Gene annotation
Transcriptome id Sobic.003G004200.1
Synonym Sb03g000550
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glutaredoxin, putative, expressed
UniProt A0A1B6Q0Q0
Pfam -
Panther DB PTHR10168 PTHR10168:SF61
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64500 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os01g13480.1 : glutaredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a022796
Brachypodium KQK03477
Barley HORVU3Hr1G057240.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G468700 expressed protein -
2 Sobic.003G009700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.004G028500 pyridoxal biosynthesis protein PDX2, putative, expressed K08681: pdxT, 5'-phosphate synthase pdxT subunit
4 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
5 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
7 Sobic.005G045000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
8 Sobic.005G206300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATA15 protein, putative, expressed -
9 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
10 Sobic.010G255300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
11 Sobic.002G273300 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
12 Sobic.001G239500 starch synthase, putative, expressed K00703: starch synthase
13 Sobic.009G015100 ACT domain containing protein, expressed -
14 Sobic.007G047400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@MYB family transcription factor, putative, expressed K12133: MYB-related transcription factor LHY
15 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G093800 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
18 Sobic.009G249600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcriptional regulator, putative, expressed K07735: putative transcriptional regulator
19 Sobic.005G231500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
20 Sobic.001G158900 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4


Gene co-expression network
sample Sobic003G004200 Sobic003G004200 Sobic001G468700 Sobic001G468700 Sobic003G004200--Sobic001G468700 Sobic003G009700 Sobic003G009700 Sobic003G004200--Sobic003G009700 Sobic004G028500 Sobic004G028500 Sobic003G004200--Sobic004G028500 Sobic001G065600 Sobic001G065600 Sobic003G004200--Sobic001G065600 Sobic004G356400 Sobic004G356400 Sobic003G004200--Sobic004G356400 Sobic003G313300 Sobic003G313300 Sobic003G004200--Sobic003G313300 Sobic005G045000 Sobic005G045000 Sobic003G004200--Sobic005G045000 Sobic005G206300 Sobic005G206300 Sobic003G004200--Sobic005G206300 Sobic001G017300 Sobic001G017300 Sobic003G004200--Sobic001G017300 Sobic010G002700 Sobic010G002700 Sobic001G468700--Sobic010G002700 Sobic003G017100 Sobic003G017100 Sobic001G468700--Sobic003G017100 Sobic001G468700--Sobic004G028500 Sobic001G468700--Sobic001G017300 Sobic009G121000 Sobic009G121000 Sobic001G468700--Sobic009G121000 Sobic003G247400 Sobic003G247400 Sobic001G468700--Sobic003G247400 Sobic001G468700--Sobic003G313300 Sobic003G276300 Sobic003G276300 Sobic001G468700--Sobic003G276300 Sobic001G468700--Sobic003G004200 Sobic006G225200 Sobic006G225200 Sobic003G009700--Sobic006G225200 Sobic003G009700--Sobic003G004200 Sobic009G249600 Sobic009G249600 Sobic003G009700--Sobic009G249600 Sobic002G273300 Sobic002G273300 Sobic003G009700--Sobic002G273300 Sobic004G327700 Sobic004G327700 Sobic003G009700--Sobic004G327700 Sobic003G009700--Sobic005G045000 Sobic001G484800 Sobic001G484800 Sobic003G009700--Sobic001G484800 Sobic001G239500 Sobic001G239500 Sobic003G009700--Sobic001G239500 Sobic001G207700 Sobic001G207700 Sobic003G009700--Sobic001G207700 Sobic004G028500--Sobic001G468700 Sobic004G028500--Sobic003G313300 Sobic001G100100 Sobic001G100100 Sobic004G028500--Sobic001G100100 Sobic004G028500--Sobic003G017100 Sobic004G028500--Sobic010G002700 Sobic004G028500--Sobic005G045000 Sobic002G006600 Sobic002G006600 Sobic004G028500--Sobic002G006600 Sobic004G028500--Sobic003G004200 Sobic001G198100 Sobic001G198100 Sobic004G028500--Sobic001G198100 Sobic001G158900 Sobic001G158900 Sobic001G065600--Sobic001G158900 Sobic001G073900 Sobic001G073900 Sobic001G065600--Sobic001G073900 Sobic005G188600 Sobic005G188600 Sobic001G065600--Sobic005G188600 Sobic006G010900 Sobic006G010900 Sobic001G065600--Sobic006G010900 Sobic008G094000 Sobic008G094000 Sobic001G065600--Sobic008G094000 Sobic001G484400 Sobic001G484400 Sobic001G065600--Sobic001G484400 Sobic002G036000 Sobic002G036000 Sobic001G065600--Sobic002G036000 Sobic001G003200 Sobic001G003200 Sobic001G065600--Sobic001G003200 Sobic003G003600 Sobic003G003600 Sobic001G065600--Sobic003G003600 Sobic004G356400--Sobic001G017300 Sobic005G101200 Sobic005G101200 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic001G258200 Sobic001G258200 Sobic004G356400--Sobic001G258200 Sobic003G313300--Sobic003G017100 Sobic003G191700 Sobic003G191700 Sobic003G313300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G313300--Sobic010G176200 Sobic007G047400 Sobic007G047400 Sobic003G313300--Sobic007G047400 Sobic003G313300--Sobic004G028500 Sobic003G313300--Sobic001G017300 Sobic003G313300--Sobic001G468700 Sobic003G313300--Sobic010G002700 Sobic003G313300--Sobic005G206300 Sobic005G045000--Sobic003G313300 Sobic001G305600 Sobic001G305600 Sobic005G045000--Sobic001G305600 Sobic005G045000--Sobic001G468700 Sobic005G045000--Sobic003G017100 Sobic005G045000--Sobic004G028500 Sobic005G045000--Sobic003G191700 Sobic004G347800 Sobic004G347800 Sobic005G045000--Sobic004G347800 Sobic008G151100 Sobic008G151100 Sobic005G045000--Sobic008G151100 Sobic008G168300 Sobic008G168300 Sobic005G045000--Sobic008G168300 Sobic005G231500 Sobic005G231500 Sobic005G206300--Sobic005G231500 Sobic005G206300--Sobic004G356400 Sobic005G206300--Sobic001G017300 Sobic003G391200 Sobic003G391200 Sobic005G206300--Sobic003G391200 Sobic005G206300--Sobic005G101200 Sobic009G015100 Sobic009G015100 Sobic005G206300--Sobic009G015100 Sobic004G154200 Sobic004G154200 Sobic005G206300--Sobic004G154200 Sobic010G249700 Sobic010G249700 Sobic005G206300--Sobic010G249700 Sobic005G206300--Sobic003G313300 Sobic001G017300--Sobic006G158100 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic001G017300--Sobic010G249700 Sobic007G136200 Sobic007G136200 Sobic001G017300--Sobic007G136200 Sobic001G017300--Sobic003G276300 Sobic001G017300--Sobic005G101200 Sobic001G169900 Sobic001G169900 Sobic001G017300--Sobic001G169900 Sobic001G017300--Sobic010G002700
Octagon: transcription factors


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