Gene annotation
Transcriptome id Sobic.005G001700.1
Synonym Sb05g000330
Functional annotation mitochondrial substrate carrier family protein, putative, expressed
UniProt A0A1B6PPF4
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF300
NCBI CDD KOG0768; Mitochondrial carrier protein PET8
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35800 : mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os11g01270.1 : mitochondrial substrate carrier family protein, putative, expressed
MaizeGDB (Corn) Zm00025a013230 , Zm00025a028911 , Zm00025a038166 , Zm00025a031478
Brachypodium KQJ92677 , KQJ92678
Barley HORVU5Hr1G048510.4 , HORVU5Hr1G048510.1 , HORVU5Hr1G048510.3 , HORVU5Hr1G048510.2
Wheat TraesCS5A02G155300 , TraesCS5A02G155300 , TraesCS5D02G160400 , TraesCS5B02G153600 , TraesCS5B02G153600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
2 Sobic.002G220900 expressed protein -
3 Sobic.005G204200 peptide chain release factor protein, putative, expressed K02835: prfA, MTRF1, peptide chain release factor 1
4 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
5 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -
6 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
7 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
8 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
9 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
10 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
11 Sobic.001G183000 peptidase M50 family protein, putative, expressed -
12 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.001G504400 expressed protein -
14 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
15 Sobic.006G101500 expressed protein -
16 Sobic.003G085100 MYB family transcription factor, putative, expressed -
17 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
18 Sobic.003G233700 SET domain-containing protein, putative, expressed -
19 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
20 Sobic.003G398800 expressed protein -


Gene co-expression network
sample Sobic005G001700 Sobic005G001700 Sobic008G001900 Sobic008G001900 Sobic005G001700--Sobic008G001900 Sobic002G220900 Sobic002G220900 Sobic005G001700--Sobic002G220900 Sobic005G204200 Sobic005G204200 Sobic005G001700--Sobic005G204200 Sobic010G067100 Sobic010G067100 Sobic005G001700--Sobic010G067100 Sobic005G063000 Sobic005G063000 Sobic005G001700--Sobic005G063000 Sobic003G185900 Sobic003G185900 Sobic005G001700--Sobic003G185900 Sobic002G402700 Sobic002G402700 Sobic005G001700--Sobic002G402700 Sobic003G036200 Sobic003G036200 Sobic005G001700--Sobic003G036200 Sobic007G009200 Sobic007G009200 Sobic005G001700--Sobic007G009200 Sobic008G001900--Sobic005G001700 Sobic001G073900 Sobic001G073900 Sobic008G001900--Sobic001G073900 Sobic004G235600 Sobic004G235600 Sobic008G001900--Sobic004G235600 Sobic003G085100 Sobic003G085100 Sobic008G001900--Sobic003G085100 Sobic003G332700 Sobic003G332700 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic008G001900--Sobic005G063000 Sobic008G001900--Sobic005G204200 Sobic001G465700 Sobic001G465700 Sobic008G001900--Sobic001G465700 Sobic003G398800 Sobic003G398800 Sobic002G220900--Sobic003G398800 Sobic008G033000 Sobic008G033000 Sobic002G220900--Sobic008G033000 Sobic007G103400 Sobic007G103400 Sobic002G220900--Sobic007G103400 Sobic001G504400 Sobic001G504400 Sobic002G220900--Sobic001G504400 Sobic002G220900--Sobic007G009200 Sobic009G237100 Sobic009G237100 Sobic002G220900--Sobic009G237100 Sobic002G220900--Sobic003G185900 Sobic002G220900--Sobic005G204200 Sobic010G035400 Sobic010G035400 Sobic002G220900--Sobic010G035400 Sobic003G160800 Sobic003G160800 Sobic005G204200--Sobic003G160800 Sobic005G204200--Sobic005G063000 Sobic005G204200--Sobic002G220900 Sobic005G204200--Sobic005G001700 Sobic003G233700 Sobic003G233700 Sobic005G204200--Sobic003G233700 Sobic005G204200--Sobic010G035400 Sobic005G204200--Sobic007G103400 Sobic005G204200--Sobic003G085100 Sobic004G336200 Sobic004G336200 Sobic005G204200--Sobic004G336200 Sobic010G067100--Sobic003G185900 Sobic010G067100--Sobic001G504400 Sobic010G067100--Sobic003G398800 Sobic001G258200 Sobic001G258200 Sobic010G067100--Sobic001G258200 Sobic007G105500 Sobic007G105500 Sobic010G067100--Sobic007G105500 Sobic006G158100 Sobic006G158100 Sobic010G067100--Sobic006G158100 Sobic002G206300 Sobic002G206300 Sobic010G067100--Sobic002G206300 Sobic009G038701 Sobic009G038701 Sobic010G067100--Sobic009G038701 Sobic010G067100--Sobic008G033000 Sobic004G211600 Sobic004G211600 Sobic005G063000--Sobic004G211600 Sobic005G063000--Sobic005G204200 Sobic009G121000 Sobic009G121000 Sobic005G063000--Sobic009G121000 Sobic005G063000--Sobic005G001700 Sobic005G063000--Sobic003G085100 Sobic005G063000--Sobic003G160800 Sobic010G214100 Sobic010G214100 Sobic005G063000--Sobic010G214100 Sobic005G063000--Sobic007G103400 Sobic010G043800 Sobic010G043800 Sobic005G063000--Sobic010G043800 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic003G185900--Sobic010G067100 Sobic003G185900--Sobic007G105500 Sobic004G215800 Sobic004G215800 Sobic003G185900--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic003G185900--Sobic005G068700 Sobic003G185900--Sobic009G038701 Sobic003G185900--Sobic003G036200 Sobic002G402700--Sobic008G033000 Sobic008G129900 Sobic008G129900 Sobic002G402700--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G402700--Sobic001G217900 Sobic002G402700--Sobic002G206300 Sobic002G402700--Sobic001G504400 Sobic002G402700--Sobic005G001700 Sobic001G540600 Sobic001G540600 Sobic002G402700--Sobic001G540600 Sobic010G231300 Sobic010G231300 Sobic002G402700--Sobic010G231300 Sobic001G378100 Sobic001G378100 Sobic002G402700--Sobic001G378100 Sobic003G036200--Sobic007G105500 Sobic003G036200--Sobic004G215800 Sobic002G390100 Sobic002G390100 Sobic003G036200--Sobic002G390100 Sobic002G404800 Sobic002G404800 Sobic003G036200--Sobic002G404800 Sobic003G036200--Sobic003G185900 Sobic005G101200 Sobic005G101200 Sobic003G036200--Sobic005G101200 Sobic010G085100 Sobic010G085100 Sobic003G036200--Sobic010G085100 Sobic009G256100 Sobic009G256100 Sobic003G036200--Sobic009G256100 Sobic008G033200 Sobic008G033200 Sobic003G036200--Sobic008G033200 Sobic007G009200--Sobic009G237100 Sobic003G024300 Sobic003G024300 Sobic007G009200--Sobic003G024300 Sobic006G207800 Sobic006G207800 Sobic007G009200--Sobic006G207800 Sobic007G009200--Sobic003G398800 Sobic006G238200 Sobic006G238200 Sobic007G009200--Sobic006G238200 Sobic001G102800 Sobic001G102800 Sobic007G009200--Sobic001G102800 Sobic006G077400 Sobic006G077400 Sobic007G009200--Sobic006G077400 Sobic010G201700 Sobic010G201700 Sobic007G009200--Sobic010G201700 Sobic007G009200--Sobic010G035400
Octagon: transcription factors


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