Gene annotation
Transcriptome id Sobic.008G130000.1
Synonym GUN1, Sb08g018230
Functional annotation PPR repeat domain containing protein, putative, expressed
UniProt C5YPS3
Pfam PF13812 PF13041
Panther DB PTHR24015 PTHR24015:SF882
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31400 : genomes uncoupled 1
RAP-DB (Rice) LOC_Os12g37550.1 : PPR repeat domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a004152 , Zm00025a004151
Brachypodium KQJ86279
Barley HORVU5Hr1G022350.2 , HORVU5Hr1G022350.1
Wheat TraesCS5A02G085800 , TraesCS5D02G097800 , TraesCS5B02G091600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G160200 multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
4 Sobic.003G021100 expressed protein -
5 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
6 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
7 Sobic.001G168250 - -
8 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
9 Sobic.001G333800 MYB family transcription factor, putative, expressed -
10 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
11 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
12 Sobic.007G123500 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
13 Sobic.007G136200 expressed protein -
14 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
15 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
16 Sobic.002G193800 transporter family protein, putative, expressed -
17 Sobic.003G166200 expressed protein -
18 Sobic.010G219600 protein kinase domain containing protein, expressed -
19 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
20 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase


Gene co-expression network
sample Sobic008G130000 Sobic008G130000 Sobic010G176200 Sobic010G176200 Sobic008G130000--Sobic010G176200 Sobic004G356400 Sobic004G356400 Sobic008G130000--Sobic004G356400 Sobic003G160200 Sobic003G160200 Sobic008G130000--Sobic003G160200 Sobic003G021100 Sobic003G021100 Sobic008G130000--Sobic003G021100 Sobic010G275700 Sobic010G275700 Sobic008G130000--Sobic010G275700 Sobic001G303200 Sobic001G303200 Sobic008G130000--Sobic001G303200 Sobic001G168250 Sobic001G168250 Sobic008G130000--Sobic001G168250 Sobic003G229300 Sobic003G229300 Sobic008G130000--Sobic003G229300 Sobic001G333800 Sobic001G333800 Sobic008G130000--Sobic001G333800 Sobic010G176200--Sobic008G130000 Sobic003G313300 Sobic003G313300 Sobic010G176200--Sobic003G313300 Sobic004G347800 Sobic004G347800 Sobic010G176200--Sobic004G347800 Sobic010G176200--Sobic004G356400 Sobic010G176200--Sobic003G229300 Sobic010G176200--Sobic003G160200 Sobic001G017300 Sobic001G017300 Sobic010G176200--Sobic001G017300 Sobic007G123500 Sobic007G123500 Sobic010G176200--Sobic007G123500 Sobic010G176200--Sobic001G333800 Sobic004G356400--Sobic001G017300 Sobic005G101200 Sobic005G101200 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic004G356400--Sobic007G105500 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic001G258200 Sobic001G258200 Sobic004G356400--Sobic001G258200 Sobic003G160200--Sobic001G168250 Sobic003G160200--Sobic010G176200 Sobic003G160200--Sobic008G130000 Sobic003G160200--Sobic007G123500 Sobic009G113800 Sobic009G113800 Sobic003G160200--Sobic009G113800 Sobic002G193800 Sobic002G193800 Sobic003G160200--Sobic002G193800 Sobic008G115900 Sobic008G115900 Sobic003G160200--Sobic008G115900 Sobic003G160200--Sobic009G237100 Sobic003G160200--Sobic004G356400 Sobic003G021100--Sobic010G275700 Sobic003G021100--Sobic005G101200 Sobic004G281800 Sobic004G281800 Sobic003G021100--Sobic004G281800 Sobic003G021100--Sobic004G189800 Sobic009G038900 Sobic009G038900 Sobic003G021100--Sobic009G038900 Sobic010G251700 Sobic010G251700 Sobic003G021100--Sobic010G251700 Sobic010G085100 Sobic010G085100 Sobic003G021100--Sobic010G085100 Sobic004G027600 Sobic004G027600 Sobic003G021100--Sobic004G027600 Sobic003G021100--Sobic008G130000 Sobic010G275700--Sobic003G021100 Sobic010G275700--Sobic005G101200 Sobic010G275700--Sobic004G281800 Sobic001G352400 Sobic001G352400 Sobic010G275700--Sobic001G352400 Sobic010G275700--Sobic004G189800 Sobic002G382700 Sobic002G382700 Sobic010G275700--Sobic002G382700 Sobic010G275700--Sobic001G333800 Sobic002G119100 Sobic002G119100 Sobic010G275700--Sobic002G119100 Sobic010G275700--Sobic009G038900 Sobic001G283100 Sobic001G283100 Sobic001G303200--Sobic001G283100 Sobic001G303200--Sobic002G382700 Sobic001G303200--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic001G303200--Sobic001G207800 Sobic006G102000 Sobic006G102000 Sobic001G303200--Sobic006G102000 Sobic007G108900 Sobic007G108900 Sobic001G303200--Sobic007G108900 Sobic006G221000 Sobic006G221000 Sobic001G303200--Sobic006G221000 Sobic006G090100 Sobic006G090100 Sobic001G303200--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic001G303200--Sobic003G094100 Sobic001G168250--Sobic003G160200 Sobic001G168250--Sobic008G130000 Sobic001G168250--Sobic002G193800 Sobic004G274100 Sobic004G274100 Sobic001G168250--Sobic004G274100 Sobic001G168250--Sobic010G176200 Sobic001G168250--Sobic009G113800 Sobic001G308200 Sobic001G308200 Sobic001G168250--Sobic001G308200 Sobic001G168250--Sobic009G237100 Sobic001G168250--Sobic007G123500 Sobic003G191700 Sobic003G191700 Sobic003G229300--Sobic003G191700 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic004G042200 Sobic004G042200 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic001G359300 Sobic001G359300 Sobic001G333800--Sobic001G359300 Sobic005G106600 Sobic005G106600 Sobic001G333800--Sobic005G106600 Sobic009G093100 Sobic009G093100 Sobic001G333800--Sobic009G093100 Sobic001G333800--Sobic006G090100 Sobic001G333800--Sobic001G303200 Sobic003G220100 Sobic003G220100 Sobic001G333800--Sobic003G220100 Sobic001G333800--Sobic009G038900 Sobic009G073900 Sobic009G073900 Sobic001G333800--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic001G333800--Sobic001G077300
Octagon: transcription factors


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