Gene annotation
Transcriptome id Sobic.003G247400.2
Synonym Sb03g030380
Functional annotation OsCttP1 - Putative C-terminal processing peptidase homologue, expressed
UniProt A0A1W0VYR8
Pfam PF03572
Panther DB PTHR32060 PTHR32060:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G46390 : Peptidase S41 family protein
RAP-DB (Rice) LOC_Os01g47450.1 : OsCttP1 - Putative C-terminal processing peptidase homologue, expressed
MaizeGDB (Corn) Zm00025a038738
Brachypodium KQK09068
Barley HORVU3Hr1G060150.28 , HORVU3Hr1G060150.29 , HORVU3Hr1G060150.24 , HORVU3Hr1G060150.25 , HORVU3Hr1G060150.26 , HORVU3Hr1G060150.27 , HORVU3Hr1G060150.20 , HORVU3Hr1G060150.21 , HORVU3Hr1G060150.22 , HORVU3Hr1G060150.23 , HORVU3Hr1G060150.4 , HORVU3Hr1G060150.7 , HORVU3Hr1G060150.6 , HORVU3Hr1G060150.1 , HORVU3Hr1G060150.3 , HORVU3Hr1G060150.2 , HORVU3Hr1G060150.9 , HORVU3Hr1G060150.8 , HORVU3Hr1G060150.38 , HORVU3Hr1G060150.37 , HORVU3Hr1G060150.36 , HORVU3Hr1G060150.35 , HORVU3Hr1G060150.34 , HORVU3Hr1G060150.33 , HORVU3Hr1G060150.32 , HORVU3Hr1G060150.31 , HORVU3Hr1G060150.30 , HORVU3Hr1G060150.11 , HORVU3Hr1G060150.10 , HORVU3Hr1G060150.12 , HORVU3Hr1G060150.15 , HORVU3Hr1G060150.14 , HORVU3Hr1G060150.17 , HORVU3Hr1G060150.16 , HORVU3Hr1G060150.19 , HORVU3Hr1G060150.18
Wheat TraesCS3B02G269700 , TraesCS3B02G269700 , TraesCS3B02G269700 , TraesCS3D02G241700 , TraesCS3D02G241700 , TraesCS3A02G241500 , TraesCS3A02G241500
Populus -


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cDNA sequences
Sobic.003G247400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
2 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
3 Sobic.009G121000 expressed protein -
4 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
5 Sobic.010G002700 expressed protein -
6 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
8 Sobic.007G136200 expressed protein -
9 Sobic.001G468700 expressed protein -
10 Sobic.002G347600 pentatricopeptide containing protein, putative, expressed -
11 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
12 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
13 Sobic.001G516901 - -
14 Sobic.004G328400 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
15 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
16 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
17 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.001G530900 expressed protein -
19 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
20 Sobic.008G167700 expressed protein -


Gene co-expression network
sample Sobic003G247400 Sobic003G247400 Sobic001G198100 Sobic001G198100 Sobic003G247400--Sobic001G198100 Sobic003G276300 Sobic003G276300 Sobic003G247400--Sobic003G276300 Sobic009G121000 Sobic009G121000 Sobic003G247400--Sobic009G121000 Sobic010G043800 Sobic010G043800 Sobic003G247400--Sobic010G043800 Sobic010G002700 Sobic010G002700 Sobic003G247400--Sobic010G002700 Sobic003G017100 Sobic003G017100 Sobic003G247400--Sobic003G017100 Sobic007G185700 Sobic007G185700 Sobic003G247400--Sobic007G185700 Sobic007G136200 Sobic007G136200 Sobic003G247400--Sobic007G136200 Sobic001G468700 Sobic001G468700 Sobic003G247400--Sobic001G468700 Sobic001G198100--Sobic003G017100 Sobic001G198100--Sobic003G247400 Sobic001G169900 Sobic001G169900 Sobic001G198100--Sobic001G169900 Sobic001G198100--Sobic010G002700 Sobic002G006600 Sobic002G006600 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic001G198100--Sobic009G121000 Sobic001G198100--Sobic003G276300 Sobic006G142600 Sobic006G142600 Sobic001G198100--Sobic006G142600 Sobic003G276300--Sobic010G002700 Sobic001G017300 Sobic001G017300 Sobic003G276300--Sobic001G017300 Sobic003G276300--Sobic003G017100 Sobic003G276300--Sobic003G247400 Sobic003G276300--Sobic006G142600 Sobic003G276300--Sobic001G169900 Sobic003G276300--Sobic010G043800 Sobic003G276300--Sobic001G198100 Sobic003G276300--Sobic007G136200 Sobic009G121000--Sobic010G043800 Sobic005G063000 Sobic005G063000 Sobic009G121000--Sobic005G063000 Sobic009G121000--Sobic003G247400 Sobic009G121000--Sobic001G198100 Sobic009G121000--Sobic006G142600 Sobic003G160800 Sobic003G160800 Sobic009G121000--Sobic003G160800 Sobic009G121000--Sobic003G276300 Sobic007G103400 Sobic007G103400 Sobic009G121000--Sobic007G103400 Sobic009G121000--Sobic010G002700 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic010G043800--Sobic006G158100 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic001G378100 Sobic001G378100 Sobic010G043800--Sobic001G378100 Sobic010G002700--Sobic003G017100 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G002700--Sobic010G043800 Sobic010G002700--Sobic001G378100 Sobic010G002700--Sobic007G136200 Sobic010G002700--Sobic003G276300 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic003G017100--Sobic002G006600 Sobic003G017100--Sobic010G002700 Sobic003G017100--Sobic001G198100 Sobic003G017100--Sobic003G276300 Sobic003G017100--Sobic001G169900 Sobic003G313300 Sobic003G313300 Sobic003G017100--Sobic003G313300 Sobic003G017100--Sobic001G468700 Sobic003G017100--Sobic003G247400 Sobic003G191700 Sobic003G191700 Sobic003G017100--Sobic003G191700 Sobic001G054100 Sobic001G054100 Sobic007G185700--Sobic001G054100 Sobic003G234900 Sobic003G234900 Sobic007G185700--Sobic003G234900 Sobic003G141100 Sobic003G141100 Sobic007G185700--Sobic003G141100 Sobic001G500600 Sobic001G500600 Sobic007G185700--Sobic001G500600 Sobic003G217700 Sobic003G217700 Sobic007G185700--Sobic003G217700 Sobic007G185700--Sobic001G530900 Sobic003G352500 Sobic003G352500 Sobic007G185700--Sobic003G352500 Sobic001G261573 Sobic001G261573 Sobic007G185700--Sobic001G261573 Sobic005G231100 Sobic005G231100 Sobic007G185700--Sobic005G231100 Sobic007G136200--Sobic006G158100 Sobic007G136200--Sobic010G043800 Sobic007G136200--Sobic001G504400 Sobic007G136200--Sobic010G002700 Sobic007G136200--Sobic007G103400 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic007G136200--Sobic001G378100 Sobic001G468700--Sobic010G002700 Sobic001G468700--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic001G468700--Sobic004G028500 Sobic001G468700--Sobic001G017300 Sobic001G468700--Sobic009G121000 Sobic001G468700--Sobic003G247400 Sobic001G468700--Sobic003G313300 Sobic001G468700--Sobic003G276300 Sobic003G004200 Sobic003G004200 Sobic001G468700--Sobic003G004200
Octagon: transcription factors


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