Gene annotation
Transcriptome id Sobic.010G002700.2,Sobic.010G002700.1,Sobic.010G002700.3
Synonym Sb10g000445
Functional annotation expressed protein
UniProt A0A1W0VQW9 , A0A194YGL6 , A0A1W0VQX2
Pfam PF12576
Panther DB PTHR33645 PTHR33645:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46915 : Protein of unknown function (DUF3754)
RAP-DB (Rice) LOC_Os06g01460.1 : expressed protein
MaizeGDB (Corn) Zm00025a041159
Brachypodium KQK20056 , KQK20057
Barley HORVU7Hr1G000120.6 , HORVU7Hr1G000120.7 , HORVU7Hr1G000120.4 , HORVU7Hr1G000120.5 , HORVU7Hr1G000120.2 , HORVU7Hr1G000120.3 , HORVU7Hr1G000120.1 , HORVU7Hr1G000120.8 , HORVU7Hr1G000120.9 , HORVU7Hr1G000120.18 , HORVU7Hr1G000120.14 , HORVU7Hr1G000120.15 , HORVU7Hr1G000120.16 , HORVU7Hr1G000120.17 , HORVU7Hr1G000120.10 , HORVU7Hr1G000120.11 , HORVU7Hr1G000120.12 , HORVU7Hr1G000120.21 , HORVU7Hr1G000120.20 , HORVU7Hr1G000120.23 , HORVU7Hr1G000120.25 , HORVU7Hr1G000120.24 , HORVU7Hr1G000120.26 , HORVU7Hr1G000120.29 , HORVU7Hr1G000120.28 , HORVU7Hr1G000120.19 , HORVU7Hr1G000120.36 , HORVU7Hr1G000120.37 , HORVU7Hr1G000120.34 , HORVU7Hr1G000120.35 , HORVU7Hr1G000120.32 , HORVU7Hr1G000120.33 , HORVU7Hr1G000120.30 , HORVU7Hr1G000120.31 , HORVU7Hr1G000120.38 , HORVU7Hr1G000120.39
Wheat TraesCS7A02G008600 , TraesCS7D02G008300 , TraesCS7D02G008300 , TraesCS4A02G486400 , TraesCS7A02G008600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
3 Sobic.005G118400 expressed protein -
4 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
5 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
6 Sobic.007G136200 expressed protein -
7 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
8 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
9 Sobic.001G530900 expressed protein -
10 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
11 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
12 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
13 Sobic.003G220100 - -
14 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
15 Sobic.001G468700 expressed protein -
16 Sobic.001G504400 expressed protein -
17 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
18 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
19 Sobic.009G121000 expressed protein -
20 Sobic.006G142600 lipase class 3 family protein, putative, expressed -


Gene co-expression network
sample Sobic010G002700 Sobic010G002700 Sobic003G017100 Sobic003G017100 Sobic010G002700--Sobic003G017100 Sobic001G169900 Sobic001G169900 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G043800 Sobic010G043800 Sobic010G002700--Sobic010G043800 Sobic001G378100 Sobic001G378100 Sobic010G002700--Sobic001G378100 Sobic007G136200 Sobic007G136200 Sobic010G002700--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic010G002700--Sobic003G276300 Sobic001G198100 Sobic001G198100 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic002G006600 Sobic002G006600 Sobic003G017100--Sobic002G006600 Sobic003G017100--Sobic010G002700 Sobic003G017100--Sobic001G198100 Sobic003G017100--Sobic003G276300 Sobic003G017100--Sobic001G169900 Sobic003G313300 Sobic003G313300 Sobic003G017100--Sobic003G313300 Sobic001G468700 Sobic001G468700 Sobic003G017100--Sobic001G468700 Sobic003G247400 Sobic003G247400 Sobic003G017100--Sobic003G247400 Sobic003G191700 Sobic003G191700 Sobic003G017100--Sobic003G191700 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic005G118400--Sobic010G002700 Sobic005G068700 Sobic005G068700 Sobic005G118400--Sobic005G068700 Sobic005G118400--Sobic001G378100 Sobic001G540600 Sobic001G540600 Sobic005G118400--Sobic001G540600 Sobic003G185900 Sobic003G185900 Sobic005G118400--Sobic003G185900 Sobic001G504400 Sobic001G504400 Sobic005G118400--Sobic001G504400 Sobic008G033000 Sobic008G033000 Sobic005G118400--Sobic008G033000 Sobic005G118400--Sobic001G530900 Sobic002G056500 Sobic002G056500 Sobic005G118400--Sobic002G056500 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G077300 Sobic001G077300 Sobic001G378100--Sobic001G077300 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic007G136200--Sobic006G158100 Sobic007G136200--Sobic010G043800 Sobic007G136200--Sobic001G504400 Sobic007G136200--Sobic010G002700 Sobic007G136200--Sobic007G103400 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic007G136200--Sobic001G378100 Sobic003G276300--Sobic010G002700 Sobic003G276300--Sobic001G017300 Sobic003G276300--Sobic003G017100 Sobic003G276300--Sobic003G247400 Sobic003G276300--Sobic006G142600 Sobic003G276300--Sobic001G169900 Sobic003G276300--Sobic010G043800 Sobic003G276300--Sobic001G198100 Sobic003G276300--Sobic007G136200 Sobic001G198100--Sobic003G017100 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic001G198100--Sobic010G002700 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic001G198100--Sobic009G121000 Sobic001G198100--Sobic003G276300 Sobic001G198100--Sobic006G142600 Sobic001G530900--Sobic010G002700 Sobic009G215500 Sobic009G215500 Sobic001G530900--Sobic009G215500 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic001G530900--Sobic005G118400 Sobic005G084500 Sobic005G084500 Sobic001G530900--Sobic005G084500 Sobic003G332700 Sobic003G332700 Sobic001G530900--Sobic003G332700 Sobic001G465700 Sobic001G465700 Sobic001G530900--Sobic001G465700 Sobic003G217700 Sobic003G217700 Sobic001G530900--Sobic003G217700
Octagon: transcription factors


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