900 Sobic002G382700 Sobic002G382700 Sobic001G258200--Sobic002G382700 Sobic008G129900 Sobic008G129900 Sobic001G258200--Sobic008G129900 Sobic001G504400 Sobic001G504400 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic008G033000 Sobic008G033000 Sobic001G258200--Sobic008G033000 Sobic002G206300 Sobic002G206300 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic005G068700 Sobic005G068700 Sobic001G258200--Sobic005G068700 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic010G067100 Sobic010G067100 Sobic003G185900--Sobic010G067100 Sobic007G105500 Sobic007G105500 Sobic003G185900--Sobic007G105500 Sobic004G215800 Sobic004G215800 Sobic003G185900--Sobic004G215800 Sobic003G185900--Sobic005G068700 Sobic009G038701 Sobic009G038701 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic003G341300 Sobic003G341300 Sobic002G382700--Sobic003G341300 Sobic001G283100 Sobic001G283100 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic010G231300 Sobic010G231300 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic001G217900 Sobic001G217900 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300 Sobic001G504400--Sobic002G206300 Sobic007G103400 Sobic007G103400 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic005G101200 Sobic005G101200 Sobic004G189800--Sobic005G101200 Sobic004G189800--Sobic001G258200 Sobic004G027600 Sobic004G027600 Sobic004G189800--Sobic004G027600 Sobic009G256100 Sobic009G256100 Sobic004G189800--Sobic009G256100 Sobic004G189800--Sobic003G185900 Sobic004G189800--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic004G189800--Sobic002G404800 Sobic004G189800--Sobic002G382700 Sobic004G189800--Sobic008G033000 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic009G207900 Sobic009G207900 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic002G206300--Sobic008G129900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300 Sobic001G359300--Sobic001G077300 Sobic001G359300--Sobic001G258200 Sobic009G093100 Sobic009G093100 Sobic001G359300--Sobic009G093100 Sobic001G333800 Sobic001G333800 Sobic001G359300--Sobic001G333800 Sobic001G359300--Sobic002G382700 Sobic009G073900 Sobic009G073900 Sobic001G359300--Sobic009G073900 Sobic003G073800 Sobic003G073800 Sobic001G359300--Sobic003G073800 Sobic001G359300--Sobic006G090100 Sobic001G359300--Sobic005G068700 Sobic005G068700--Sobic001G258200 Sobic005G068700--Sobic005G101200 Sobic005G068700--Sobic003G185900 Sobic002G056500 Sobic002G056500 Sobic005G068700--Sobic002G056500 Sobic005G068700--Sobic008G129900 Sobic005G068700--Sobic008G033000 Sobic005G068700--Sobic001G217900 Sobic002G390100 Sobic002G390100 Sobic005G068700--Sobic002G390100 Sobic005G068700--Sobic002G206300
Octagon: transcription factors


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