Gene annotation
Transcriptome id Sobic.003G342100.1
Synonym Sb03g038620
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
dihydroflavonol-4-reductase, putative, expressed
UniProt C5XNX7
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF349
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT5G58490 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os01g61230.1 : dihydroflavonol-4-reductase, putative, expressed
MaizeGDB (Corn) Zm00025a027011
Brachypodium PNT73126
Barley HORVU3Hr1G088020.3 , HORVU3Hr1G088020.2 , HORVU3Hr1G088020.1 , HORVU3Hr1G088020.7 , HORVU3Hr1G088020.6 , HORVU3Hr1G088020.5 , HORVU3Hr1G088020.4
Wheat TraesCS3D02G342200 , TraesCS3D02G342200 , TraesCS3B02G380500 , TraesCS3B02G380600 , TraesCS3D02G342500 , TraesCS3A02G348600
Populus -


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cDNA sequences
Sobic.003G342100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
2 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
3 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
4 Sobic.009G242100 chloroplast unusual positioning protein, putative, expressed -
5 Sobic.005G045000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
6 Sobic.003G426700 expressed protein -
7 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
8 Sobic.006G064100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
9 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
11 Sobic.005G144300 phospholipase, patatin family, putative, expressed -
12 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
13 Sobic.002G403600 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@rhythmically expressed gene 2 protein, putative, expressed -
14 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
15 Sobic.008G047000 actin, putative, expressed K10355: actin, other eukaryote
16 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
17 Sobic.008G117000 expressed protein K13457: RPM1, disease resistance protein RPM1
18 Sobic.009G123900 L1P family of ribosomal proteins domain containing protein, expressed K02863: RP-L1, MRPL1, large subunit ribosomal protein L1
19 Sobic.001G468700 expressed protein -
20 Sobic.008G033200 stem-specific protein TSJT1, putative, expressed -


