Gene annotation
Transcriptome id Sobic.010G176200.2,Sobic.010G176200.3,Sobic.010G176200.1
Synonym Sb10g022810
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A194YJX3 , A0A194YJV4
Pfam PF07343
Panther DB PTHR36318 PTHR36318:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22750 : -
RAP-DB (Rice) LOC_Os06g38320.2,LOC_Os06g38320.3 : expressed protein
MaizeGDB (Corn) Zm00025a051168
Brachypodium -
Barley HORVU7Hr1G086010.11 , HORVU7Hr1G086010.14 , HORVU7Hr1G086010.4 , HORVU7Hr1G086010.5 , HORVU7Hr1G086010.6 , HORVU7Hr1G086010.7 , HORVU7Hr1G086010.12 , HORVU7Hr1G086010.1 , HORVU7Hr1G086010.2 , HORVU7Hr1G086010.3 , HORVU7Hr1G086010.13
Wheat TraesCS7D02G357200 , TraesCS7D02G357200 , TraesCS7D02G357200 , TraesCS7D02G357200
Populus -


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cDNA sequences
Sobic.010G176200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G130000 PPR repeat domain containing protein, putative, expressed -
2 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
3 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
4 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
6 Sobic.003G160200 multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
7 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
8 Sobic.007G123500 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
9 Sobic.001G333800 MYB family transcription factor, putative, expressed -
10 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
11 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
12 Sobic.007G047400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@MYB family transcription factor, putative, expressed K12133: MYB-related transcription factor LHY
13 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
14 Sobic.010G002700 expressed protein -
15 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
16 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
17 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.005G206300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATA15 protein, putative, expressed -
19 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
20 Sobic.003G247500 expressed protein -


Gene co-expression network
sample Sobic010G176200 Sobic010G176200 Sobic008G130000 Sobic008G130000 Sobic010G176200--Sobic008G130000 Sobic003G313300 Sobic003G313300 Sobic010G176200--Sobic003G313300 Sobic004G347800 Sobic004G347800 Sobic010G176200--Sobic004G347800 Sobic004G356400 Sobic004G356400 Sobic010G176200--Sobic004G356400 Sobic003G229300 Sobic003G229300 Sobic010G176200--Sobic003G229300 Sobic003G160200 Sobic003G160200 Sobic010G176200--Sobic003G160200 Sobic001G017300 Sobic001G017300 Sobic010G176200--Sobic001G017300 Sobic007G123500 Sobic007G123500 Sobic010G176200--Sobic007G123500 Sobic001G333800 Sobic001G333800 Sobic010G176200--Sobic001G333800 Sobic008G130000--Sobic010G176200 Sobic008G130000--Sobic004G356400 Sobic008G130000--Sobic003G160200 Sobic003G021100 Sobic003G021100 Sobic008G130000--Sobic003G021100 Sobic010G275700 Sobic010G275700 Sobic008G130000--Sobic010G275700 Sobic001G303200 Sobic001G303200 Sobic008G130000--Sobic001G303200 Sobic001G168250 Sobic001G168250 Sobic008G130000--Sobic001G168250 Sobic008G130000--Sobic003G229300 Sobic008G130000--Sobic001G333800 Sobic003G017100 Sobic003G017100 Sobic003G313300--Sobic003G017100 Sobic003G191700 Sobic003G191700 Sobic003G313300--Sobic003G191700 Sobic003G313300--Sobic010G176200 Sobic007G047400 Sobic007G047400 Sobic003G313300--Sobic007G047400 Sobic004G028500 Sobic004G028500 Sobic003G313300--Sobic004G028500 Sobic003G313300--Sobic001G017300 Sobic001G468700 Sobic001G468700 Sobic003G313300--Sobic001G468700 Sobic010G002700 Sobic010G002700 Sobic003G313300--Sobic010G002700 Sobic005G206300 Sobic005G206300 Sobic003G313300--Sobic005G206300 Sobic004G347800--Sobic010G176200 Sobic004G347800--Sobic003G229300 Sobic001G305600 Sobic001G305600 Sobic004G347800--Sobic001G305600 Sobic004G347800--Sobic008G130000 Sobic004G347800--Sobic004G356400 Sobic005G045000 Sobic005G045000 Sobic004G347800--Sobic005G045000 Sobic004G347800--Sobic003G313300 Sobic004G347800--Sobic003G021100 Sobic006G093800 Sobic006G093800 Sobic004G347800--Sobic006G093800 Sobic004G356400--Sobic001G017300 Sobic005G101200 Sobic005G101200 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic004G356400--Sobic007G105500 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic001G258200 Sobic001G258200 Sobic004G356400--Sobic001G258200 Sobic003G229300--Sobic003G191700 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic004G042200 Sobic004G042200 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic008G115900 Sobic008G115900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic003G160200--Sobic001G168250 Sobic003G160200--Sobic010G176200 Sobic003G160200--Sobic008G130000 Sobic003G160200--Sobic007G123500 Sobic009G113800 Sobic009G113800 Sobic003G160200--Sobic009G113800 Sobic002G193800 Sobic002G193800 Sobic003G160200--Sobic002G193800 Sobic003G160200--Sobic008G115900 Sobic003G160200--Sobic009G237100 Sobic003G160200--Sobic004G356400 Sobic001G017300--Sobic006G158100 Sobic001G017300--Sobic004G356400 Sobic001G017300--Sobic006G093800 Sobic010G249700 Sobic010G249700 Sobic001G017300--Sobic010G249700 Sobic007G136200 Sobic007G136200 Sobic001G017300--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic001G017300--Sobic003G276300 Sobic001G017300--Sobic005G101200 Sobic001G017300--Sobic001G169900 Sobic001G017300--Sobic010G002700 Sobic004G120100 Sobic004G120100 Sobic007G123500--Sobic004G120100 Sobic007G123500--Sobic003G160200 Sobic007G123500--Sobic008G115900 Sobic007G123500--Sobic010G176200 Sobic005G084500 Sobic005G084500 Sobic007G123500--Sobic005G084500 Sobic007G123500--Sobic008G130000 Sobic007G123500--Sobic007G136200 Sobic001G516901 Sobic001G516901 Sobic007G123500--Sobic001G516901 Sobic007G123500--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic001G333800--Sobic001G359300 Sobic005G106600 Sobic005G106600 Sobic001G333800--Sobic005G106600 Sobic009G093100 Sobic009G093100 Sobic001G333800--Sobic009G093100 Sobic006G090100 Sobic006G090100 Sobic001G333800--Sobic006G090100 Sobic001G333800--Sobic001G303200 Sobic003G220100 Sobic003G220100 Sobic001G333800--Sobic003G220100 Sobic009G038900 Sobic009G038900 Sobic001G333800--Sobic009G038900 Sobic009G073900 Sobic009G073900 Sobic001G333800--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic001G333800--Sobic001G077300
Octagon: transcription factors


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