Gene annotation
Transcriptome id Sobic.003G233700.1
Synonym Sb03g029140
Functional annotation SET domain-containing protein, putative, expressed
UniProt C5XEJ8
Pfam PF09273
Panther DB PTHR13271:SF9 PTHR13271
NCBI CDD KOG1337; N-methyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14260 : Rubisco methyltransferase family protein
RAP-DB (Rice) LOC_Os12g13460.1 : SET domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a028292 , Zm00025a038654
Brachypodium KQJ91765
Barley HORVU5Hr1G033180.4 , HORVU5Hr1G033180.5 , HORVU5Hr1G033180.6 , HORVU5Hr1G033180.7 , HORVU5Hr1G033180.1 , HORVU5Hr1G033180.2 , HORVU5Hr1G033180.3 , HORVU5Hr1G033180.8 , HORVU5Hr1G033180.9 , HORVU5Hr1G033180.16 , HORVU5Hr1G033180.14 , HORVU5Hr1G033180.15 , HORVU5Hr1G033180.12 , HORVU5Hr1G033180.13 , HORVU5Hr1G033180.10 , HORVU5Hr1G033180.11
Wheat TraesCS5A02G106100 , TraesCS5D02G123700 , TraesCS5D02G123700 , TraesCS5B02G110900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G103400 expressed protein -
2 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
3 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
4 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
6 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
7 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
8 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
9 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
10 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
11 Sobic.008G006100 MATE efflux protein, putative, expressed -
12 Sobic.010G035400 expressed protein -
13 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
14 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -
15 Sobic.001G504400 expressed protein -
16 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
17 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
18 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
19 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit


Gene co-expression network
sample Sobic003G233700 Sobic003G233700 Sobic007G103400 Sobic007G103400 Sobic003G233700--Sobic007G103400 Sobic003G287900 Sobic003G287900 Sobic003G233700--Sobic003G287900 Sobic004G353100 Sobic004G353100 Sobic003G233700--Sobic004G353100 Sobic002G133900 Sobic002G133900 Sobic003G233700--Sobic002G133900 Sobic009G237000 Sobic009G237000 Sobic003G233700--Sobic009G237000 Sobic003G160800 Sobic003G160800 Sobic003G233700--Sobic003G160800 Sobic008G074000 Sobic008G074000 Sobic003G233700--Sobic008G074000 Sobic003G094350 Sobic003G094350 Sobic003G233700--Sobic003G094350 Sobic001G500600 Sobic001G500600 Sobic003G233700--Sobic001G500600 Sobic007G103400--Sobic009G237000 Sobic002G298800 Sobic002G298800 Sobic007G103400--Sobic002G298800 Sobic007G103400--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic007G103400--Sobic010G035400 Sobic001G504400 Sobic001G504400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300 Sobic003G070900 Sobic003G070900 Sobic003G287900--Sobic003G070900 Sobic003G287900--Sobic002G133900 Sobic003G287900--Sobic003G094350 Sobic003G287900--Sobic003G233700 Sobic003G287900--Sobic001G500600 Sobic003G287900--Sobic004G353100 Sobic004G336200 Sobic004G336200 Sobic003G287900--Sobic004G336200 Sobic003G287900--Sobic008G074000 Sobic009G170200 Sobic009G170200 Sobic003G287900--Sobic009G170200 Sobic004G353100--Sobic007G103400 Sobic004G353100--Sobic009G237000 Sobic004G353100--Sobic002G133900 Sobic004G353100--Sobic002G298800 Sobic004G353100--Sobic010G035400 Sobic004G353100--Sobic003G070900 Sobic004G353100--Sobic003G233700 Sobic009G132000 Sobic009G132000 Sobic004G353100--Sobic009G132000 Sobic004G353100--Sobic009G170200 Sobic002G133900--Sobic003G070900 Sobic002G133900--Sobic003G094350 Sobic002G133900--Sobic003G287900 Sobic002G405100 Sobic002G405100 Sobic002G133900--Sobic002G405100 Sobic002G133900--Sobic004G353100 Sobic005G100300 Sobic005G100300 Sobic002G133900--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic002G133900--Sobic002G028400 Sobic002G133900--Sobic007G103400 Sobic002G133900--Sobic009G170200 Sobic009G237000--Sobic007G103400 Sobic009G237000--Sobic004G353100 Sobic006G102000 Sobic006G102000 Sobic009G237000--Sobic006G102000 Sobic009G237000--Sobic002G298800 Sobic009G237000--Sobic010G035400 Sobic009G237000--Sobic001G504400 Sobic009G237000--Sobic003G233700 Sobic007G108900 Sobic007G108900 Sobic009G237000--Sobic007G108900 Sobic009G237000--Sobic008G074000 Sobic003G160800--Sobic004G336200 Sobic003G160800--Sobic005G100300 Sobic003G160800--Sobic010G035400 Sobic003G387100 Sobic003G387100 Sobic003G160800--Sobic003G387100 Sobic003G160800--Sobic007G103400 Sobic002G112400 Sobic002G112400 Sobic003G160800--Sobic002G112400 Sobic003G160800--Sobic003G233700 Sobic001G134700 Sobic001G134700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic008G074000--Sobic003G070900 Sobic008G074000--Sobic007G103400 Sobic008G074000--Sobic002G133900 Sobic008G074000--Sobic003G233700 Sobic008G074000--Sobic009G237000 Sobic008G074000--Sobic001G504400 Sobic008G074000--Sobic004G353100 Sobic008G074000--Sobic009G170200 Sobic009G219100 Sobic009G219100 Sobic008G074000--Sobic009G219100 Sobic003G094350--Sobic002G133900 Sobic003G094350--Sobic003G070900 Sobic003G094350--Sobic001G500600 Sobic003G094350--Sobic003G287900 Sobic003G094350--Sobic005G100300 Sobic003G094350--Sobic002G028400 Sobic003G094350--Sobic004G336200 Sobic010G002000 Sobic010G002000 Sobic003G094350--Sobic010G002000 Sobic003G094350--Sobic004G353100 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic006G197300 Sobic006G197300 Sobic001G500600--Sobic006G197300 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900
Octagon: transcription factors


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