Gene co-expression network
sample Sobic003G342100 Sobic003G342100 Sobic001G073900 Sobic001G073900 Sobic003G342100--Sobic001G073900 Sobic001G062900 Sobic001G062900 Sobic003G342100--Sobic001G062900 Sobic003G332700 Sobic003G332700 Sobic003G342100--Sobic003G332700 Sobic009G242100 Sobic009G242100 Sobic003G342100--Sobic009G242100 Sobic005G045000 Sobic005G045000 Sobic003G342100--Sobic005G045000 Sobic003G426700 Sobic003G426700 Sobic003G342100--Sobic003G426700 Sobic001G531500 Sobic001G531500 Sobic003G342100--Sobic001G531500 Sobic006G064100 Sobic006G064100 Sobic003G342100--Sobic006G064100 Sobic002G049600 Sobic002G049600 Sobic003G342100--Sobic002G049600 Sobic001G073900--Sobic003G332700 Sobic008G001900 Sobic008G001900 Sobic001G073900--Sobic008G001900 Sobic008G117000 Sobic008G117000 Sobic001G073900--Sobic008G117000 Sobic001G073900--Sobic003G342100 Sobic001G065600 Sobic001G065600 Sobic001G073900--Sobic001G065600 Sobic001G073900--Sobic001G531500 Sobic005G001700 Sobic005G001700 Sobic001G073900--Sobic005G001700 Sobic004G235600 Sobic004G235600 Sobic001G073900--Sobic004G235600 Sobic001G073900--Sobic002G049600 Sobic007G090403 Sobic007G090403 Sobic001G062900--Sobic007G090403 Sobic001G062900--Sobic003G342100 Sobic009G215500 Sobic009G215500 Sobic001G062900--Sobic009G215500 Sobic001G062900--Sobic001G073900 Sobic001G530900 Sobic001G530900 Sobic001G062900--Sobic001G530900 Sobic001G062900--Sobic001G531500 Sobic001G062900--Sobic003G332700 Sobic001G105200 Sobic001G105200 Sobic001G062900--Sobic001G105200 Sobic001G062900--Sobic005G001700 Sobic003G332700--Sobic001G073900 Sobic003G332700--Sobic008G001900 Sobic003G332700--Sobic008G117000 Sobic003G332700--Sobic001G530900 Sobic003G332700--Sobic004G235600 Sobic003G332700--Sobic001G531500 Sobic003G442700 Sobic003G442700 Sobic003G332700--Sobic003G442700 Sobic010G085100 Sobic010G085100 Sobic003G332700--Sobic010G085100 Sobic005G118400 Sobic005G118400 Sobic003G332700--Sobic005G118400 Sobic009G242100--Sobic008G117000 Sobic003G036200 Sobic003G036200 Sobic009G242100--Sobic003G036200 Sobic009G242100--Sobic003G342100 Sobic009G242100--Sobic001G073900 Sobic009G242100--Sobic002G049600 Sobic007G105500 Sobic007G105500 Sobic009G242100--Sobic007G105500 Sobic009G242100--Sobic003G332700 Sobic001G134100 Sobic001G134100 Sobic009G242100--Sobic001G134100 Sobic010G255300 Sobic010G255300 Sobic009G242100--Sobic010G255300 Sobic003G313300 Sobic003G313300 Sobic005G045000--Sobic003G313300 Sobic001G305600 Sobic001G305600 Sobic005G045000--Sobic001G305600 Sobic001G468700 Sobic001G468700 Sobic005G045000--Sobic001G468700 Sobic003G017100 Sobic003G017100 Sobic005G045000--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic005G045000--Sobic004G028500 Sobic003G191700 Sobic003G191700 Sobic005G045000--Sobic003G191700 Sobic004G347800 Sobic004G347800 Sobic005G045000--Sobic004G347800 Sobic008G151100 Sobic008G151100 Sobic005G045000--Sobic008G151100 Sobic008G168300 Sobic008G168300 Sobic005G045000--Sobic008G168300 Sobic003G426700--Sobic002G049600 Sobic003G426700--Sobic003G342100 Sobic003G426700--Sobic001G062900 Sobic003G426700--Sobic001G105200 Sobic003G426700--Sobic006G064100 Sobic003G426700--Sobic001G073900 Sobic008G033200 Sobic008G033200 Sobic003G426700--Sobic008G033200 Sobic010G205100 Sobic010G205100 Sobic003G426700--Sobic010G205100 Sobic002G232200 Sobic002G232200 Sobic003G426700--Sobic002G232200 Sobic002G118200 Sobic002G118200 Sobic001G531500--Sobic002G118200 Sobic001G531500--Sobic006G064100 Sobic002G403600 Sobic002G403600 Sobic001G531500--Sobic002G403600 Sobic001G531500--Sobic001G073900 Sobic001G531500--Sobic010G205100 Sobic009G123900 Sobic009G123900 Sobic001G531500--Sobic009G123900 Sobic001G531500--Sobic005G001700 Sobic001G531500--Sobic008G001900 Sobic001G531500--Sobic003G332700 Sobic006G064100--Sobic010G205100 Sobic006G064100--Sobic001G531500 Sobic006G064100--Sobic002G403600 Sobic006G064100--Sobic001G073900 Sobic006G120500 Sobic006G120500 Sobic006G064100--Sobic006G120500 Sobic004G317500 Sobic004G317500 Sobic006G064100--Sobic004G317500 Sobic006G064100--Sobic001G305600 Sobic006G064100--Sobic003G036200 Sobic006G064100--Sobic010G085100 Sobic002G049600--Sobic001G073900 Sobic002G049600--Sobic008G033200 Sobic002G049600--Sobic008G117000 Sobic002G049600--Sobic003G036200 Sobic002G049600--Sobic003G332700 Sobic002G049600--Sobic003G426700 Sobic001G261408 Sobic001G261408 Sobic002G049600--Sobic001G261408 Sobic002G049600--Sobic009G242100 Sobic002G049600--Sobic003G342100
Octagon: transcription factors


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