Gene annotation
Transcriptome id Sobic.006G093800.1
Synonym GRAS2, SCL14, ATGRAS2, Sb06g017860
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1Z5RDS5
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os11g47870.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
2 Sobic.010G249700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -
5 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
6 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
7 Sobic.004G189800 ABC1 family domain containing protein, putative, expressed -
8 Sobic.004G027600 expressed protein -
9 Sobic.007G136200 expressed protein -
10 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
11 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
12 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
13 Sobic.001G468700 expressed protein -
14 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
15 Sobic.010G039500 genetic modifier, putative, expressed -
16 Sobic.003G021100 expressed protein -
17 Sobic.001G178250 - -
18 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.009G256100 expressed protein -
20 Sobic.003G276300 zinc knuckle domain containing protein, expressed -


Gene co-expression network
sample Sobic006G093800 Sobic006G093800 Sobic001G017300 Sobic001G017300 Sobic006G093800--Sobic001G017300 Sobic010G249700 Sobic010G249700 Sobic006G093800--Sobic010G249700 Sobic004G356400 Sobic004G356400 Sobic006G093800--Sobic004G356400 Sobic001G134100 Sobic001G134100 Sobic006G093800--Sobic001G134100 Sobic005G101200 Sobic005G101200 Sobic006G093800--Sobic005G101200 Sobic010G085100 Sobic010G085100 Sobic006G093800--Sobic010G085100 Sobic004G189800 Sobic004G189800 Sobic006G093800--Sobic004G189800 Sobic004G027600 Sobic004G027600 Sobic006G093800--Sobic004G027600 Sobic007G136200 Sobic007G136200 Sobic006G093800--Sobic007G136200 Sobic006G158100 Sobic006G158100 Sobic001G017300--Sobic006G158100 Sobic001G017300--Sobic004G356400 Sobic001G017300--Sobic006G093800 Sobic001G017300--Sobic010G249700 Sobic001G017300--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic001G017300--Sobic003G276300 Sobic001G017300--Sobic005G101200 Sobic001G169900 Sobic001G169900 Sobic001G017300--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G017300--Sobic010G002700 Sobic010G249700--Sobic001G017300 Sobic010G249700--Sobic005G101200 Sobic007G105500 Sobic007G105500 Sobic010G249700--Sobic007G105500 Sobic010G249700--Sobic006G093800 Sobic009G256100 Sobic009G256100 Sobic010G249700--Sobic009G256100 Sobic010G255300 Sobic010G255300 Sobic010G249700--Sobic010G255300 Sobic003G282000 Sobic003G282000 Sobic010G249700--Sobic003G282000 Sobic002G382700 Sobic002G382700 Sobic010G249700--Sobic002G382700 Sobic010G249700--Sobic004G356400 Sobic004G356400--Sobic001G017300 Sobic004G356400--Sobic005G101200 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G356400--Sobic004G189800 Sobic001G258200 Sobic001G258200 Sobic004G356400--Sobic001G258200 Sobic003G367500 Sobic003G367500 Sobic001G134100--Sobic003G367500 Sobic001G329400 Sobic001G329400 Sobic001G134100--Sobic001G329400 Sobic005G231500 Sobic005G231500 Sobic001G134100--Sobic005G231500 Sobic001G134100--Sobic007G105500 Sobic004G154200 Sobic004G154200 Sobic001G134100--Sobic004G154200 Sobic001G134100--Sobic010G085100 Sobic008G117000 Sobic008G117000 Sobic001G134100--Sobic008G117000 Sobic010G039500 Sobic010G039500 Sobic001G134100--Sobic010G039500 Sobic004G215800 Sobic004G215800 Sobic001G134100--Sobic004G215800 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic005G101200--Sobic010G085100 Sobic004G281800 Sobic004G281800 Sobic005G101200--Sobic004G281800 Sobic010G085100--Sobic005G101200 Sobic010G085100--Sobic003G185900 Sobic010G085100--Sobic007G105500 Sobic010G085100--Sobic002G404800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic003G036200 Sobic003G036200 Sobic010G085100--Sobic003G036200 Sobic008G033000 Sobic008G033000 Sobic010G085100--Sobic008G033000 Sobic010G085100--Sobic004G154200 Sobic004G189800--Sobic005G101200 Sobic004G189800--Sobic001G258200 Sobic004G189800--Sobic004G027600 Sobic004G189800--Sobic009G256100 Sobic004G189800--Sobic003G185900 Sobic004G189800--Sobic005G068700 Sobic004G189800--Sobic002G404800 Sobic004G189800--Sobic002G382700 Sobic004G189800--Sobic008G033000 Sobic004G027600--Sobic004G189800 Sobic004G027600--Sobic003G185900 Sobic010G251700 Sobic010G251700 Sobic004G027600--Sobic010G251700 Sobic004G112100 Sobic004G112100 Sobic004G027600--Sobic004G112100 Sobic004G027600--Sobic009G237100 Sobic010G067100 Sobic010G067100 Sobic004G027600--Sobic010G067100 Sobic004G027600--Sobic010G085100 Sobic004G027600--Sobic001G258200 Sobic004G027600--Sobic005G101200 Sobic007G136200--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100
Octagon: transcription factors


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